BiobaseTurner-0.1.1.0: BiobaseTurner.cabal

name:           BiobaseTurner
version:        0.1.1.0
author:         Christian Hoener zu Siederdissen
maintainer:     choener@tbi.univie.ac.at
homepage:       http://www.tbi.univie.ac.at/~choener/
copyright:      Christian Hoener zu Siederdissen, 2010,2011
category:       Bioinformatics
synopsis:       Import Turner RNA parameters
license:        GPL-3
license-file:   LICENSE
build-type:     Simple
stability:      experimental
cabal-version:  >= 1.6.0
description:
                A data structure for Mathews / Turner RNA and DNA energy
                parameters. This library currently only provides an importer,
                not export functions. There are two reasons: (i) We currently
                have no use-case where we need more than import facilities (ii)
                The file structure is geared towards humans, not machines. If
                you need to be able to export, send a mail.
                .
                This is the 2011 post-library split version, hence not
                deprecated anymore.
                .
                NOTE This is rather fragile as some files use different index
                enumerations, which we handle rather... simplistically. We
                cannot fix one asymmetry case in dnastack.dh, as we do not
                change sources.

library
  build-depends:
    base >3 && <5,
    bytestring,
    bytestring-lexing,
    containers,
    filepath,
    iteratee,
    split,
    BiobaseXNA,
    PrimitiveArray

  exposed-modules:
    Biobase.Turner
    Biobase.Turner.Import

  ghc-options:
    -O2