karps (empty) → 0.1.9.0
raw patch · 85 files changed
+10153/−0 lines, 85 filesdep +QuickCheckdep +SHAdep +aesonsetup-changed
Dependencies added: QuickCheck, SHA, aeson, aeson-pretty, base, base16-bytestring, binary, bytestring, containers, cryptohash-sha256, deepseq, either, exceptions, formatting, hashable, hspec, karps, lens, monad-logger, mtl, random, raw-strings-qq, scientific, semigroups, text, text-format, transformers, unordered-containers, vector, wreq
Files
- LICENSE +201/−0
- Setup.hs +2/−0
- karps.cabal +176/−0
- src/Spark/Core.hs +12/−0
- src/Spark/Core/Column.hs +44/−0
- src/Spark/Core/ColumnFunctions.hs +22/−0
- src/Spark/Core/Context.hs +49/−0
- src/Spark/Core/Dataset.hs +48/−0
- src/Spark/Core/Functions.hs +57/−0
- src/Spark/Core/Internal/AggregationFunctions.hs +163/−0
- src/Spark/Core/Internal/AlgebraStructures.hs +52/−0
- src/Spark/Core/Internal/Arithmetics.hs +116/−0
- src/Spark/Core/Internal/ArithmeticsImpl.hs +60/−0
- src/Spark/Core/Internal/Caching.hs +302/−0
- src/Spark/Core/Internal/CachingUntyped.hs +61/−0
- src/Spark/Core/Internal/CanRename.hs +84/−0
- src/Spark/Core/Internal/Client.hs +143/−0
- src/Spark/Core/Internal/ColumnFunctions.hs +358/−0
- src/Spark/Core/Internal/ColumnStandard.hs +22/−0
- src/Spark/Core/Internal/ColumnStructures.hs +103/−0
- src/Spark/Core/Internal/ComputeDag.hs +82/−0
- src/Spark/Core/Internal/ContextIOInternal.hs +380/−0
- src/Spark/Core/Internal/ContextInteractive.hs +159/−0
- src/Spark/Core/Internal/ContextInternal.hs +268/−0
- src/Spark/Core/Internal/ContextStructures.hs +81/−0
- src/Spark/Core/Internal/DAGFunctions.hs +410/−0
- src/Spark/Core/Internal/DAGStructures.hs +107/−0
- src/Spark/Core/Internal/DatasetFunctions.hs +582/−0
- src/Spark/Core/Internal/DatasetStructures.hs +191/−0
- src/Spark/Core/Internal/FunctionsInternals.hs +387/−0
- src/Spark/Core/Internal/Groups.hs +348/−0
- src/Spark/Core/Internal/Joins.hs +93/−0
- src/Spark/Core/Internal/LocalDataFunctions.hs +120/−0
- src/Spark/Core/Internal/LocatedBase.hs +51/−0
- src/Spark/Core/Internal/ObservableStandard.hs +13/−0
- src/Spark/Core/Internal/OpFunctions.hs +235/−0
- src/Spark/Core/Internal/OpStructures.hs +296/−0
- src/Spark/Core/Internal/Paths.hs +184/−0
- src/Spark/Core/Internal/PathsUntyped.hs +119/−0
- src/Spark/Core/Internal/Projections.hs +335/−0
- src/Spark/Core/Internal/Pruning.hs +92/−0
- src/Spark/Core/Internal/RowGenerics.hs +106/−0
- src/Spark/Core/Internal/RowGenericsFrom.hs +185/−0
- src/Spark/Core/Internal/RowStructures.hs +50/−0
- src/Spark/Core/Internal/RowUtils.hs +120/−0
- src/Spark/Core/Internal/TypesFunctions.hs +249/−0
- src/Spark/Core/Internal/TypesGenerics.hs +161/−0
- src/Spark/Core/Internal/TypesStructures.hs +221/−0
- src/Spark/Core/Internal/TypesStructuresRepr.hs +26/−0
- src/Spark/Core/Internal/Utilities.hs +125/−0
- src/Spark/Core/Row.hs +14/−0
- src/Spark/Core/StructuresInternal.hs +149/−0
- src/Spark/Core/Try.hs +51/−0
- src/Spark/Core/Types.hs +38/−0
- src/Spark/IO/Inputs.hs +14/−0
- src/Spark/IO/Internal/InputGeneric.hs +172/−0
- src/Spark/IO/Internal/Json.hs +107/−0
- src/Spark/IO/Internal/OutputCommon.hs +107/−0
- test-integration/Spark/Core/CachingSpec.hs +45/−0
- test-integration/Spark/Core/CollectSpec.hs +62/−0
- test-integration/Spark/Core/ColumnSpec.hs +59/−0
- test-integration/Spark/Core/GroupsSpec.hs +35/−0
- test-integration/Spark/Core/IntegrationUtilities.hs +74/−0
- test-integration/Spark/Core/JoinsSpec.hs +33/−0
- test-integration/Spark/Core/PruningSpec.hs +37/−0
- test-integration/Spark/Core/SimpleAddSpec.hs +66/−0
- test-integration/Spark/IO/JsonSpec.hs +41/−0
- test-integration/Spark/IO/StampSpec.hs +28/−0
- test-integration/Spec.hs +2/−0
- test/Spark/Core/ColumnSpec.hs +66/−0
- test/Spark/Core/ContextSpec.hs +17/−0
- test/Spark/Core/DatasetSpec.hs +70/−0
- test/Spark/Core/Internal/CachingSpec.hs +169/−0
- test/Spark/Core/Internal/DAGFunctionsSpec.hs +113/−0
- test/Spark/Core/Internal/GroupsSpec.hs +56/−0
- test/Spark/Core/Internal/LocalDataFunctionsSpec.hs +18/−0
- test/Spark/Core/Internal/OpFunctionsSpec.hs +33/−0
- test/Spark/Core/Internal/PathsSpec.hs +188/−0
- test/Spark/Core/Internal/RowUtilsSpec.hs +40/−0
- test/Spark/Core/PathSpec.hs +42/−0
- test/Spark/Core/ProjectionsSpec.hs +113/−0
- test/Spark/Core/RowToSQLSpec.hs +68/−0
- test/Spark/Core/SimpleExamplesSpec.hs +75/−0
- test/Spark/Core/TypesSpec.hs +98/−0
- test/Spec.hs +2/−0
+ LICENSE view
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+ Setup.hs view
@@ -0,0 +1,2 @@+import Distribution.Simple+main = defaultMain
+ karps.cabal view
@@ -0,0 +1,176 @@+name: karps+version: 0.1.9.0+cabal-version: >=1.10+build-type: Simple+license: Apache-2.0+license-file: LICENSE+copyright: 2016 Karps-Haskell contributors+maintainer: krapsh@yandex.com+homepage: https://github.com/krapsh/kraps-haskell+synopsis: Haskell bindings for Spark Dataframes and Datasets+description:+ Karps-Haskell is an exploration vehicle for developing safe,+ scalable and reliable data pipelines over Apache Spark, using+ the DataFrame API.+ In order to use it, you must launch Spark with the+ karps-server module installed.+category: Web, Big data+author: krapsh++source-repository head+ type: git+ location: https://github.com/krapsh/kraps-haskell++library+ exposed-modules:+ Spark.Core+ Spark.Core.Context+ Spark.Core.Column+ Spark.Core.ColumnFunctions+ Spark.Core.Dataset+ Spark.Core.Functions+ Spark.Core.Internal.Arithmetics+ Spark.Core.Internal.ArithmeticsImpl+ Spark.Core.Internal.Caching+ Spark.Core.Internal.CanRename+ Spark.Core.Internal.Client+ Spark.Core.Internal.ColumnStandard+ Spark.Core.Internal.ComputeDag+ Spark.Core.Internal.ContextInteractive+ Spark.Core.Internal.ContextInternal+ Spark.Core.Internal.ContextIOInternal+ Spark.Core.Internal.ContextStructures+ Spark.Core.Internal.DAGFunctions+ Spark.Core.Internal.DAGStructures+ Spark.Core.Internal.DatasetFunctions+ Spark.Core.Internal.DatasetStructures+ Spark.Core.Internal.Groups+ Spark.Core.Internal.Joins+ Spark.Core.Internal.LocalDataFunctions+ Spark.Core.Internal.ObservableStandard+ Spark.Core.Internal.OpFunctions+ Spark.Core.Internal.OpStructures+ Spark.Core.Internal.Paths+ Spark.Core.Internal.PathsUntyped+ Spark.Core.Internal.Projections+ Spark.Core.Internal.Pruning+ Spark.Core.Internal.RowGenericsFrom+ Spark.Core.Internal.Utilities+ Spark.Core.Internal.TypesGenerics+ Spark.Core.Internal.TypesStructures+ Spark.Core.Internal.TypesStructuresRepr+ Spark.Core.Internal.TypesFunctions+ Spark.Core.Row+ Spark.Core.StructuresInternal+ Spark.Core.Try+ Spark.Core.Types+ Spark.IO.Inputs+ build-depends:+ aeson >=0.11.2.1 && <0.12,+ aeson-pretty >=0.8.2 && <0.9,+ base >=4.8.1 && <5,+ base16-bytestring >=0.1.1.6 && <0.2,+ binary >=0.7 && <0.9,+ bytestring >=0.10.8.1 && <0.11,+ containers >=0.5.7.1 && <0.6,+ cryptohash-sha256 >=0.11.100.1 && <0.12,+ deepseq >=1.4.2.0 && <1.5,+ either >=4.4.1.1 && <4.5,+ exceptions >=0.8.3 && <0.9,+ formatting >=6.2.4 && <6.3,+ hashable >=1.2.4.0 && <1.3,+ lens ==4.14.*,+ monad-logger >=0.3.20.1 && <0.4,+ QuickCheck >=2.8.2 && <2.9,+ random ==1.1.*,+ scientific >=0.3.4.9 && <0.4,+ semigroups >=0.18.2 && <0.19,+ SHA >=1.6.4.2 && <1.7,+ mtl >=2.2.1 && <2.3,+ text >=1.2.2.1 && <1.3,+ text-format >=0.3.1.1 && <0.4,+ transformers >=0.5.2.0 && <0.6,+ unordered-containers >=0.2.7.1 && <0.3,+ vector >=0.11.0.0 && <0.12,+ wreq >=0.4.1.0 && <0.5+ default-language: Haskell2010+ hs-source-dirs: src+ other-modules:+ Spark.Core.Internal.CachingUntyped+ Spark.Core.Internal.ColumnFunctions+ Spark.Core.Internal.AlgebraStructures+ Spark.Core.Internal.ColumnStructures+ Spark.Core.Internal.AggregationFunctions+ Spark.Core.Internal.FunctionsInternals+ Spark.Core.Internal.LocatedBase+ Spark.Core.Internal.RowGenerics+ Spark.Core.Internal.RowStructures+ Spark.Core.Internal.RowUtils+ Spark.IO.Internal.InputGeneric+ Spark.IO.Internal.Json+ Spark.IO.Internal.OutputCommon+ ghc-options: -Wall ---fhpc -O0++test-suite karps-test+ type: exitcode-stdio-1.0+ main-is: Spec.hs+ build-depends:+ aeson >=0.11.2.1 && <0.12,+ base >=4.9.0.0 && <4.10,+ bytestring >=0.10.8.1 && <0.11,+ containers >=0.5.7.1 && <0.6,+ formatting >=6.2.4 && <6.3,+ karps >=0.1.9.0 && <0.2,+ hspec >=2.0 && <2.3,+ text >=1.2.2.1 && <1.3,+ raw-strings-qq ==1.1.*,+ QuickCheck >=2.8.2 && <2.9,+ vector >=0.11.0.0 && <0.12+ default-language: Haskell2010+ hs-source-dirs: test+ other-modules:+ Spark.Core.ContextSpec+ Spark.Core.DatasetSpec+ Spark.Core.Internal.CachingSpec+ Spark.Core.Internal.LocalDataFunctionsSpec+ Spark.Core.Internal.OpFunctionsSpec+ Spark.Core.Internal.RowUtilsSpec+ Spark.Core.Internal.DAGFunctionsSpec+ Spark.Core.Internal.PathsSpec+ Spark.Core.Internal.GroupsSpec+ Spark.Core.PathSpec+ Spark.Core.ProjectionsSpec+ Spark.Core.RowToSQLSpec+ Spark.Core.TypesSpec+ Spark.Core.ColumnSpec+ Spark.Core.SimpleExamplesSpec+ ghc-options: -- -fhpc -O0 -Wall -prof+test-suite karps-test-integration+ type: exitcode-stdio-1.0+ main-is: Spec.hs+ build-depends:+ aeson >=0.11.2.1 && <0.12,+ base >=4.9.0.0 && <4.10,+ bytestring >=0.10.8.1 && <0.11,+ containers >=0.5.7.1 && <0.6,+ formatting >=6.2.4 && <6.3,+ karps >=0.1.9.0 && <0.2,+ hspec ==2.*,+ text >=1.2.2.1 && <1.3,+ raw-strings-qq ==1.1.*,+ QuickCheck >=2.8.2 && <2.9,+ vector >=0.11.0.0 && <0.12+ default-language: Haskell2010+ hs-source-dirs: test-integration+ other-modules:+ Spark.Core.CachingSpec+ Spark.Core.CollectSpec+ Spark.Core.ColumnSpec+ Spark.Core.GroupsSpec+ Spark.Core.IntegrationUtilities+ Spark.Core.JoinsSpec+ Spark.Core.SimpleAddSpec+ Spark.Core.PruningSpec+ Spark.IO.JsonSpec+ Spark.IO.StampSpec+ ghc-options: -- -fhpc -O0 -Wall -rtsopts=all -auto-all
