inline-r-0.10.5: src/Language/R/QQ.hs
-- |
-- Copyright: (C) 2013 Amgen, Inc.
--
{-# LANGUAGE DataKinds #-}
{-# LANGUAGE FlexibleInstances #-}
{-# LANGUAGE LambdaCase #-}
{-# LANGUAGE QuasiQuotes #-}
{-# LANGUAGE TemplateHaskell #-}
{-# LANGUAGE ViewPatterns #-}
{-# LANGUAGE GADTs #-}
{-# LANGUAGE ScopedTypeVariables #-}
{-# LANGUAGE CPP #-}
{-# LANGUAGE FlexibleContexts #-}
module Language.R.QQ
( r
, rsafe
) where
import Control.Memory.Region
import Control.Monad.R.Class
import qualified Data.Vector.SEXP as Vector
import qualified Foreign.R as R
import qualified Foreign.R.Parse as R
import Foreign.R (SEXP, SomeSEXP(..))
import Foreign.R.Error
import Internal.Error
import Language.R (eval)
import Language.R.Globals (nilValue, globalEnv)
import Language.R.GC (automaticSome)
import Language.R.HExp
import Language.R.Instance
import Language.R.Literal (mkSEXPIO)
import Language.Haskell.TH (Q, runIO)
import Language.Haskell.TH.Quote
import qualified Language.Haskell.TH.Syntax as TH
import qualified Language.Haskell.TH.Lib as TH
import Control.Concurrent (MVar, newMVar, takeMVar, putMVar)
import Control.Exception (throwIO)
import Control.Monad (unless)
import Data.List (intercalate, isSuffixOf)
import qualified Data.Set as Set
import Data.Set (Set)
import Foreign (alloca, peek)
import Foreign.C.String (withCString)
import System.IO.Unsafe (unsafePerformIO)
-------------------------------------------------------------------------------
-- Compile time Quasi-Quoter --
-------------------------------------------------------------------------------
-- | An R value, expressed as an R expression, in R's syntax.
r :: QuasiQuoter
r = QuasiQuoter
{ quoteExp = \txt -> [| eval =<< $(expQQ txt) |]
, quotePat = unimplemented "quotePat"
, quoteType = unimplemented "quoteType"
, quoteDec = unimplemented "quoteDec"
}
-- | Quasiquoter for pure R code (no side effects) and that does not depend on
-- the global environment (referential transparency). This means that all
-- symbols must appear qualified with a package namespace (whose bindings are
-- locked by default), the code must not affect R shared state in any way,
-- including the global environment, and must not perform I/O.
-- TODO some of the above invariants can be checked statically. Do so.
rsafe :: QuasiQuoter
rsafe = QuasiQuoter
{ quoteExp = \txt -> [| unsafePerformIO $ runRegion $ automaticSome =<< eval =<< $(expQQ txt) |]
, quotePat = unimplemented "quotePat"
, quoteType = unimplemented "quoteType"
, quoteDec = unimplemented "quoteDec"
}
-- | Serialize quasiquotes using a global lock, because the compiler is allowed
-- in theory to run them in parallel, yet the R runtime is not reentrant.
qqLock :: MVar ()
qqLock = unsafePerformIO $ newMVar ()
{-# NOINLINE qqLock #-}
parse :: String -> IO (R.SEXP V 'R.Expr)
parse txt = do
initialize defaultConfig
withCString txt $ \ctxt ->
R.withProtected (R.mkString ctxt) $ \rtxt ->
alloca $ \status -> do
R.withProtected (R.parseVector rtxt (-1) status (R.release nilValue)) $ \exprs -> do
rc <- fromIntegral <$> peek status
unless (R.PARSE_OK == toEnum rc) $
throwIO . RError $ "Parse error in: " ++ txt
return exprs
antiSuffix :: String
antiSuffix = "_hs"
isAnti :: SEXP s 'R.Char -> Bool
isAnti (hexp -> Char (Vector.toString -> name)) = antiSuffix `isSuffixOf` name
-- | Chop antiquotation variable names to get the corresponding Haskell variable name.
chop :: String -> String
chop name = take (length name - length antiSuffix) name
-- | Traverse 'R.SEXP' structure and find all occurences of antiquotations.
collectAntis :: R.SEXP s a -> Set (SEXP s 'R.Char)
collectAntis (hexp -> Symbol (R.unsafeCoerce -> name) _ _)
| isAnti name = Set.singleton name
collectAntis (hexp -> (List sxa sxb sxc)) = do
Set.unions [collectAntis sxa, collectAntis sxb, collectAntis sxc]
collectAntis (hexp -> (Lang (hexp -> Symbol (R.unsafeCoerce -> name) _ _) sxb))
| isAnti name = Set.insert name (collectAntis sxb)
collectAntis (hexp -> (Lang sxa sxb)) =
Set.union (collectAntis sxa) (collectAntis sxb)
collectAntis (hexp -> (Closure sxa sxb sxc)) =
Set.unions [collectAntis sxa, collectAntis sxb, collectAntis sxc]
collectAntis (hexp -> (Vector _ sxv)) =
Set.unions [collectAntis (R.unsafeRelease sx) | SomeSEXP sx <- Vector.toList sxv]
collectAntis (hexp -> (Expr _ sxv)) =
Set.unions [collectAntis (R.unsafeRelease sx) | SomeSEXP sx <- Vector.toList sxv]
collectAntis _ = Set.empty
-- | An R quasiquote is syntactic sugar for a function that we
-- generate, which closes over all antiquotation variables, and applies the
-- function to the Haskell values to which those variables are bound. Example:
--
-- @
-- [r| x_hs + y_hs |] ==> apply (apply [r| function(x_hs, y_hs) x_hs + y_hs |] x) y
-- @
expQQ :: String -> Q TH.Exp
expQQ input = do
_ <- runIO $ takeMVar qqLock
expr <- runIO $ R.protect =<< parse input
let antis = [x | (hexp -> Char (Vector.toString -> x))
<- Set.toList (collectAntis expr)]
args = map (TH.dyn . chop) antis
closure = "function(" ++ intercalate "," antis ++ "){" ++ input ++ "}"
z = [| return (R.release nilValue) |]
vars <- mapM (\_ -> TH.newName "x") antis
-- Abstract over antis using fresh vars, to avoid captures with names bound
-- internally (such as 'f' below).
x <- (\body -> foldl TH.appE body args) $ TH.lamE (map TH.varP vars)
[| -- Memoize the runtime parsing of the generated closure (provided the
-- compiler notices that it can let-float to top-level).
let sx = unsafePerformIO $ do
exprs <- parse closure
SomeSEXP e <- R.readVector exprs 0
clos <- R.eval e (R.release globalEnv)
R.unSomeSEXP clos R.preserveObject
return clos
in io $ case sx of
SomeSEXP f ->
R.lcons f =<<
$(foldr (\x xs -> [| R.withProtected $xs $ \cdr -> do
car <- mkSEXPIO $(TH.varE x)
R.lcons car cdr |]) z vars)
|]
runIO $ R.unprotect 1 -- Ptr expr
runIO $ putMVar qqLock ()
pure x