neet-0.1.0.0: src/Neet/Network.hs
{-
Copyright (C) 2015 Leon Medvinsky
This program is free software; you can redistribute it and/or
modify it under the terms of the GNU General Public License
as published by the Free Software Foundation; either version 3
of the License, or (at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License
along with this program; if not, write to the Free Software
Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA.
-}
{-|
Module : Neet.Network
Description : Networks produced from NEAT Genomes
Copyright : (c) Leon Medvinsky, 2015
License : GPL-3
Maintainer : lmedvinsky@hotmail.com
Stability : experimental
Portability : ghc
-}
{-# LANGUAGE RecordWildCards #-}
module Neet.Network (
-- * Sigmoid
modSig
-- * Network
, Network(..)
-- ** Neuron
, Neuron(..)
-- ** Construction
, mkPhenotype
-- ** Updates
, stepNeuron
, stepNetwork
, snapshot
-- ** Output
, getOutput
) where
import Data.Map (Map)
import Data.Set (Set)
import qualified Data.Set as S
import qualified Data.Map as M
import Data.List (foldl')
import Neet.Genome
-- | Modified sigmoid function from the original NEAT paper
modSig :: Double -> Double
modSig d = 1 / (1 + exp (-4.9 * d))
-- | A single neuron
data Neuron =
Neuron { activation :: Double -- ^ The current activation
, connections :: Map NodeId Double -- ^ The inputs to this Neuron
, yHint :: Rational -- ^ Visualization height
}
deriving (Show)
-- | Sparse recurrent network, like those made by NEAT
data Network =
Network { netInputs :: [NodeId] -- ^ Which nodes are inputs
, netOutputs :: [NodeId] -- ^ Which nodes are outputs
, netState :: Map NodeId Neuron
, netDepth :: Int -- ^ Upper bound on depth
}
deriving (Show)
-- | Takes the previous step's activations and current inputs and gives a
-- function to update a neuron.
stepNeuron :: Map NodeId Double -> Neuron -> Neuron
stepNeuron acts (Neuron _ conns yh) = Neuron (modSig weightedSum) conns yh
where oneFactor nId w = (acts M.! nId) * w
weightedSum = M.foldlWithKey' (\acc k w -> acc + oneFactor k w) 0 conns
-- | Steps a network one step. Takes the network and the current input, minus
-- the bias.
stepNetwork :: Network -> [Double] -> Network
stepNetwork net@Network{..} ins = net { netState = newNeurons }
where pairs = zip netInputs (ins ++ [1])
acts = M.map activation netState
-- | The previous state, except updated to have new inputs
modState = foldl' (flip $ uncurry M.insert) acts pairs
newNeurons = M.map (stepNeuron modState) netState
-- | Steps a network for at least its depth
snapshot :: Network -> [Double] -> Network
snapshot net = go (netDepth net - 1)
where go 0 _ = net
go n ds = stepNetwork (go (n - 1) ds) ds
mkPhenotype :: Genome -> Network
mkPhenotype Genome{..} = (M.foldl' addConn nodeHusk connGenes) { netInputs = ins
, netOutputs = outs
, netDepth = dep }
where addNode n@(Network _ _ s _) nId (NodeGene _ yh) =
n { netState = M.insert nId (Neuron 0 M.empty yh) s
}
ins = M.keys . M.filter (\ng -> nodeType ng == Input) $ nodeGenes
outs = M.keys . M.filter (\ng -> nodeType ng == Output) $ nodeGenes
-- | Network without connections added
nodeHusk = M.foldlWithKey' addNode (Network [] [] M.empty 0) nodeGenes
depthSet :: Set Rational
depthSet = M.foldl' (flip S.insert) S.empty $ M.map Neet.Genome.yHint nodeGenes
dep = S.size depthSet
addConn2Node nId w (Neuron a cs yh) = Neuron a (M.insert nId w cs) yh
addConn net@Network{ netState = s } ConnGene{..}
| not connEnabled = net
| otherwise =
let newS = M.adjust (addConn2Node connIn connWeight) connOut s
in net { netState = newS }
-- | Gets the output of the current state
getOutput :: Network -> [Double]
getOutput Network{..} = map (activation . (netState M.!)) netOutputs