+ src/Spark/Core.hs view
@@ -0,0 +1,12 @@+{-|+Module : Spark.Core+Description : Core functions and data structures to communicate with the Karps+ server.+Copyright : (c) Karps contributors, 2016+License : Apache-2.0+Maintainer : krapsh@yandex.com+Stability : experimental+Portability : POSIX++-}+module Spark.Core where
+ src/Spark/Core/Column.hs view
@@ -0,0 +1,44 @@+{-# LANGUAGE FlexibleContexts #-}++{- |+Module : Spark.Core.Column+Description : Column types and basic operations.++Operations on columns.+-}+module Spark.Core.Column(+ -- * Types+ Column,+ DynColumn,+ GenericColumn,+ -- * Extractions and collations+ asCol,+ asCol',+ pack1,+ pack,+ pack',+ struct,+ struct',+ castCol,+ castCol',+ colRef,+ (//),+ (/-),+ -- ToStaticProjectable,+ StaticColProjection,+ DynamicColProjection,+ unsafeStaticProjection,+ -- * Column type manipulations+ dropColType,+ -- * Column functions+ colType,+ untypedCol,+ colFromObs,+ colFromObs',+ applyCol1,+ ) where++import Spark.Core.Internal.ColumnStructures+import Spark.Core.Internal.ColumnFunctions+import Spark.Core.Internal.FunctionsInternals+import Spark.Core.Internal.Projections
+ src/Spark/Core/ColumnFunctions.hs view
@@ -0,0 +1,22 @@++{-|+Module : Spark.Core.ColumnFunctions+Description : Column operations++The standard library of functions that operate on+data columns.+-}+module Spark.Core.ColumnFunctions(+ -- * Reductions+ sumCol,+ sumCol',+ countCol,+ countCol',+ -- * Casting+ asDoubleCol+) where++import Spark.Core.Internal.ArithmeticsImpl()+import Spark.Core.Internal.ColumnStandard+import Spark.Core.Internal.AggregationFunctions+import Spark.Core.Internal.Projections()
+ src/Spark/Core/Context.hs view
@@ -0,0 +1,49 @@+{-# LANGUAGE OverloadedStrings #-}+{-# LANGUAGE ScopedTypeVariables #-}++{- | This module defines session objects that act as entry points to spark.++There are two ways to interact with Spark: using an explicit state object,+or using the default state object (interactive session).++While the interactive session is the most convenient, it should not be+used for more than quick experimentations. Any complex code should use+the SparkSession and SparkState objects.+-}+module Spark.Core.Context(+ SparkSessionConf(..),+ SparkSession,+ SparkState,+ SparkInteractiveException,+ FromSQL,+ defaultConf,+ executeCommand1,+ executeCommand1',+ computationStats,+ createSparkSessionDef,+ closeSparkSessionDef,+ currentSessionDef,+ computationStatsDef,+ exec1Def,+ exec1Def',+ execStateDef+ ) where++import Data.Text(pack)++import Spark.Core.Internal.ContextStructures+import Spark.Core.Internal.ContextIOInternal+import Spark.Core.Internal.ContextInteractive+import Spark.Core.Internal.RowGenericsFrom(FromSQL)+++-- | The default configuration if the Karps server is being run locally.+defaultConf :: SparkSessionConf+defaultConf =+ SparkSessionConf {+ confEndPoint = pack "http://127.0.0.1",+ confPort = 8081,+ confPollingIntervalMillis = 500,+ confRequestedSessionName = "",+ confUseNodePrunning = False -- Disable graph pruning by default+ }
+ src/Spark/Core/Dataset.hs view
@@ -0,0 +1,48 @@++{- |+Module : Spark.Core.Dataset+Description : Dataset types and basic operations.++This module describes the core data types (Dataset, DataFrame,+Observable and DynObservable), and some basic operations to relate them.+-}+module Spark.Core.Dataset(+ -- * Common data structures+ -- TODO Should it be hidden?+ ComputeNode,+ LocLocal,+ LocDistributed,+ LocUnknown,+ UntypedNode,+ -- * Distributed data structures+ Dataset,+ DataFrame,+ -- * Local data structures+ LocalData,+ LocalFrame,+ -- * Conversions+ asDF,+ asDS,+ asLocalObservable,+ castType,+ castType',+ -- * Relations+ parents,+ untyped,+ untyped',+ depends,+ logicalParents,+ logicalParents',+ -- * Attributes+ nodeLogicalParents,+ nodeLogicalDependencies,+ nodeParents,+ nodeOp,+ nodeId,+ nodeName,+ nodeType,+ ) where++import Spark.Core.Internal.DatasetStructures+import Spark.Core.Internal.DatasetFunctions+import Spark.Core.Internal.Projections()
+ src/Spark/Core/Functions.hs view
@@ -0,0 +1,57 @@+{-# LANGUAGE OverloadedStrings #-}+{-# LANGUAGE FlexibleContexts #-}++module Spark.Core.Functions(+ -- * Creation+ dataset,+ dataframe,+ constant,+ -- * Standard conversions+ asLocalObservable,+ asDouble,+ -- * Arithmetic operations+ (.+),+ (.-),+ (./),+ div',+ -- * Utilities+ (@@),+ _1,+ _2,+ -- * Standard library+ collect,+ collect',+ count,+ identity,+ autocache,+ cache,+ uncache,+ joinInner,+ joinInner',+ broadcastPair+ ) where+++import Data.Aeson(toJSON)+import qualified Data.Vector as V++import Spark.Core.Dataset+import Spark.Core.Types+import Spark.Core.Row+import Spark.Core.Internal.ArithmeticsImpl+import Spark.Core.Internal.DatasetFunctions+import Spark.Core.Internal.Joins+import Spark.Core.Internal.Utilities+import Spark.Core.Internal.LocalDataFunctions+import Spark.Core.Internal.ObservableStandard+import Spark.Core.Internal.FunctionsInternals()+import Spark.Core.Internal.OpStructures+import Spark.Core.Internal.AggregationFunctions+import Spark.Core.Internal.TypesStructures(SQLType(..))+import Spark.Core.Internal.Projections+import Spark.Core.Internal.CanRename++dataset :: (ToSQL a, SQLTypeable a, HasCallStack) => [a] -> Dataset a+dataset l = emptyDataset op tp where+ tp = buildType+ op = NodeDistributedLit (unSQLType tp) (V.fromList ((toJSON . valueToCell) <$> l))
+ src/Spark/Core/Internal/AggregationFunctions.hs view
@@ -0,0 +1,163 @@+{-# LANGUAGE ScopedTypeVariables #-}+{-# LANGUAGE OverloadedStrings #-}+{-# LANGUAGE RankNTypes #-}+{-# LANGUAGE FlexibleContexts #-}++-- A number of standard aggregation functions.++module Spark.Core.Internal.AggregationFunctions(+ -- Standard library+ collect,+ collect',+ count,+ count',+ countCol,+ countCol',+ sumCol,+ sumCol',+ -- Developer functions+ AggTry,+ UniversalAggregator(..),+ applyUAOUnsafe,+ applyUntypedUniAgg3+) where++import Data.Aeson(Value(Null))+import qualified Data.Text as T+import qualified Data.Vector as V++import Spark.Core.Internal.DatasetStructures+import Spark.Core.Internal.ColumnStructures+import Spark.Core.Internal.ColumnFunctions(colType, untypedCol)+import Spark.Core.Internal.DatasetFunctions+import Spark.Core.Internal.RowGenerics(ToSQL)+import Spark.Core.Internal.LocalDataFunctions()+import Spark.Core.Internal.FunctionsInternals+import Spark.Core.Internal.OpStructures+import Spark.Core.Internal.TypesStructures+import Spark.Core.Internal.Utilities+import Spark.Core.Internal.TypesFunctions(arrayType')+import Spark.Core.StructuresInternal(emptyFieldPath)+import Spark.Core.Types+import Spark.Core.Try++{-| The sum of all the elements in a column.++If the data type is too small to represent the sum, the value being returned is+undefined.+-}+sumCol :: forall ref a. (Num a, SQLTypeable a, ToSQL a) =>+ Column ref a -> LocalData a+sumCol = applyUAOUnsafe _sumAgg'++sumCol' :: DynColumn -> LocalFrame+sumCol' = applyUntypedUniAgg3 _sumAgg'++{-| The number of elements in a column.++-}+-- TODO use Long for the return data type.+count :: forall a. Dataset a -> LocalData Int+count = countCol . asCol++count' :: DataFrame -> LocalFrame+count' = countCol' . asCol'++countCol :: Column ref a -> LocalData Int+countCol = applyUAOUnsafe _countAgg'++countCol' :: DynColumn -> LocalFrame+countCol' = applyUntypedUniAgg3 _countAgg'+++{-| Collects all the elements of a column into a list.++NOTE:+This list is sorted in the canonical ordering of the data type: however the+data may be stored by Spark, the result will always be in the same order.+This is a departure from Spark, which does not guarantee an ordering on+the returned data.+-}+collect :: forall ref a. (SQLTypeable a) => Column ref a -> LocalData [a]+collect = applyUAOUnsafe _collectAgg'++{-| See the documentation of collect. -}+collect' :: DynColumn -> LocalFrame+collect' = applyUntypedUniAgg3 _collectAgg'++type AggTry a = Either T.Text a++{-|+This is the universal aggregator: the invariant aggregator and+some extra laws to combine multiple outputs.+It is useful for combining the results over multiple passes.+A real implementation in Spark has also an inner pass.+-}+data UniversalAggregator a buff = UniversalAggregator {+ uaMergeType :: SQLType buff,+ -- The result is partioning invariant+ uaInitialOuter :: Dataset a -> LocalData buff,+ -- This operation is associative and commutative+ -- The logical parents of the final observable have to be the 2 inputs+ uaMergeBuffer :: LocalData buff -> LocalData buff -> LocalData buff+}++-- TODO(kps) check the coming type for non-summable types+_sumAgg' :: DataType -> AggTry UniversalAggregatorOp+_sumAgg' dt = pure UniversalAggregatorOp {+ uaoMergeType = dt,+ uaoInitialOuter = InnerAggOp $ AggFunction "SUM" (V.singleton emptyFieldPath),+ uaoMergeBuffer = ColumnSemiGroupLaw "SUM_SL"+ }++_countAgg' :: DataType -> AggTry UniversalAggregatorOp+-- Counting will always succeed.