lapack-0.1: src/Numeric/LAPACK/Eigen/Triangular.hs
{-# LANGUAGE TypeFamilies #-}
module Numeric.LAPACK.Eigen.Triangular (
values,
decompose,
) where
import qualified Numeric.LAPACK.Matrix.Triangular as Triangular
import qualified Numeric.LAPACK.Matrix.Shape.Private as MatrixShape
import Numeric.LAPACK.Matrix.Triangular.Private
(unpackZero, pack, unpackToTemp, fillTriangle,
forPointers, rowMajorPointers)
import Numeric.LAPACK.Matrix.Triangular (Triangular)
import Numeric.LAPACK.Matrix.Shape.Private
(Order(ColumnMajor,RowMajor), caseUplo, uploOrder, triangleSize)
import Numeric.LAPACK.Vector (Vector)
import Numeric.LAPACK.Private (zero, lacgv, allocArray)
import qualified Numeric.LAPACK.FFI.Complex as LapackComplex
import qualified Numeric.LAPACK.FFI.Real as LapackReal
import qualified Numeric.BLAS.FFI.Generic as BlasGen
import qualified Numeric.Netlib.Utility as Call
import qualified Numeric.Netlib.Class as Class
import qualified Data.Array.Comfort.Shape as Shape
import Data.Array.Comfort.Storable.Internal (Array(Array))
import System.IO.Unsafe (unsafePerformIO)
import Foreign.Marshal.Alloc (alloca)
import Foreign.C.Types (CInt, CChar)
import Foreign.Ptr (Ptr, nullPtr)
import Foreign.Storable (peek)
import Control.Monad.Trans.Cont (evalContT)
import Control.Monad.IO.Class (liftIO)
import Control.Applicative ((<$>))
import Text.Printf (printf)
import Data.Complex (Complex)
values ::
(MatrixShape.Uplo uplo, Shape.C sh, Class.Floating a) =>
Triangular uplo sh a -> Vector sh a
values = Triangular.getDiagonal
{- |
@(vr,d,vlAdj) = TriEigen.decompose a@
Counterintuitively, @vr@ contains the right eigenvectors as columns
and @vlAdj@ contains the left conjugated eigenvectors as rows.
The idea is to provide a decomposition of @a@.
If @a@ is diagonalizable, then @vr@ and @vlAdj@
are almost inverse to each other.
More precisely, @vlAdj \<#\> vr@ is a diagonal matrix.
This is because the eigenvectors are not normalized.
With the following scaling, the decomposition becomes perfect:
> let scal = Array.map recip $ getDiagonal $ vlAdj <#> vr
> a == vr <#> diagonal d <#> diagonal scal <#> vlAdj
If @a@ is non-diagonalizable
then some columns of @vr@ and corresponding rows of @vlAdj@ are left zero
and the above property does not hold.
