CMCompare-0.0.1.2: CMCompare.cabal

name:           CMCompare
version:        0.0.1.2
author:         Christian Hoener zu Siederdissen, Ivo L. Hofacker
maintainer:     choener@tbi.univie.ac.at
copyright:      Christian Hoener zu Siederdissen, Ivo L. Hofacker, 2010
homepage:       http://www.tbi.univie.ac.at/software/cmcompare/
category:       Bioinformatics
synopsis:       Infernal covariance model comparison
license:        GPL-3
license-file:   LICENSE
build-type:     Simple
stability:      experimental
cabal-version:  >= 1.4.0
description:
                Compares two Infernal covariance models. Returns the common
                MaxiMin score and the offending RNA sequence. High scores point
                toward low discriminative power of the two models. Based on:
                "Discriminatory Power or RNA Family Models, Hoener zu
                Siederdissen and Hofacker, 2010, accepted for eccb10"

extra-source-files:
  scripts/HighScoreEdges.sh
  scripts/NeighborGraph.sh

executable hsCMCompare
  build-depends:
    base >= 4 && < 5,
    cmdargs == 0.6.4,
    array,

    Biobase >= 0.1.0 && < 0.2.0,
    HsTools >= 0.0.1.1 && < 0.0.2

  main-is:
    CMCompare.hs

  ghc-options:
    -O2