+_countAgg' _ = pure UniversalAggregatorOp {+ -- TODO(kps) switch to BigInt+ uaoMergeType = StrictType IntType,+ uaoInitialOuter = InnerAggOp $ AggFunction "COUNT" (V.singleton emptyFieldPath),+ uaoMergeBuffer = ColumnSemiGroupLaw "SUM"+ }++_collectAgg' :: DataType -> AggTry UniversalAggregatorOp+-- Counting will always succeed.+_collectAgg' dt =+ let ldt = arrayType' dt+ soMerge = StandardOperator {+ soName = "org.spark.Collect",+ soOutputType = ldt,+ soExtra = Null+ }+ soMono = StandardOperator {+ soName = "org.spark.CatSorted",+ soOutputType = ldt,+ soExtra = Null+ }+ in pure UniversalAggregatorOp {+ -- TODO(kps) switch to BigInt+ uaoMergeType = ldt,+ uaoInitialOuter = OpaqueAggTransform soMerge,+ uaoMergeBuffer = OpaqueSemiGroupLaw soMono+ }++applyUntypedUniAgg3 :: (DataType -> AggTry UniversalAggregatorOp) -> DynColumn -> LocalFrame+applyUntypedUniAgg3 f dc = do+ c <- dc+ let uaot = f . unSQLType . colType $ c+ uao <- tryEither uaot+ let no = NodeAggregatorReduction uao+ let ds = pack1 c+ return $ emptyLocalData no (SQLType (uaoMergeType uao)) `parents` [untyped ds]++applyUAOUnsafe :: forall a b ref. (SQLTypeable b, HasCallStack) => (DataType -> AggTry UniversalAggregatorOp) -> Column ref a -> LocalData b+applyUAOUnsafe f c =+ let lf = applyUntypedUniAgg3 f (untypedCol c)+ in forceRight (asObservable lf)++-- _guardType :: DataType -> (UntypedDataset -> UntypedLocalData) -> (UntypedDataset -> LocalFrame)+-- _guardType dt f ds =+-- if unSQLType (nodeType ds) == dt+-- then+-- pure $ f ds+-- else+-- tryError $ sformat ("Expected type "%sh%" but got type "%sh) dt (nodeType ds)
+ src/Spark/Core/Internal/AlgebraStructures.hs view
@@ -0,0 +1,52 @@+{-# LANGUAGE RankNTypes #-}+{-# LANGUAGE FunctionalDependencies #-}+{-# LANGUAGE ScopedTypeVariables #-}+{-# LANGUAGE MultiParamTypeClasses #-}+{-# LANGUAGE FlexibleInstances #-}+{-# LANGUAGE TypeFamilies #-}+{-# LANGUAGE OverloadedStrings #-}+{-# LANGUAGE FlexibleContexts #-}+{-# LANGUAGE FunctionalDependencies #-}+{-# LANGUAGE RankNTypes #-}++-- TODO remove this file+module Spark.Core.Internal.AlgebraStructures where++-- | Algebraic structures that are common to columns and observables.+++data BinaryOpFun in1 in2 to = BinaryOpFun {+ bodLift1 :: in1 -> to,+ bodLift2 :: in2 -> to,+ bodOp :: to -> to -> to+}+++class HomoBinaryOp2 in1 in2 to | in1 in2 -> to where+ _liftFun :: (to -> to -> to) -> BinaryOpFun in1 in2 to++_applyBinOp0 :: forall in1 in2 to. in1 -> in2 -> BinaryOpFun in1 in2 to -> to+_applyBinOp0 i1 i2 (BinaryOpFun l1 l2 bo) = bo (l1 i1) (l2 i2)++applyBinOp :: forall in1 in2 to. (HomoBinaryOp2 in1 in2 to) => (to -> to -> to) -> in1 -> in2 -> to+applyBinOp f i1 i2 =+ _applyBinOp0 i1 i2 (_liftFun f)++-- -- | Overloaded operator for operationts that are guaranteed to succeed.+-- (.+) :: (Num out, HomoBinaryOp2 a1 a2 out) => a1 -> a2 -> out+-- (.+) = applyBinOp (+)++(.-) :: (Num out, HomoBinaryOp2 a1 a2 out) => a1 -> a2 -> out+(.-) = applyBinOp (-)++(.*) :: (Num out, HomoBinaryOp2 a1 a2 out) => a1 -> a2 -> out+(.*) = applyBinOp (*)++-- TODO(kps) add here the rest of the Integral operations+div' :: (Integral out, HomoBinaryOp2 a1 a2 out) => a1 -> a2 -> out+div' = applyBinOp div++-- **** Fractional ****++(./) :: (Fractional out, HomoBinaryOp2 a1 a2 out) => a1 -> a2 -> out+(./) = applyBinOp (/)
+ src/Spark/Core/Internal/Arithmetics.hs view
@@ -0,0 +1,116 @@+{-# LANGUAGE MultiParamTypeClasses #-}+{-# LANGUAGE FlexibleInstances #-}+{-# LANGUAGE TypeFamilies #-}+-- Required by old versions+{-# LANGUAGE FlexibleContexts #-}++module Spark.Core.Internal.Arithmetics(+ GeneralizedHomoReturn,+ GeneralizedHomo2,+ HomoColOp2,+ -- | Developer API+ performOp,+ ) where+++import Spark.Core.Internal.ColumnFunctions+import Spark.Core.Internal.ColumnStructures+import Spark.Core.Internal.DatasetStructures+import Spark.Core.Internal.FunctionsInternals(projectColFunction2')+import Spark.Core.Internal.Utilities++{-| All the automatic conversions supported when lifting a -}+type family GeneralizedHomoReturn x1 x2 where+ GeneralizedHomoReturn (Column ref x1) (Column ref x1) = Column ref x1+ GeneralizedHomoReturn (Column ref x1) DynColumn = DynColumn+ GeneralizedHomoReturn (Column ref x1) (LocalData x1) = Column ref x1+ GeneralizedHomoReturn (Column ref x1) LocalFrame = DynColumn+ GeneralizedHomoReturn DynColumn (Column ref x1) = DynColumn+ GeneralizedHomoReturn DynColumn DynColumn = DynColumn+ GeneralizedHomoReturn DynColumn (LocalData x1) = DynColumn+ GeneralizedHomoReturn DynColumn LocalFrame = DynColumn+ GeneralizedHomoReturn (LocalData x1) (Column ref x1) = Column ref x1+ GeneralizedHomoReturn (LocalData x1) DynColumn = DynColumn+ GeneralizedHomoReturn (LocalData x1) (LocalData x1) = LocalData x1+ GeneralizedHomoReturn (LocalData x1) LocalFrame = LocalFrame+ GeneralizedHomoReturn LocalFrame (Column ref x1) = DynColumn+ GeneralizedHomoReturn LocalFrame LocalFrame = LocalFrame++-- The type of an homogeneous operation.+-- TODO it would be nice to enforce this contstraint at the type level,+-- but it is a bit more complex to do.+type HomoColOp2 = UntypedColumnData -> UntypedColumnData -> UntypedColumnData++{-| The class of types that can be lifted to operations onto Karps types.++This is the class for operations on homogeneous types (the inputs and the+output have the same underlying type).++At its core, it takes a broadcasted operation that works on columns, and+makes that operation available on other shapes.+-}+class GeneralizedHomo2 x1 x2 where+ _projectHomo :: x1 -> x2 -> HomoColOp2 -> GeneralizedHomoReturn x1 x2++{-| Performs an operation, using a reference operation defined on columns.+-}+performOp :: (GeneralizedHomo2 x1 x2) =>+ HomoColOp2 ->+ x1 ->+ x2 ->+ GeneralizedHomoReturn x1 x2+performOp f x1 x2 = _projectHomo x1 x2 f++-- ******* INSTANCES *********++instance GeneralizedHomo2 DynColumn DynColumn where+ _projectHomo = _performDynDyn++instance GeneralizedHomo2 (Column ref x) (Column ref x) where+ _projectHomo = _performCC++instance GeneralizedHomo2 DynColumn (Column ref x) where+ _projectHomo dc1 c2 = _performDynDyn dc1 (untypedCol c2)++instance GeneralizedHomo2 (Column ref x) DynColumn where+ _projectHomo c1 = _performDynDyn (untypedCol c1)++instance GeneralizedHomo2 (Column ref x) (LocalData x) where+ _projectHomo c1 o2 = _projectHomo c1 (broadcast o2 c1)++instance GeneralizedHomo2 (LocalData x) (Column ref x) where+ _projectHomo o1 c2 = _projectHomo (broadcast o1 c2) c2++instance GeneralizedHomo2 (Column ref x) LocalFrame where+ _projectHomo c1 o2' = _projectHomo c1 (broadcast' o2' (untypedCol c1))++instance GeneralizedHomo2 LocalFrame (Column ref x) where+ _projectHomo o1' c2 = _projectHomo (broadcast' o1' (untypedCol c2)) c2++instance GeneralizedHomo2 LocalFrame LocalFrame where+ _projectHomo o1' o2' f =+ let f' x y = f <$> x <*> y+ in projectColFunction2' f' o1' o2'+++_performDynDyn ::+ DynColumn -> DynColumn -> HomoColOp2 -> DynColumn+_performDynDyn dc1 dc2 f = do+ c1 <- dc1+ c2 <- dc2+ -- TODO: add type guard+ let c = f c1 c2+ -- TODO: add dynamic check on the type of the return+ return (dropColType c)++_performCC :: (HasCallStack) =>+ Column ref x -> Column ref x -> HomoColOp2 -> Column ref x+_performCC c1 c2 f =+ let sqlt = colType c1+ c = f (iUntypedColData c1) (iUntypedColData c2)+ c' = forceRight $ castCol (colRef c1) sqlt (pure c)+ in c'++_performCO :: (HasCallStack) =>+ Column ref x -> LocalData x -> HomoColOp2 -> Column ref x+_performCO c1 o2 = _performCC c1 (broadcast o2 c1)
+ src/Spark/Core/Internal/ArithmeticsImpl.hs view
@@ -0,0 +1,60 @@+{-# OPTIONS_GHC -fno-warn-orphans #-}+-- Disabled for old versions+-- {-# OPTIONS_GHC -fno-warn-redundant-constraints #-}+{-# LANGUAGE RankNTypes #-}+{-# LANGUAGE FlexibleInstances #-}+{-# LANGUAGE OverloadedStrings #-}+-- Required by old versions+{-# LANGUAGE FlexibleContexts #-}++{-| This module contains all the class instances and operators related+to arithmetics with Datasets, Dataframes, Columns and Observables.+-}+module Spark.Core.Internal.ArithmeticsImpl(+ (.+),+ (.-),+ (./),+ div'+ ) where++import Spark.Core.Internal.ColumnFunctions+import Spark.Core.Internal.DatasetFunctions+import Spark.Core.Internal.DatasetStructures+import Spark.Core.Internal.LocalDataFunctions(constant)+import Spark.Core.Internal.FunctionsInternals(projectColFunction2', projectColFunction')+import Spark.Core.Internal.Arithmetics+++{-| A generalization of the addition for the Karps types.+-}+(.+) :: forall a1 a2. (Num a1, Num a2, GeneralizedHomo2 a1 a2) =>+ a1 -> a2 -> GeneralizedHomoReturn a1 a2+(.+) = performOp (homoColOp2 "+")++{-| A generalization of the negation for the Karps types.+-}+(.-) :: forall a1 a2. (Num a1, Num a2, GeneralizedHomo2 a1 a2) =>+ a1 -> a2 -> GeneralizedHomoReturn a1 a2+(.-) = performOp (homoColOp2 "-")++(./) :: (Fractional a1, Fractional a2, GeneralizedHomo2 a1 a2) =>+ a1 -> a2 -> GeneralizedHomoReturn a1 a2+(./) = performOp (homoColOp2 "/")++div' :: forall a1 a2. (Num a1, Num a2, GeneralizedHomo2 a1 a2) =>+ a1 -> a2 -> GeneralizedHomoReturn a1 a2+div' = performOp (homoColOp2 "/")++-- All the operations are defined from column operations+-- This adds a little overhead, but it can be optimized by the backend.+instance Num LocalFrame where+ (+) = projectColFunction2' (+)+ (-) = projectColFunction2' (-)+ (*) = projectColFunction2' (*)+ abs = projectColFunction' abs+ signum = projectColFunction' signum+ -- It will choose by default to use the Int type, which may not be+ -- what the user wants.+ -- In case there is some doubt, user should use typed operations.+ fromInteger x = asLocalObservable $ constant (fromInteger x :: Int)+ negate = projectColFunction' negate