-}
decompose ::
(MatrixShape.Uplo uplo, Shape.C sh, Class.Floating a) =>
Triangular uplo sh a ->
(Triangular uplo sh a, Vector sh a, Triangular uplo sh a)
decompose a =
let (vr,vl) = decomposePlain a
in (vr, values a, vl)
decomposePlain ::
(MatrixShape.Uplo uplo, Shape.C sh, Class.Floating a) =>
Triangular uplo sh a -> (Triangular uplo sh a, Triangular uplo sh a)
decomposePlain (Array (MatrixShape.Triangular uplo order sh) a) =
unsafePerformIO $ do
let n = Shape.size sh
let n2 = n*n
let triSize = triangleSize n
evalContT $ do
sidePtr <- Call.char 'B'
howManyPtr <- Call.char 'A'
let selectPtr = nullPtr
let unpk =
case uploOrder uplo order of
ColumnMajor -> unpackZero ColumnMajor
RowMajor -> unpackZeroRowMajor
aPtr <- unpackToTemp unpk n a
ldaPtr <- Call.cint n
vlPtr <- Call.allocaArray n2
vrPtr <- Call.allocaArray n2
mmPtr <- Call.cint n
mPtr <- Call.alloca
liftIO $ withInfo "trevc" $
trevc sidePtr howManyPtr selectPtr n
aPtr ldaPtr vlPtr ldaPtr vrPtr ldaPtr mmPtr mPtr
(vl,vlpPtr) <-
allocArray $
MatrixShape.Triangular uplo (uploOrder uplo RowMajor) sh
(vr,vrpPtr) <-
allocArray $
MatrixShape.Triangular uplo (uploOrder uplo ColumnMajor) sh
sizePtr <- Call.cint triSize
incPtr <- Call.cint 1
liftIO $ do
pack ColumnMajor n vrPtr vrpPtr
pack RowMajor n vlPtr vlpPtr
lacgv sizePtr vlpPtr incPtr
return $ caseUplo uplo (vl,vr) (vr,vl)
unpackZeroRowMajor :: Class.Floating a => Int -> Ptr a -> Ptr a -> IO ()
unpackZeroRowMajor n packedPtr fullPtr = do
fillTriangle zero RowMajor n fullPtr
unpackRowMajor n packedPtr fullPtr
unpackRowMajor :: Class.Floating a => Int -> Ptr a -> Ptr a -> IO ()
unpackRowMajor n packedPtr fullPtr = evalContT $ do
incxPtr <- Call.cint 1
incyPtr <- Call.cint n
liftIO $
forPointers (rowMajorPointers n fullPtr packedPtr) $
\nPtr (dstPtr,srcPtr) ->
BlasGen.copy nPtr srcPtr incxPtr dstPtr incyPtr
withInfo :: String -> (Ptr CInt -> IO ()) -> IO ()
withInfo name computation = alloca $ \infoPtr -> do
computation infoPtr
info <- fromIntegral <$> peek infoPtr
case compare info (0::Int) of
EQ -> return ()
LT -> error $ printf "%s: illegal value in %d-th argument" name (-info)
GT -> error $
printf "%s: %d off-diagonal elements not converging" name info
type TREVC_ a =
Ptr CChar -> Ptr CChar -> Ptr Bool ->
Int -> Ptr a -> Ptr CInt -> Ptr a -> Ptr CInt -> Ptr a -> Ptr CInt ->
Ptr CInt -> Ptr CInt -> Ptr CInt -> IO ()
newtype TREVC a = TREVC {getTREVC :: TREVC_ a}
trevc :: Class.Floating a => TREVC_ a
trevc =
getTREVC $
Class.switchFloating
(TREVC trevcReal) (TREVC trevcReal)
(TREVC trevcComplex) (TREVC trevcComplex)
trevcReal :: Class.Real a => TREVC_ a
trevcReal sidePtr howmnyPtr selectPtr n
tPtr ldtPtr vlPtr ldvlPtr vrPtr ldvrPtr mmPtr mPtr infoPtr =
evalContT $ do
nPtr <- Call.cint n
workPtr <- Call.allocaArray (3*n)
liftIO $
LapackReal.trevc sidePtr howmnyPtr selectPtr nPtr
tPtr ldtPtr vlPtr ldvlPtr vrPtr ldvrPtr mmPtr mPtr workPtr infoPtr
trevcComplex :: Class.Real a => TREVC_ (Complex a)
trevcComplex sidePtr howmnyPtr selectPtr n
tPtr ldtPtr vlPtr ldvlPtr vrPtr ldvrPtr mmPtr mPtr infoPtr =
evalContT $ do
nPtr <- Call.cint n
workPtr <- Call.allocaArray (2*n)
rworkPtr <- Call.allocaArray n
liftIO $
LapackComplex.trevc sidePtr howmnyPtr selectPtr nPtr
tPtr ldtPtr vlPtr ldvlPtr vrPtr ldvrPtr mmPtr mPtr
workPtr rworkPtr infoPtr