mcmc-0.6.2.0: src/Mcmc/Internal/Gamma.hs
-- |
-- Module : Mcmc.Internal.Gamma
-- Description : Generalized gamma function for automatic differentiation
-- Copyright : (c) 2021 Dominik Schrempf
-- License : GPL-3.0-or-later
--
-- Maintainer : dominik.schrempf@gmail.com
-- Stability : experimental
-- Portability : portable
--
-- Creation date: Tue Jul 13 12:53:09 2021.
--
-- The code is taken from "Numeric.SpecFunctions".
module Mcmc.Internal.Gamma
( logGammaG,
)
where
import qualified Data.Vector as VB
import Numeric.Polynomial
mSqrtEps :: RealFloat a => a
mSqrtEps = 1.4901161193847656e-8
mEulerMascheroni :: RealFloat a => a
mEulerMascheroni = 0.5772156649015328606065121
-- | See 'Numeric.SpecFunctions.logGamma'.
logGammaG :: RealFloat a => a -> a
logGammaG z
| z <= 0 = 1 / 0
| z < mSqrtEps = log (1 / z - mEulerMascheroni)
| z < 0.5 = lgamma1_15 z (z - 1) - log z
| z < 1 = lgamma15_2 z (z - 1) - log z
| z <= 1.5 = lgamma1_15 (z - 1) (z - 2)
| z < 2 = lgamma15_2 (z - 1) (z - 2)
| z < 15 = lgammaSmall z
| otherwise = lanczosApprox z
{-# SPECIALIZE logGammaG :: Double -> Double #-}
lgamma1_15 :: RealFloat a => a -> a -> a
lgamma1_15 zm1 zm2 =
r * y + r
* ( evaluatePolynomial zm1 tableLogGamma_1_15P
/ evaluatePolynomial zm1 tableLogGamma_1_15Q
)
where
r = zm1 * zm2
y = 0.52815341949462890625
tableLogGamma_1_15P :: RealFloat a => VB.Vector a
tableLogGamma_1_15P =
VB.fromList
[ 0.490622454069039543534e-1,
-0.969117530159521214579e-1,
-0.414983358359495381969e0,
-0.406567124211938417342e0,
-0.158413586390692192217e0,
-0.240149820648571559892e-1,
-0.100346687696279557415e-2
]
{-# NOINLINE tableLogGamma_1_15P #-}
tableLogGamma_1_15Q :: RealFloat a => VB.Vector a
tableLogGamma_1_15Q =
VB.fromList
[ 1,
0.302349829846463038743e1,
0.348739585360723852576e1,
0.191415588274426679201e1,
0.507137738614363510846e0,
0.577039722690451849648e-1,
0.195768102601107189171e-2
]
{-# NOINLINE tableLogGamma_1_15Q #-}
lgamma15_2 :: RealFloat a => a -> a -> a
lgamma15_2 zm1 zm2 =
r * y + r
* ( evaluatePolynomial (-zm2) tableLogGamma_15_2P
/ evaluatePolynomial (-zm2) tableLogGamma_15_2Q
)
where
r = zm1 * zm2
y = 0.452017307281494140625
tableLogGamma_15_2P :: RealFloat a => VB.Vector a
tableLogGamma_15_2P =
VB.fromList
[ -0.292329721830270012337e-1,
0.144216267757192309184e0,
-0.142440390738631274135e0,
0.542809694055053558157e-1,
-0.850535976868336437746e-2,
0.431171342679297331241e-3
]
{-# NOINLINE tableLogGamma_15_2P #-}
tableLogGamma_15_2Q :: RealFloat a => VB.Vector a
tableLogGamma_15_2Q =
VB.fromList
[ 1,
-0.150169356054485044494e1,
0.846973248876495016101e0,
-0.220095151814995745555e0,
0.25582797155975869989e-1,
-0.100666795539143372762e-2,
-0.827193521891290553639e-6
]
{-# NOINLINE tableLogGamma_15_2Q #-}
lgammaSmall :: RealFloat a => a -> a
lgammaSmall = go 0
where
go acc z
| z < 3 = acc + lgamma2_3 z
| otherwise = go (acc + log zm1) zm1
where
zm1 = z - 1
lgamma2_3 :: RealFloat a => a -> a
lgamma2_3 z =
r * y + r
* ( evaluatePolynomial zm2 tableLogGamma_2_3P
/ evaluatePolynomial zm2 tableLogGamma_2_3Q
)
where
r = zm2 * (z + 1)
zm2 = z - 2
y = 0.158963680267333984375e0
tableLogGamma_2_3P :: RealFloat a => VB.Vector a
tableLogGamma_2_3P =
VB.fromList
[ -0.180355685678449379109e-1,
0.25126649619989678683e-1,
0.494103151567532234274e-1,
0.172491608709613993966e-1,
-0.259453563205438108893e-3,
-0.541009869215204396339e-3,
-0.324588649825948492091e-4
]
{-# NOINLINE tableLogGamma_2_3P #-}
tableLogGamma_2_3Q :: RealFloat a => VB.Vector a
tableLogGamma_2_3Q =
VB.fromList
[ 1,
0.196202987197795200688e1,
0.148019669424231326694e1,
0.541391432071720958364e0,
0.988504251128010129477e-1,
0.82130967464889339326e-2,
0.224936291922115757597e-3,
-0.223352763208617092964e-6
]
{-# NOINLINE tableLogGamma_2_3Q #-}
lanczosApprox :: RealFloat a => a -> a
lanczosApprox z =
(log (z + g - 0.5) - 1) * (z - 0.5)
+ log (evalRatio tableLanczos z)
where
g = 6.024680040776729583740234375
tableLanczos :: RealFloat a => VB.Vector (a, a)
tableLanczos =
VB.fromList
[ (56906521.91347156388090791033559122686859, 0),
(103794043.1163445451906271053616070238554, 39916800),
(86363131.28813859145546927288977868422342, 120543840),
(43338889.32467613834773723740590533316085, 150917976),
(14605578.08768506808414169982791359218571, 105258076),
(3481712.15498064590882071018964774556468, 45995730),
(601859.6171681098786670226533699352302507, 13339535),
(75999.29304014542649875303443598909137092, 2637558),
(6955.999602515376140356310115515198987526, 357423),
(449.9445569063168119446858607650988409623, 32670),
(19.51992788247617482847860966235652136208, 1925),
(0.5098416655656676188125178644804694509993, 66),
(0.006061842346248906525783753964555936883222, 1)
]
{-# NOINLINE tableLanczos #-}
data L a = L !a !a
evalRatio :: RealFloat a => VB.Vector (a, a) -> a -> a
evalRatio coef x
| x > 1 = fini $ VB.foldl' stepL (L 0 0) coef
| otherwise = fini $ VB.foldr' stepR (L 0 0) coef
where
fini (L num den) = num / den
stepR (a, b) (L num den) = L (num * x + a) (den * x + b)
stepL (L num den) (a, b) = L (num * rx + a) (den * rx + b)
rx = recip x