+ src/Spark/Core/Internal/Caching.hs view
@@ -0,0 +1,302 @@+{-# LANGUAGE ScopedTypeVariables #-}+{-# LANGUAGE FlexibleContexts #-}+{-# LANGUAGE OverloadedStrings #-}++{- Methods related to checking caching in the graph.+-}++module Spark.Core.Internal.Caching(+ NodeCachingType(..),+ CachingFailure(..),+ CacheTry,+ CacheGraph,+ AutocacheGen(..),+ checkCaching,+ fillAutoCache+) where++import Control.Monad.Identity+import qualified Data.Set as S+import qualified Data.Map.Strict as M+import qualified Data.Vector as V+import Control.Arrow((&&&))+import Data.Foldable+import Data.Set(Set)+import Data.Maybe(mapMaybe)+import Debug.Trace(trace)+import Data.Text(Text)+import Formatting+-- import Debug.Trace++import Spark.Core.Internal.DAGFunctions+import Spark.Core.Internal.DAGStructures+import Spark.Core.Internal.DatasetStructures+import Spark.Core.Internal.Utilities+-- import Spark.Core.StructuresInternal(NodeId)++data NodeCachingType =+ -- Hinted caching. Will be fullfilled by the algorithm below.+ -- The node id is that of the node being cached+ AutocacheOp VertexId+ -- Unconditional caching+ -- The node id is that of the node being cached+ | CacheOp VertexId+ -- First one is the node id+ -- the second is the id of the matching cache or autocache node+ | UncacheOp VertexId VertexId+ | Through+ | Stop deriving (Show, Eq)++data CachingFailure = CachingFailure {+ cachingNode :: !VertexId,+ uncachingNode :: !VertexId,+ escapingNode :: !VertexId+} deriving (Show, Eq)++type CacheTry t = Either Text t++type CacheGraph v = Graph (v, NodeCachingType) StructureEdge++data AutocacheGen v = AutocacheGen {+ -- Generates an uncaching node to insert at the final location of uncaching+ deriveUncache :: Vertex v -> Vertex v,+ -- A function that given a node, generates an identity node (and a new node+ -- id) that can be inserted in place. The generated node id will be used with+ -- the identity node newly generated; the previous node will be moved around+ -- along with its identity.+ deriveIdentity :: Vertex v -> Vertex v+}++checkCaching :: (Show v) =>+ Graph v StructureEdge ->+ (v -> CacheTry NodeCachingType) ->+ CacheTry [CachingFailure]+checkCaching g fun = _cacheGraph g fun >>= _checkCaching++fillAutoCache :: (Show v) =>+ (v -> CacheTry NodeCachingType) ->+ AutocacheGen v ->+ Graph v StructureEdge ->+ -- The final graph being constructed.+ DagTry (Graph v StructureEdge)+fillAutoCache cacheFun acGen g = do+ cg <- graphMapVertices g $ \vx _ -> (const vx &&& id) <$> cacheFun vx+ acg <- _fillAutoCache acGen cg+ let acg' = graphMapVertices' fst acg+ return acg'+++-- Some internal types to guarantee more correctness+newtype AutocacheVertex v = AutocacheVertex (Vertex v)+newtype StopVertex v = StopVertex { unStopVertex :: Vertex v }+newtype IdentityVertex v = IdentityVertex (Vertex v)+data UncacheVertex v = UncacheVertex (Vertex v) VertexId deriving (Show)+newtype AnyCacheOp = AnyCacheOp { unAnyCacheOp :: VertexId } deriving (Show, Ord, Eq)++-- The result of creating a vertex+type CreateUncache v =+ Either (UncacheVertex v) (UncacheVertex v, Edge StructureEdge)++-- This performs a graph transform:+-- For each autocache node, it finds the transitive closure of Stop nodes.+-- Then it replaces the sink nodes by a layer of identity nodes and sink nodes+-- and intercalates the uncache node between the two layers, through some+-- logical dependencies.+--+-- If it does not find the closuure, it leaves these+-- autocache nodes alone and does not attempt to remove them: they will be+-- considered as being unconditional caching without checks.+--+-- Note that it works on the reverse of the graph (flow instead of dependencies)+_fillAutoCache :: forall v. (Show v) =>+ AutocacheGen v ->+ -- The graph, already annotated with caching information+ Graph (v, NodeCachingType) StructureEdge ->+ -- The final graph being constructed.+ DagTry (Graph (v, NodeCachingType) StructureEdge)+_fillAutoCache acGen cg =+ -- Find the auto nodes.+ -- Compute the closure for each of them+ -- Perform the insertion.+ -- TODO: this function is too big, split or build subfunctions.+ let+ vxMap = M.fromList ((vertexId &&& id) <$> toList (gVertices cg))+ -- TODO: mark if the result was already in the graph+ findOrCreateIdentity :: StopVertex v -> IdentityVertex v+ findOrCreateIdentity (StopVertex vx) =+ let uvx = deriveIdentity acGen vx+ in case M.lookup (vertexId uvx) vxMap of+ Just vx' -> IdentityVertex $ fst <$> vx' -- Already created+ Nothing -> IdentityVertex uvx+ acNodesAndScopes = _autoCachingCandidates cg+ -- Add the uncaching nodes+ findOrCreateUncache' (acv, l) = case _findOrCreateUncache vxMap acGen acv of+ Left x -> trace ("findOrCreateUncache: dropping autocache node " ++ show x) Nothing+ Right (ucv, ed) -> Just (ed, (acv, ucv, l))+ acWithUncache' = mapMaybe findOrCreateUncache' acNodesAndScopes+ acWithUncache = snd <$> acWithUncache'+ acEdges = fst <$> acWithUncache'+ -- Now group by stop vertex, so that each stop vertex has a list of+ -- associated cache and uncache nodes.+ -- Not sure if they may be several, but it just sounds like good practice.+ tups = myGroupBy [(vertexId (unStopVertex svx), (cvx, uvx, svx)) | (cvx, uvx, l) <- acWithUncache,+ svx <- l]+ -- Just in this case, it should work because of the construction above+ -- TODO: put a lot more documentation here, it is tricky code+ group ((_, uvx, svx) : t) = (svx, findOrCreateIdentity svx, uvx : [uvx' | ( _, uvx', _) <- t])+ group [] = failure "_fillAutoCache:group: empty: should not happen"+ stopsWithCachingSteps :: [(StopVertex v, IdentityVertex v, [UncacheVertex v])]+ stopsWithCachingSteps = (group . snd) <$> M.toList tups+ tups2 = [(svx, ivx, uvx) | (svx, ivx, l) <- stopsWithCachingSteps, uvx <- l]+ folder eds (svx, ivx, uvx) = _performEdgeTransform svx ivx uvx eds+ startEdges = veEdge <$> [ve | (_, v) <- M.toList (gEdges cg), ve <- V.toList v]+ edges = acEdges ++ foldl' folder startEdges tups2+ -- Gather all the vertices and edges, and remove duplicates+ startVertices = V.toList (gVertices cg)+ ucVertices = acWithUncache <&> \(_, UncacheVertex vx cacheVid, _) ->+ -- TODO: propagate the cache vertexId with UncacheVertex+ let op = UncacheOp (vertexId vx) cacheVid+ in (id &&& const op) <$> vx+ idVertices = tups2 <&> \(_, IdentityVertex vx, _) ->+ (id &&& const Stop) <$> vx+ allVertices = startVertices ++ ucVertices ++ idVertices+ -- Make a new graph+ in buildGraphFromList allVertices edges++-- TODO: should be a try to perform extra check operations+_findOrCreateUncache :: (HasCallStack, Show v) =>+ M.Map VertexId (Vertex (v, NodeCachingType)) ->+ AutocacheGen v ->+ AutocacheVertex v -> CreateUncache v+_findOrCreateUncache vxMap acGen (AutocacheVertex acv) =+ let uvx = deriveUncache acGen acv+ acVid = vertexId acv+ uVid = vertexId uvx+ look = vertexData <$> M.lookup uVid vxMap+ in case look of+ Just (x, UncacheOp _ _) ->+ -- That vertex already exists, we will not try to create+ -- an uncaching node then+ Left $ UncacheVertex (Vertex uVid x) uVid+ Just _ ->+ -- That vertex already exists, but it is not the proper type.+ -- This is a programming error in AutocacheGen: we abort here.+ failure $ sformat ("_findOrCreateUncache:"%sh%"->"%sh) acv look+ Nothing ->+ -- The uncache node does not exist, we are going to create one.+ let ed' = Edge uVid acVid ParentEdge+ in Right (UncacheVertex uvx uVid, ed')+++-- FIXME: duplicated work on the stop and identity: pass all the uncache vertexes to process them in one go+_performEdgeTransform ::+ StopVertex v -> IdentityVertex v -> UncacheVertex v -> [Edge StructureEdge] -> [Edge StructureEdge]+_performEdgeTransform (StopVertex svx) (IdentityVertex ivx) (UncacheVertex uvx _) eds =+ let stopVid = vertexId svx+ idenVid = vertexId ivx+ ucVid = vertexId uvx+ -- Rewrite the edges incoming to the stop node so that they point to the+ -- id node instead.+ f ed | edgeTo ed == stopVid = ed { edgeTo = idenVid }+ f ed = ed+ joinEd = Edge { edgeFrom = idenVid, edgeTo = stopVid, edgeData = ParentEdge }+ id1Ed = Edge { edgeFrom = idenVid, edgeTo = ucVid, edgeData = LogicalEdge }+ id2Ed = Edge { edgeFrom = ucVid, edgeTo = stopVid, edgeData = LogicalEdge }+ in id1Ed : id2Ed : joinEd : (f <$> eds)++-- The list of nodes that do autocaching, and the fringes for each of these+-- nodes.