too-many-cells 0.1.0.0 → 0.1.0.1
raw patch · 1 files changed
+128/−125 lines, 1 filesdep ~SVGFontsdep ~aesondep ~base
Dependency ranges changed: SVGFonts, aeson, base, birch-beer, bytestring, cassava, colour, containers, deepseq, diagrams, diagrams-cairo, diagrams-graphviz, diagrams-lib, differential, directory, diversity, fgl, filepath, find-clumpiness, foldl, graphviz, hierarchical-clustering, hierarchical-spectral-clustering, hmatrix, inline-r, lens, managed, matrix-market-attoparsec, mltool, modularity, mtl, optparse-generic, palette, parallel, plots, safe, scientific, sparse-linear-algebra, spectral-clustering, split, statistics, streaming, streaming-bytestring, streaming-cassava, streaming-utils, streaming-with, terminal-progress-bar, text, text-show, transformers, vector, vector-algorithms
Files
- too-many-cells.cabal +128/−125
too-many-cells.cabal view
@@ -1,129 +1,132 @@-name: too-many-cells-version: 0.1.0.0-synopsis: Cluster single cells and analyze cell clade relationships.-description: Different methods to cluster and analyze single cell data with diversity indices and differential expression.-homepage: http://github.com/GregorySchwartz/too-many-cells#readme-license: GPL-3-license-file: LICENSE-author: Gregory W. Schwartz-maintainer: gsch@pennmedicine.upenn.edu-copyright: 2018 Gregory W. Schwartz-category: Bioinformatics-build-type: Simple--- extra-source-files:-cabal-version: >=1.10+cabal-version: >=1.10+name: too-many-cells+version: 0.1.0.1+license: GPL-3+license-file: LICENSE+copyright: 2018 Gregory W. Schwartz+maintainer: gsch@pennmedicine.upenn.edu+author: Gregory W. Schwartz+homepage: http://github.com/GregorySchwartz/too-many-cells#readme+synopsis: Cluster single cells and analyze cell clade relationships.+description:+ Different methods to cluster and analyze single cell data with diversity indices and differential expression.+category: Bioinformatics+build-type: Simple +source-repository head+ type: git+ location: https://github.com/GregorySchwartz/too-many-cells+ library- hs-source-dirs: src- exposed-modules: TooManyCells.Diversity.Diversity- , TooManyCells.Differential.Differential- , TooManyCells.Differential.Types- , TooManyCells.Diversity.Load- , TooManyCells.Diversity.Plot- , TooManyCells.Diversity.Types- , TooManyCells.File.Types- , TooManyCells.MakeTree.Adjacency- , TooManyCells.MakeTree.Clumpiness- , TooManyCells.MakeTree.Cluster- , TooManyCells.MakeTree.Load- , TooManyCells.MakeTree.Plot- , TooManyCells.MakeTree.Print- , TooManyCells.MakeTree.Types- , TooManyCells.Matrix.Load- , TooManyCells.Matrix.Preprocess- , TooManyCells.Matrix.Types- , TooManyCells.Matrix.Utility- , TooManyCells.Paths.Distance- , TooManyCells.Paths.Plot- , TooManyCells.Paths.Types- build-depends: base >= 4.7 && < 5- , aeson- , birch-beer- , bytestring- , cassava- , colour- , containers- , deepseq- , diagrams- , diagrams-lib- , diagrams-cairo- , diagrams-graphviz- , differential- , directory- , diversity- , find-clumpiness- , filepath- , fgl- , foldl- , graphviz- , hierarchical-clustering- , hierarchical-spectral-clustering- , hmatrix- , inline-r- , lens- , managed- , matrix-market-attoparsec- , mltool- , modularity- , mtl- , palette- , parallel- , plots- , safe- , scientific- , sparse-linear-algebra- , split- , statistics- , streaming- , streaming-bytestring- , streaming-cassava- , streaming-with- , SVGFonts- , text- , text-show- , vector- , vector-algorithms- ghc-options: -O2- default-language: Haskell2010+ exposed-modules:+ TooManyCells.Diversity.Diversity+ TooManyCells.Differential.Differential+ TooManyCells.Differential.Types+ TooManyCells.Diversity.Load+ TooManyCells.Diversity.Plot+ TooManyCells.Diversity.Types+ TooManyCells.File.Types+ TooManyCells.MakeTree.Adjacency+ TooManyCells.MakeTree.Clumpiness+ TooManyCells.MakeTree.Cluster+ TooManyCells.MakeTree.Load+ TooManyCells.MakeTree.Plot+ TooManyCells.MakeTree.Print+ TooManyCells.MakeTree.Types+ TooManyCells.Matrix.Load+ TooManyCells.Matrix.Preprocess+ TooManyCells.Matrix.Types+ TooManyCells.Matrix.Utility+ TooManyCells.Paths.Distance+ TooManyCells.Paths.Plot+ TooManyCells.Paths.Types+ hs-source-dirs: src+ default-language: Haskell2010+ ghc-options: -O2+ build-depends:+ base >=4.7 && <5,+ aeson >=1.4.0.0,+ birch-beer >=0.1.0.0,+ bytestring >=0.10.8.2,+ cassava >=0.5.1.0,+ colour >=2.3.4,+ containers >=0.5.11.0,+ deepseq >=1.4.3.0,+ diagrams >=1.4,+ diagrams-lib >=1.4.2.3,+ diagrams-cairo >=1.4.1,+ diagrams-graphviz >=1.4.1,+ differential >=0.1.1.0,+ directory >=1.3.1.5,+ diversity >=0.8.1.0,+ find-clumpiness >=0.2.3.1,+ filepath >=1.4.2,+ fgl >=5.6.0.0,+ foldl >=1.4.2,+ graphviz >=2999.20.0.2,+ hierarchical-clustering >=0.4.6,+ hierarchical-spectral-clustering >=0.2.1.0,+ hmatrix >=0.19.0.0,+ inline-r >=0.9.2,+ lens >=4.16.1,+ managed >=1.0.6,+ matrix-market-attoparsec >=0.1.0.8,+ mltool >=0.2.0.1,+ modularity >=0.2.0.3,+ mtl >=2.2.2,+ palette >=0.3.0.1,+ parallel >=3.2.1.1,+ plots >=0.1.0.2,+ safe >=0.3.17,+ scientific >=0.3.6.2,+ sparse-linear-algebra >=0.3.1,+ split >=0.2.3.3,+ statistics >=0.14.0.2,+ streaming >=0.2.1.0,+ streaming-bytestring >=0.1.6,+ streaming-cassava >=0.1.0.1,+ streaming-with >=0.2.2.1,+ SVGFonts >=1.6.0.3,+ text >=1.2.3.0,+ text-show >=3.7.4,+ vector >=0.12.0.1,+ vector-algorithms >=0.7.0.1 executable too-many-cells- hs-source-dirs: app- main-is: Main.hs- ghc-options: -threaded -rtsopts -O2- build-depends: base- , too-many-cells- , aeson- , birch-beer- , bytestring- , cassava- , colour- , containers- , diagrams-lib- , diagrams-cairo- , directory- , fgl- , filepath- , find-clumpiness- , graphviz- , hierarchical-spectral-clustering- , inline-r- , lens- , matrix-market-attoparsec- , mtl- , optparse-generic- , palette- , plots- , spectral-clustering- , streaming- , streaming-bytestring- , streaming-utils- , terminal-progress-bar- , text- , text-show- , transformers- , vector- default-language: Haskell2010--source-repository head- type: git- location: https://github.com/GregorySchwartz/too-many-cells+ main-is: Main.hs+ hs-source-dirs: app+ default-language: Haskell2010+ ghc-options: -threaded -rtsopts -O2+ build-depends:+ base >=4.11.1.0,+ too-many-cells -any,+ aeson >=1.4.0.0,+ birch-beer >=0.1.0.0,+ bytestring >=0.10.8.2,+ cassava >=0.5.1.0,+ colour >=2.3.4,+ containers >=0.5.11.0,+ diagrams-lib >=1.4.2.3,+ diagrams-cairo >=1.4.1,+ directory >=1.3.1.5,+ fgl >=5.6.0.0,+ filepath >=1.4.2,+ find-clumpiness >=0.2.3.1,+ graphviz >=2999.20.0.2,+ hierarchical-spectral-clustering >=0.2.1.0,+ inline-r >=0.9.2,+ lens >=4.16.1,+ matrix-market-attoparsec >=0.1.0.8,+ mtl >=2.2.2,+ optparse-generic >=1.3.0,+ palette >=0.3.0.1,+ plots >=0.1.0.2,+ spectral-clustering >=0.2.1.2,+ streaming >=0.2.1.0,+ streaming-bytestring >=0.1.6,+ streaming-utils >=0.1.4.7,+ terminal-progress-bar >=0.2,+ text >=1.2.3.0,+ text-show >=3.7.4,+ transformers >=0.5.5.0,+ vector >=0.12.0.1