+-- Returns a list of caching node -> [stop node]+_autoCachingCandidates :: forall v. (Show v) =>+ Graph (v, NodeCachingType) StructureEdge ->+ [(AutocacheVertex v, [StopVertex v])]+_autoCachingCandidates cg =+ let+ cg' = graphMapVertices' snd cg+ exps = gVertices $ _expansions cg'+ extractAutocache vx = case snd (vertexData vx) of+ AutocacheOp _ -> [AutocacheVertex (fst <$> vx)]+ _ -> []+ acVxs = concatMap extractAutocache (gVertices cg)+ -- All the stop nodes for each caching vertex id+ extractFringe vx = case vertexData vx of+ (Stop, set) -> (id &&& const (vertexId vx)) <$> toList set+ _ -> []+ -- cache vid -> Stop vertex id+ acWithFringe = myGroupBy $ concatMap extractFringe (toList exps)+ vmap = vertexMap cg+ vmap' = vertexMap cg'+ -- TODO: should be a try and it should not fail+ findStop :: VertexId -> Maybe (StopVertex v)+ findStop vid = do+ vx <- M.lookup vid vmap+ _ <- M.lookup vid vmap'+ return $ StopVertex (Vertex vid (fst vx))+ -- TODO: it should be a try, although it is a programming error here+ combineWithFringe :: AutocacheVertex v -> (AutocacheVertex v, [StopVertex v])+ combineWithFringe acv @ (AutocacheVertex vx) =+ let vids = M.findWithDefault [] (AnyCacheOp (vertexId vx)) acWithFringe+ in (acv, mapMaybe findStop vids)+ -- Remove the nodes that do not have a fringe.+ -- In this case, they are passed through without uncaching operation.+ acWithFringeVx = filter (not.null.snd) $ combineWithFringe <$> acVxs+ in acWithFringeVx++_checkCaching :: Graph NodeCachingType StructureEdge -> CacheTry [CachingFailure]+_checkCaching cg =+ let+ expands = snd <$> vertexMap (_expansions cg)+ removals = vertexMap $ _removals cg+ f :: NodeCachingType -> [(VertexId, VertexId)]+ f (UncacheOp uncacheNid cacheNid) = [(cacheNid, uncacheNid)]+ f _ = []+ -- cacheNID -> uncacheNID+ removedNodes = M.fromList $ concatMap f (vertexData <$> gVertices cg)+ removedNodeSet = S.fromList $ M.keys removedNodes+ checkErrors :: VertexId -> [CachingFailure]+ checkErrors nid =+ let rems = S.intersection+ removedNodeSet+ (M.findWithDefault S.empty nid removals)+ exps = S.intersection+ removedNodeSet+ (unAnyCacheOp `S.map` M.findWithDefault S.empty nid expands)+ bad = S.toList $ S.difference exps rems+ badWithUncache = flip mapMaybe bad $ \ cacheNid ->+ M.lookup cacheNid removedNodes <&> \uncacheNid ->+ CachingFailure cacheNid uncacheNid nid+ in badWithUncache+ in return $ concatMap checkErrors (vertexId <$> gVertices cg)++_cacheGraph :: (Show v) => Graph v StructureEdge ->+ (v -> CacheTry NodeCachingType) ->+ CacheTry (Graph NodeCachingType StructureEdge)+_cacheGraph g f =+ graphMapVertices g f' where+ f' vx _ = f vx++-- The set of node caching operations at each step.+-- This includes both regular cache and autocache.+_expansions :: (Show e) =>+ Graph NodeCachingType e ->+ Graph (NodeCachingType, Set AnyCacheOp) e+_expansions g = runIdentity (graphMapVertices g f) where+ f x l = return (x, S.union seta parentSet) where+ filt ((Stop, _), _) = S.empty+ -- Uncaching drops the caching node from the expansions+ filt ((UncacheOp _ cacheVid, s), _) = S.delete (AnyCacheOp cacheVid) s+ filt ((_, s), _) = s+ parentSet :: S.Set AnyCacheOp+ parentSet = S.unions (filt <$> l)+ seta = case x of+ CacheOp nid -> S.singleton (AnyCacheOp nid)+ AutocacheOp nid -> S.singleton (AnyCacheOp nid)+ _ -> S.empty++_removals :: (Show e) =>+ Graph NodeCachingType e -> Graph (Set VertexId) e+_removals g = runIdentity (graphMapVertices (reverseGraph g) f) where+ f x l = return $ S.union seta (S.unions (fst <$> l)) where+ seta = case x of+ UncacheOp _ cacheNid -> S.singleton cacheNid+ _ -> S.empty
+ src/Spark/Core/Internal/CachingUntyped.hs view
@@ -0,0 +1,61 @@+{-# LANGUAGE ScopedTypeVariables #-}+{-# LANGUAGE FlexibleContexts #-}+{-# LANGUAGE OverloadedStrings #-}+++{-| Implementation of the caching interfaces for the compute data structures.+-}+module Spark.Core.Internal.CachingUntyped(+ cachingType,+ autocacheGen+) where++import Control.Monad.Except++import Spark.Core.Internal.Caching+import Spark.Core.Internal.DatasetStructures+import Spark.Core.Internal.DatasetFunctions+import Spark.Core.Internal.OpStructures+import Spark.Core.Internal.PathsUntyped()+import Spark.Core.Internal.DAGStructures+import Spark.Core.StructuresInternal++cachingType :: UntypedNode -> CacheTry NodeCachingType+cachingType n = case nodeOp n of+ NodeLocalOp _ -> pure Stop+ NodeAggregatorReduction _ -> pure Stop+ NodeAggregatorLocalReduction _ -> pure Stop+ NodeOpaqueAggregator _ -> pure Stop+ NodeLocalLit _ _ -> pure Stop+ NodeStructuredTransform _ -> pure Through+ NodeDistributedLit _ _ -> pure Through+ NodeDistributedOp so | soName so == opnameCache ->+ pure $ CacheOp (vertexToId n)+ NodeDistributedOp so | soName so == opnameUnpersist ->+ case nodeParents n of+ [n'] -> pure $ UncacheOp (vertexToId n) (vertexToId n')+ _ -> throwError "Node is not valid uncache node"+ NodeDistributedOp so | soName so == opnameAutocache ->+ pure $ AutocacheOp (vertexToId n)+ NodeDistributedOp _ -> pure Through -- Nothing special for the other operations+ NodeBroadcastJoin -> pure Through+ NodeGroupedReduction _ -> pure Stop+ NodeReduction _ -> pure Stop+ NodePointer _ -> pure Stop -- It is supposed to be an observable++autocacheGen :: AutocacheGen UntypedNode+autocacheGen = AutocacheGen {+ deriveUncache = deriveUncache',+ deriveIdentity = deriveIdentity'+} where+ -- TODO: use path-based identification in the future+ -- f :: String -> VertexId -> VertexId+ -- f s (VertexId bs) = VertexId . C8.pack . (++s) . C8.unpack $ bs+ deriveIdentity' (Vertex _ un) =+ let x = identity un+ vid' = VertexId . unNodeId . nodeId $ x -- f "_identity" vid+ in Vertex vid' x+ deriveUncache' (Vertex _ un) =+ let x = uncache un+ vid' = VertexId . unNodeId . nodeId $ x -- f "_uncache" vid+ in Vertex vid' x
+ src/Spark/Core/Internal/CanRename.hs view
@@ -0,0 +1,84 @@+{-# OPTIONS_GHC -fno-warn-orphans #-}+{-# LANGUAGE IncoherentInstances #-}+{-# LANGUAGE ScopedTypeVariables #-}+{-# LANGUAGE MultiParamTypeClasses #-}+{-# LANGUAGE FlexibleInstances #-}+{-# LANGUAGE TypeFamilies #-}+{-# LANGUAGE OverloadedStrings #-}+{-# LANGUAGE FlexibleContexts #-}+{-# LANGUAGE RankNTypes #-}++-- TODO(kps): this module stretches my understanding of Haskell.+-- There is probably better than that.++{-| Defines the notion of renaming something.++This is closed over a few well-defined types.+-}+module Spark.Core.Internal.CanRename where++import qualified Data.Text as T+import Formatting++import Spark.Core.Try+import Spark.Core.StructuresInternal+import Spark.Core.Internal.ColumnFunctions()+import Spark.Core.Internal.ColumnStructures+import Spark.Core.Internal.DatasetStructures+import Spark.Core.Internal.Utilities++-- | The class of types that can be renamed.+-- It is made generic because it covers 2 notions:+-- - the name of a compute node that will eventually determine its compute path+-- - the name of field (which may become an object path)+-- This syntax tries to be convenient and will fail immediately+-- for basic errors such as illegal characters.+--+-- This could be revisited in the future, but it is a compromise+-- on readability.+class CanRename a txt where+ (@@) :: a -> txt -> a++infixl 1 @@+++instance forall ref a. CanRename (ColumnData ref a) FieldName where+ c @@ fn = c { _cReferingPath = Just fn }+++instance forall ref a s. (s ~ String) => CanRename (Column ref a) s where+ c @@ str = case fieldName (T.pack str) of+ Right fp -> c @@ fp+ Left msg ->+ -- The syntax check here is pretty lenient, so it fails, it has+ -- some good reasons. We stop here.+ failure $ sformat ("Could not make a field path out of string "%shown%" for column "%shown%":"%shown) str c msg++instance CanRename DynColumn FieldName where+ (Right cd) @@ fn = Right (cd @@ fn)+ -- TODO better error handling+ x @@ _ = x++instance forall s. (s ~ String) => CanRename DynColumn s where+ -- An error could happen when making a path out of a string.+ (Right cd) @@ str = case fieldName (T.pack str) of+ Right fp -> Right $ cd @@ fp+ Left msg ->+ -- The syntax check here is pretty lenient, so it fails, it has+ -- some good reasons. We stop here.+ tryError $ sformat ("Could not make a field path out of string "%shown%" for column "%shown%":"%shown) str cd msg+ -- TODO better error handling+ x @@ _ = x+++instance forall loc a s. (s ~ String) => CanRename (ComputeNode loc a) s where+ -- There is no need to update the id, as this field is not involved+ -- in the calculation of the id.+ -- TODO: make this fail immediately? If the name is wrong, it is+ -- harder to figure out what is happening.+ (@@) cn name = cn { _cnName = Just nn } where+ nn = NodeName . T.pack $ name++instance forall loc a s. (s ~ String) => CanRename (Try (ComputeNode loc a)) s where+ (Right n) @@ str = Right (n @@ str)+ (Left n) @@ _ = Left n
+ src/Spark/Core/Internal/Client.hs view
@@ -0,0 +1,143 @@+{-# LANGUAGE DeriveGeneric #-}+{-# LANGUAGE OverloadedStrings #-}+-- The communication protocol with the server++module Spark.Core.Internal.Client where++import Spark.Core.StructuresInternal+import Spark.Core.Dataset(UntypedNode)+import Spark.Core.Internal.Utilities+import Spark.Core.Internal.TypesStructures(DataType)+import Spark.Core.Internal.TypesFunctions()++import Data.Text(Text, pack)+import Data.Aeson+import Data.Aeson.Types(Parser)+import GHC.Generics+++-- Imports for the client++{-| The ID of an RDD in Spark.+-}+data RDDId = RDDId {+ unRDDId :: !Int+} deriving (Eq, Show, Ord)++data LocalSessionId = LocalSessionId {+ unLocalSession :: !Text+} deriving (Eq, Show)++data Computation = Computation {+ cSessionId :: !LocalSessionId,+ cId :: !ComputationID,+ cNodes :: ![UntypedNode],+ -- Non-empty+ cTerminalNodes :: ![NodePath],+ -- The node at the top of the computation.+ -- Must be part of the terminal nodes.+ cCollectingNode :: !NodePath,+ -- This redundant information is not serialized.+ -- It is used internally to track the resulting nodes.+ cTerminalNodeIds :: ![NodeId]+} deriving (Show, Generic)++data BatchComputationKV = BatchComputationKV {+ bckvLocalPath :: !NodePath,+ bckvDeps :: ![NodePath],+ bckvResult :: !PossibleNodeStatus+} deriving (Show, Generic)++data BatchComputationResult = BatchComputationResult {+ bcrTargetLocalPath :: !NodePath,+ bcrResults :: ![(NodePath, [NodePath], PossibleNodeStatus)]+} deriving (Show, Generic)++data RDDInfo = RDDInfo {+ rddiId :: !RDDId,+ rddiClassName :: !Text,+ rddiRepr :: !Text,+ rddiParents :: ![RDDId]+} deriving (Show, Generic)++data SparkComputationItemStats = SparkComputationItemStats {+ scisRddInfo :: ![RDDInfo]+} deriving (Show, Generic)++data PossibleNodeStatus =+ NodeQueued+ | NodeRunning+ | NodeFinishedSuccess !(Maybe NodeComputationSuccess) !(Maybe SparkComputationItemStats)+ | NodeFinishedFailure NodeComputationFailure deriving (Show, Generic)++data NodeComputationSuccess = NodeComputationSuccess {+ -- Because Row requires additional information to be deserialized.+ ncsData :: Value,+ -- The data type is also available, but it is not going to be parsed for now.+ ncsDataType :: DataType+} deriving (Show, Generic)++data NodeComputationFailure = NodeComputationFailure {+ ncfMessage :: !Text+} deriving (Show, Generic)+++-- **** AESON INSTANCES ***++instance ToJSON LocalSessionId where+ toJSON = toJSON . unLocalSession++instance FromJSON RDDId where+ parseJSON x = RDDId <$> parseJSON x++instance FromJSON RDDInfo where+ parseJSON = withObject "RDDInfo" $ \o -> do+ _id <- o .: "id"+ className <- o .: "className"+ repr <- o .: "repr"+ parents <- o .: "parents"+ return $ RDDInfo _id className repr parents++instance FromJSON SparkComputationItemStats where+ parseJSON = withObject "SparkComputationItemStats" $ \o -> do+ rddinfo <- o .: "rddInfo"+ return $ SparkComputationItemStats rddinfo++instance FromJSON BatchComputationKV where+ parseJSON = withObject "BatchComputationKV" $ \o -> do+ np <- o .: "localPath"+ deps <- o .: "pathDependencies"+ res <- o .: "result"+ return $ BatchComputationKV np deps res++instance FromJSON BatchComputationResult where+ parseJSON = withObject "BatchComputationResult" $ \o -> do+ kvs <- o .: "results"+ tlp <- o .: "targetLocalPath"+ let f (BatchComputationKV k d v) = (k, d, v)+ return $ BatchComputationResult tlp (f <$> kvs)++instance FromJSON NodeComputationSuccess where+ parseJSON = withObject "NodeComputationSuccess" $ \o -> NodeComputationSuccess+ <$> o .: "content"+ <*> o .: "type"++-- Because we get a row back, we need to supply a SQLType for deserialization.+instance FromJSON PossibleNodeStatus where+ parseJSON =+ let parseSuccess :: Object -> Parser PossibleNodeStatus+ parseSuccess o = NodeFinishedSuccess+ <$> o .:? "finalResult"+ <*> o .:? "stats"+ parseFailure :: Object -> Parser PossibleNodeStatus+ parseFailure o =+ (NodeFinishedFailure . NodeComputationFailure) <$> o .: pack "finalError"+ in+ withObject "PossibleNodeStatus" $ \o -> do+ status <- o .: pack "status"+ case pack status of+ "running" -> return NodeRunning+ "finished_success" -> parseSuccess o+ "finished_failure" -> parseFailure o+ "scheduled" -> return NodeQueued+ _ -> failure $ pack ("FromJSON PossibleNodeStatus " ++ show status)
+ src/Spark/Core/Internal/ColumnFunctions.hs view
@@ -0,0 +1,358 @@+{-# OPTIONS_GHC -fno-warn-orphans #-}+{-# LANGUAGE RankNTypes #-}+{-# LANGUAGE ScopedTypeVariables #-}+{-# LANGUAGE MultiParamTypeClasses #-}+{-# LANGUAGE FlexibleInstances #-}+{-# LANGUAGE TypeFamilies #-}+{-# LANGUAGE OverloadedStrings #-}+{-# LANGUAGE FlexibleContexts #-}++-- Implements a DSL for extracting some columns from dataframes and datasets.++module Spark.Core.Internal.ColumnFunctions(+ -- Accessors+ colType,+ colOrigin,+ colOp,+ colFieldName,+ -- Standard functions+ broadcast,+ broadcast',+ -- Internal API+ iUntypedColData,+ iEmptyCol,+ -- Developer API (projections)+ -- unsafeStaticProjection,+ dropColReference,+ dropColType,+ extractPathUnsafe,+ colExtraction,+ unsafeProjectCol,+ genColOp,+ homoColOp2,+ makeColOp1,+ -- -- Developer API (projection builders)+ -- dynamicProjection,+ -- stringToDynColProj,+ -- pathToDynColProj,+ -- colStaticProjToDynProj,+ -- -- Developer API (projection transformers)+ -- projectDSDyn,+ -- projectDFDyn,+ -- projectDsCol,+ -- projectColCol,+ -- projectColDynCol,+ -- projectDColDCol,+ -- Public functions+ applyCol1,+ untypedCol,+ colFromObs,+ colFromObs',+ castTypeCol,+ castCol,+ castCol',+ colRef+) where++import qualified Data.Text as T+import qualified Data.Text.Format as TF+import qualified Data.Vector as V+import Data.String(IsString(fromString))+import Data.Text.Lazy(toStrict)+import Data.Maybe(fromMaybe)+import Data.List(find)+import Formatting++import Spark.Core.Internal.ColumnStructures+import Spark.Core.Internal.DatasetFunctions+import Spark.Core.Internal.DatasetStructures+import Spark.Core.Internal.TypesStructures+import Spark.Core.StructuresInternal+import Spark.Core.Internal.TypesFunctions+import Spark.Core.Internal.OpStructures+import Spark.Core.Internal.OpFunctions(prettyShowColOp, prettyShowColFun)+import Spark.Core.Internal.AlgebraStructures+import Spark.Core.Internal.Utilities+import Spark.Core.Internal.TypesGenerics(SQLTypeable, buildType)+import Spark.Core.Try++-- ********** Public methods ********+++{-| The type of a column.+-}+colType :: Column ref a -> SQLType a+colType = SQLType . _cType++{-| Converts a type column to an antyped column.+-}+untypedCol :: Column ref a -> DynColumn+untypedCol = pure . dropColType . dropColReference++{-| Drops the type information, but kees the reference.+-}+dropColType :: Column ref a -> GenericColumn ref+dropColType = _unsafeCastColData++{-| Casts a dynamic column to a statically typed column.++In this case, one must supply the reference (which can be obtained from+another column with colRef, or from a dataset), and a type (which can be+built using the buildType function).+-}+castCol :: ColumnReference ref -> SQLType a -> DynColumn -> Try (Column ref a)+castCol r sqlt dc =+ dc >>= castTypeCol sqlt >>= _checkedCastRefColData r++{-| Casts a dynamic column to a statically typed column, but does not attempt+to enforce a single origin at the type level.++This is useful when building a dataset from a dataframe: the origin information+cannot be conveyed since it is not available in the first place.+-}+castCol' :: SQLType a -> DynColumn -> Try (Column UnknownReference a)+castCol' = castCol ColumnReference+++-- | (internal)+castTypeCol :: SQLType b -> ColumnData ref a -> Try (ColumnData ref b)+castTypeCol sqlt cd =+ if unSQLType sqlt == unSQLType (colType cd)+ then pure (_unsafeCastColData cd)+ else tryError $ sformat ("Cannot cast column "%sh%" to type "%sh) cd sqlt++{-| Takes some local data (contained in an observable) and broadacasts it along+a reference column.+-}+-- TODO: it would be more logical to swap the inputs+broadcast :: LocalData a -> Column ref b -> Column ref a+broadcast ld c = ColumnData {+ _cOrigin = colOrigin c,+ _cType = unSQLType (nodeType ld),+ _cOp = BroadcastColOp (untypedLocalData ld),+ _cReferingPath = Nothing+ }++broadcast' :: LocalFrame -> DynColumn -> DynColumn+broadcast' lf dc = do+ ld <- lf+ c <- dc+ return $ broadcast ld c++-- (internal)+colOrigin :: Column ref a -> UntypedDataset+colOrigin = _cOrigin++-- (internal)+colOp :: Column ref a -> GeneralizedColOp+colOp = _cOp++{-| A tag with the reference of a column.++This is useful when casting dynamic columns to typed columns.+-}+colRef :: Column ref a -> ColumnReference ref+colRef _ = ColumnReference++-- | Takes an observable and makes it available as a column of the same type.+colFromObs :: (HasCallStack) => LocalData a -> Column (LocalData a) a+colFromObs = missing "colFromObs"++-- | Takes a dynamic observable and makes it available as a dynamic column.+colFromObs' :: (HasCallStack) => LocalFrame -> DynColumn+colFromObs' = missing "colFromObs'"++-- | (internal)+colFieldName :: ColumnData ref a -> FieldName+colFieldName c =+ fromMaybe (unsafeFieldName . _prettyShowColOp . _cOp $ c)+ (_cReferingPath c)++{-| A converience function for applying one-argument typed functions to+dynamic column.+-}+applyCol1 :: forall x y. (SQLTypeable x) => (forall ref. Column ref x -> Column ref y) -> DynColumn -> DynColumn+applyCol1 f dc = do+ c <- dc+ let t = buildType :: SQLType x+ c1 <- castCol (colRef c) t dc+ let c2 = f c1+ untypedCol c2+++-- ******** Operations on column operations ********++genColOp :: ColOp -> GeneralizedColOp+genColOp (ColExtraction fp) = GenColExtraction fp+genColOp (ColFunction n v) = GenColFunction n (genColOp <$> v)+-- TODO: replace in the ColOp by Cell instead of JSON.+genColOp (ColLit dt _) = GenColLit dt (missing "genColOp (ColLit dt c)")+genColOp (ColStruct v) = GenColStruct (f <$> v) where+ f (TransformField n v') = GeneralizedTransField n (genColOp v')+++-- ********* Projection operations ***********+++-- ****** Functions that build projections *******+++iUntypedColData :: Column ref a -> UntypedColumnData+iUntypedColData = _unsafeCastColData . dropColReference++-- Recasts the column, trusting the user knows that the type is going to be compatible.+_unsafeCastColData :: Column ref a -> Column ref b+_unsafeCastColData c = c { _cType = _cType c }++_checkedCastColData :: SQLType b -> ColumnData ref a -> Try (ColumnData ref b)+_checkedCastColData sqlt cd =+ if unSQLType sqlt == unSQLType (colType cd)+ then pure (_unsafeCastColData cd)+ else tryError $ sformat ("Cannot cast column "%sh%" to type "%sh) cd sqlt++_checkedCastRefColData :: ColumnReference ref2 -> ColumnData ref a -> Try (ColumnData ref2 a)+_checkedCastRefColData _ cd =+ -- TODO: do some dynamic checks on the origin.+ pure $ cd { _cType = _cType cd }++++-- Performs the data projection. This is unsafe, it does not check that the+-- field path is valid in this case, nor that the final type is valid either.+unsafeProjectCol :: ColumnData ref a -> FieldPath -> DataType -> ColumnData ref b+unsafeProjectCol cd (FieldPath p) dtTo =+ -- If the column is already a projection, flatten it.+ case colOp cd of+ -- No previous parent on an extraction -> we can safely append to that one.+ GenColExtraction (FieldPath p') ->+ cd { _cOp = GenColExtraction . FieldPath $ (p V.++ p'),+ _cType = dtTo}+ _ ->+ -- Extract from the previous column.+ cd { _cOp = GenColExtraction . FieldPath $ p,+ _cType = dtTo}+++extractPathUnsafe :: SQLType from -> FieldPath -> Maybe (SQLType to)+extractPathUnsafe sqlt (FieldPath v) = _extractPath0 sqlt (V.toList v)++_extractPath0 :: SQLType from -> [FieldName] -> Maybe (SQLType to)+_extractPath0 sqlt [] = Just (unsafeCastType sqlt)+_extractPath0 sqlt (field : l) = do+ inner <- _extractField sqlt field+ _extractPath0 inner l++_extractField :: SQLType from -> FieldName -> Maybe (SQLType to)+_extractField (SQLType (StrictType (Struct (StructType fields)))) f =+ -- There is probably a way to make it shorter...+ let z = find (\x -> structFieldName x == f) fields in+ SQLType . structFieldType <$> z+_extractField (SQLType (NullableType (Struct (StructType fields)))) f =+ -- There is probably a way to make it shorter...+ let z = find (\x -> structFieldName x == f) fields in+ SQLType . structFieldType <$> z+_extractField _ _ = Nothing++dropColReference :: ColumnData ref a -> ColumnData UnknownReference a+dropColReference c = c {_cOp = _cOp c}++-- | (internal) creates a new column with some empty data+iEmptyCol :: Dataset a -> SQLType b -> FieldPath -> Column a b+iEmptyCol = _emptyColData++-- | (internal) Creates a new column with a dynamic type.+colExtraction :: Dataset a -> DataType -> FieldPath -> DynColumn+colExtraction ds dt fp = pure $ dropColReference $ _emptyColData ds (SQLType dt) fp++-- | Homogeneous operation betweet 2 columns.+homoColOp2 :: T.Text -> Column ref x -> Column ref x -> Column ref x+homoColOp2 opName c1 c2 =+ let co = GenColFunction opName (V.fromList (colOp <$> [c1, c2]))+ in ColumnData {+ _cOrigin = _cOrigin c1,+ _cType = _cType c1,+ _cOp = co,+ _cReferingPath = Nothing }++makeColOp1 :: T.Text -> SQLType y -> Column ref x -> Column ref y+makeColOp1 opName sqlt c =+ let co = GenColFunction opName (V.fromList (colOp <$> [c]))+ in ColumnData {+ _cOrigin = _cOrigin c,+ _cType = unSQLType sqlt,+ _cOp = co,+ _cReferingPath = Nothing }++_prettyShowColOp :: GeneralizedColOp -> T.Text+_prettyShowColOp (GenColExtraction fp) = prettyShowColOp (ColExtraction fp)+_prettyShowColOp (GenColFunction n v) =+ prettyShowColFun n (V.toList (_prettyShowColOp <$> v))+_prettyShowColOp (GenColLit _ c) = show' c+_prettyShowColOp (BroadcastColOp uld) =+ "BROADCAST(" <> prettyNodePath (nodePath uld) <> ")"+_prettyShowColOp (GenColStruct v) =+ "struct(" <> T.intercalate "," (_prettyShowColOp . gtfValue <$> V.toList v) <> ")"++-- A new column data structure.+_emptyColData :: Dataset a -> SQLType b -> FieldPath -> ColumnData a b+_emptyColData ds sqlt path = ColumnData {+ _cOrigin = untypedDataset ds,+ _cType = unSQLType sqlt,+ _cOp = GenColExtraction path,+ _cReferingPath = Nothing+}++_homoColOp2' :: T.Text -> DynColumn -> DynColumn -> DynColumn+_homoColOp2' opName c1' c2' = do+ c1 <- c1'+ c2 <- c2'+ -- TODO check same origin+ return $ homoColOp2 opName c1 c2++-- ******** Displaying and pretty printing ************++instance forall ref a. Show (Column ref a) where+ show c =+ let+ name = case _cReferingPath c of+ Just fn -> show' fn+ Nothing -> _prettyShowColOp . colOp $ c+ txt = fromString "{}{{}}->{}" :: TF.Format+ -- path = T.pack . show . _cReferingPath $ c+ -- no = prettyShowColOp . colOp $ c+ fields = T.pack . show . colType $ c+ nn = prettyNodePath . nodePath . _cOrigin $ c+ in T.unpack $ toStrict $ TF.format txt (name, fields, nn)++-- *********** Arithmetic operations **********+++instance forall a. HomoBinaryOp2 a a a where+ _liftFun = BinaryOpFun id id++instance forall ref a. HomoBinaryOp2 (Column ref a) DynColumn DynColumn where+ _liftFun = BinaryOpFun untypedCol id++instance forall ref a. HomoBinaryOp2 DynColumn (Column ref a) DynColumn where+ _liftFun = BinaryOpFun id untypedCol++instance (Fractional x) => Fractional (Column ref x) where+ (/) = homoColOp2 "/"+ recip = missing "Fractional (Column ref x): recip"+ fromRational = missing "Fractional (Column ref x): fromRational"++instance (Num x) => Num (Column ref x) where+ (+) = homoColOp2 "+"+ (*) = homoColOp2 "*"+ abs _ = missing "Num (Column x): abs"+ signum _ = missing "Num (Column x): signum"+ fromInteger _ = missing "Num (Column x): fromInteger"+ negate _ = missing "Num (Column x): negate"++instance Num DynColumn where+ (+) = _homoColOp2' "+"+ (*) = _homoColOp2' "*"+ abs _ = missing "Num (DynColumn x): abs"+ signum _ = missing "Num (DynColumn x): signum"+ fromInteger _ = missing "Num (DynColumn x): fromInteger"+ negate _ = missing "Num (DynColumn x): negate"
+ src/Spark/Core/Internal/ColumnStandard.hs view
@@ -0,0 +1,22 @@+{-# OPTIONS_GHC -fno-warn-orphans #-}+{-# LANGUAGE RankNTypes #-}+{-# LANGUAGE ScopedTypeVariables #-}+{-# LANGUAGE MultiParamTypeClasses #-}+{-# LANGUAGE FlexibleInstances #-}+{-# LANGUAGE TypeFamilies #-}+{-# LANGUAGE OverloadedStrings #-}+{-# LANGUAGE FlexibleContexts #-}++{-| The standard library of functions operating on columns only.+-}+module Spark.Core.Internal.ColumnStandard(+ asDoubleCol+) where+++import Spark.Core.Internal.ColumnStructures+import Spark.Core.Internal.ColumnFunctions+import Spark.Core.Internal.TypesGenerics(buildType)++asDoubleCol :: (Num a) => Column ref a -> Column ref Double+asDoubleCol = makeColOp1 "double" buildType
+ src/Spark/Core/Internal/ColumnStructures.hs view
@@ -0,0 +1,103 @@+{-# LANGUAGE MultiParamTypeClasses #-}+{-# LANGUAGE RankNTypes #-}+{-# LANGUAGE OverloadedStrings #-}+{-# LANGUAGE FlexibleInstances #-}+{-# LANGUAGE ScopedTypeVariables #-}++module Spark.Core.Internal.ColumnStructures where++import Control.Arrow ((&&&))+import Data.Function(on)+import Data.Vector(Vector)++import Spark.Core.Internal.DatasetStructures+import Spark.Core.Internal.DatasetFunctions()+import Spark.Core.Internal.RowStructures+import Spark.Core.Internal.TypesStructures+import Spark.Core.Internal.OpStructures+import Spark.Core.StructuresInternal+import Spark.Core.Try++{-| The data structure that implements the notion of data columns.++The type on this one may either be a Cell or a proper type.++A column of data from a dataset+The ref is a reference potentially to the originating+dataset, but it may be more general than that to perform+type-safe tricks.++Unlike Spark, columns are always attached to a reference dataset or dataframe.+One cannot materialize a column out of thin air. In order to broadcast a value+along a given column, the `broadcast` function is provided.++TODO: try something like this https://www.vidarholen.net/contents/junk/catbag.html+-}+data ColumnData ref a = ColumnData {+ _cOrigin :: !UntypedDataset,+ _cType :: !DataType,+ _cOp :: !GeneralizedColOp,+ -- The name in the dataset.+ -- If not set, it will be deduced from the operation.+ _cReferingPath :: !(Maybe FieldName)+}++{-| A generalization of the column operation.++This structure is useful to performn some extra operations not supported by+the Spark engine:+ - express joins with an observable+ - keep track of DAGs of column operations (not implemented yet)+-}+data GeneralizedColOp =+ GenColExtraction !FieldPath+ | GenColFunction !SqlFunctionName !(Vector GeneralizedColOp)+ | GenColLit !DataType !Cell+ -- This is the extra operation that needs to be flattened with a broadcast.+ | BroadcastColOp !UntypedLocalData+ | GenColStruct !(Vector GeneralizedTransField)+ deriving (Eq, Show)++data GeneralizedTransField = GeneralizedTransField {+ gtfName :: !FieldName,+ gtfValue :: !GeneralizedColOp+} deriving (Eq, Show)++{-| A column of data from a dataset or a dataframe.++This column is typed: the operations on this column will be+validdated by Haskell' type inferenc.+-}+type Column ref a = ColumnData ref a++{-| An untyped column of data from a dataset or a dataframe.++This column is untyped and may not be properly constructed. Any error+will be found during the analysis phase at runtime.+-}+type DynColumn = Try (ColumnData UnknownReference Cell)+++-- | (dev)+-- The type of untyped column data.+type UntypedColumnData = ColumnData UnknownReference Cell++{-| (dev)+A column for which the type of the cells is unavailable (at the type level),+ but for which the origin is available at the type level.+-}+type GenericColumn ref = Column ref Cell++{-| A dummy data type that indicates the data referenc is missing.+-}+data UnknownReference++{-| A tag that carries the reference information of a column at a+type level. This is useful when creating column.++See ref and colRef.+-}+data ColumnReference a = ColumnReference++instance forall ref a. Eq (ColumnData ref a) where+ (==) = (==) `on` (_cOrigin &&& _cType &&& _cOp &&& _cReferingPath)
+ src/Spark/Core/Internal/ComputeDag.hs view
@@ -0,0 +1,82 @@+++module Spark.Core.Internal.ComputeDag where++import Data.Foldable(toList)+import qualified Data.Map.Strict as M+import qualified Data.Vector as V+import Data.Vector(Vector)++import Spark.Core.Internal.DAGStructures+import Spark.Core.Internal.DAGFunctions++{-| A DAG of computation nodes.++At a high level, it is a total function with a number of inputs and a number+of outputs.++Note about the edges: the edges flow along the path of dependencies:+the inputs are the start points, and the outputs are the end points of the+graph.++-}+data ComputeDag v e = ComputeDag {+ -- The edges that make up the DAG+ cdEdges :: !(AdjacencyMap v e),+ -- All the vertices of the graph+ -- Sorted by lexicographic order + node id for uniqueness+ cdVertices :: !(Vector (Vertex v)),+ -- The inputs of the computation graph. These correspond to the+ -- sinks of the dependency graph.+ cdInputs :: !(Vector (Vertex v)),+ -- The outputs of the computation graph. These correspond to the+ -- sources of the dependency graph.+ cdOutputs :: !(Vector (Vertex v))+} deriving (Show)+++-- | Conversion+computeGraphToGraph :: ComputeDag v e -> Graph v e+computeGraphToGraph cg =+ Graph (cdEdges cg) (cdVertices cg)++-- | Conversion+graphToComputeGraph :: Graph v e -> ComputeDag v e+graphToComputeGraph g =+ ComputeDag {+ cdEdges = gEdges g,+ cdVertices = gVertices g,+ -- We work on the graph of dependencies (not flows)+ -- The sources correspond to the outputs.+ cdInputs = V.fromList $ graphSinks g,+ cdOutputs = V.fromList $ graphSources g+ }++_mapVerticesAdj :: (Vertex v -> v') -> AdjacencyMap v e -> AdjacencyMap v' e+_mapVerticesAdj f m =+ let f1 ve =+ let vx = veEndVertex ve+ d' = f vx in+ ve { veEndVertex = vx { vertexData = d' } }+ f' v = f1 <$> v+ in M.map f' m++mapVertices :: (Vertex v -> v') -> ComputeDag v e -> ComputeDag v' e+mapVertices f cd =+ let f' vx = vx { vertexData = f vx }+ in ComputeDag {+ cdEdges = _mapVerticesAdj f (cdEdges cd),+ cdVertices = f' <$> cdVertices cd,+ cdInputs = f' <$> cdInputs cd,+ cdOutputs = f' <$> cdOutputs cd+ }++mapVertexData :: (v -> v') -> ComputeDag v e -> ComputeDag v' e+mapVertexData f = mapVertices (f . vertexData)++buildCGraph :: (GraphOperations v e, Show v) =>+ v -> DagTry (ComputeDag v e)+buildCGraph n = graphToComputeGraph <$> buildGraph n++graphDataLexico :: ComputeDag v e -> [v]+graphDataLexico cd = vertexData <$> toList (cdVertices cd)
+ src/Spark/Core/Internal/ContextIOInternal.hs view
@@ -0,0 +1,380 @@+{-# LANGUAGE OverloadedStrings #-}+{-# LANGUAGE ScopedTypeVariables #-}+{-# LANGUAGE FlexibleContexts #-}+{-# LANGUAGE DeriveGeneric #-}++module Spark.Core.Internal.ContextIOInternal(+ returnPure,+ createSparkSession,+ createSparkSession',+ executeCommand1,+ executeCommand1',+ checkDataStamps,+ updateSourceInfo,+ createComputation,+ computationStats+) where++import Control.Concurrent(threadDelay)+import Control.Lens((^.))+import Control.Monad.State(mapStateT, get)+import Control.Monad(forM, forM_)+import Data.Aeson(toJSON, FromJSON)+import Data.Functor.Identity(runIdentity)+import Data.Text(Text, pack)+import qualified Data.Text as T+import qualified Network.Wreq as W+import Network.Wreq(responseBody)+import Control.Monad.Trans(lift)+import Control.Monad.Logger(runStdoutLoggingT, LoggingT, logDebugN, logInfoN, MonadLoggerIO)+import System.Random(randomIO)+import Data.Word(Word8)+import Data.Maybe(mapMaybe)+import Control.Monad.IO.Class+import GHC.Generics+-- import Formatting+import Network.Wreq.Types(Postable)+import Data.ByteString.Lazy(ByteString)+import qualified Data.HashMap.Strict as HM+import qualified Data.HashSet as HS++import Spark.Core.Dataset+import Spark.Core.Internal.Client+import Spark.Core.Internal.ContextInternal+import Spark.Core.Internal.ContextStructures+import Spark.Core.Internal.DatasetFunctions(untypedLocalData, nodePath)+import Spark.Core.Internal.DatasetStructures(UntypedLocalData)+import Spark.Core.Internal.OpStructures(DataInputStamp(..))+import Spark.Core.Row+import Spark.Core.StructuresInternal+import Spark.Core.Try+import Spark.Core.Types+import Spark.Core.Internal.Utilities++returnPure :: forall a. SparkStatePure a -> SparkState a+returnPure p = lift $ mapStateT (return . runIdentity) p++{- | Creates a new Spark session.++This session is unique, and it will not try to reconnect to an existing+session.+-}+createSparkSession :: (MonadLoggerIO m) => SparkSessionConf -> m SparkSession+createSparkSession conf = do+ sessionName <- case confRequestedSessionName conf of+ "" -> liftIO _randomSessionName+ x -> pure x+ let session = _createSparkSession conf sessionName 0+ let url = _sessionEndPoint session+ logDebugN $ "Creating spark session at url: " <> url+ -- TODO get the current counter from remote+ _ <- _ensureSession session+ return session++{-| Convenience function for simple cases that do not require monad stacks.+-}+createSparkSession' :: SparkSessionConf -> IO SparkSession+createSparkSession' = _runLogger . createSparkSession++{- |+Executes a command:+- performs the transforms and the optimizations in the pure state+- sends the computation to the backend+- waits for the terminal nodes to reach a final state+- commits the final results to the state++If any failure is detected that is internal to Karps, it returns an error.+If the error comes from an underlying library (http stack, programming failure),+an exception may be thrown instead.+-}+executeCommand1 :: forall a. (FromSQL a) =>+ LocalData a -> SparkState (Try a)+executeCommand1 ld = do+ tcell <- executeCommand1' (untypedLocalData ld)+ return $ tcell >>= (tryEither . cellToValue)++-- The main function to launch computations.+executeCommand1' :: UntypedLocalData -> SparkState (Try Cell)+executeCommand1' ld = do+ logDebugN $ "executeCommand1': computing observable " <> show' ld+ -- Retrieve the computation graph+ let cgt = buildComputationGraph ld+ _ret cgt $ \cg -> do+ cgWithSourceT <- updateSourceInfo cg+ _ret cgWithSourceT $ \cgWithSource -> do+ -- Update the computations with the stamps, and build the computation.+ compt <- createComputation cgWithSource+ _ret compt $ \comp -> do+ -- Run the computation.+ session <- get+ _ <- _sendComputation session comp+ waitForCompletion comp++waitForCompletion :: Computation -> SparkState (Try Cell)+waitForCompletion comp = do+ -- We track all the observables, instead of simply the targets.+ let obss = getObservables comp+ let trackedNodes = obss <&> \n ->+ (nodeId n, nodePath n,+ unSQLType (nodeType n), nodePath n)+ nrs' <- _computationMultiStatus (cId comp) HS.empty trackedNodes+ -- Find the main result again in the list of everything.+ -- TODO: we actually do not need all the results, just target nodes.+ let targetNid = case cTerminalNodeIds comp of+ [nid] -> nid+ -- TODO: handle the case of multiple terminal targets+ l -> missing $ "waitForCompletion: missing multilist case with " <> show' l+ case filter (\z -> fst z == targetNid) nrs' of+ [(_, tc)] -> return tc+ l -> return $ tryError $ "Expected single result, got " <> show' l++{-| Exposed for debugging -}+computationStats ::+ ComputationID -> SparkState BatchComputationResult+computationStats cid = do+ logDebugN $ "computationStats: stats for " <> show' cid+ session <- get+ _computationStats session cid++{-| Exposed for debugging -}+createComputation :: ComputeGraph -> SparkState (Try Computation)+createComputation cg = returnPure $ prepareComputation cg++{-| Exposed for debugging -}+updateSourceInfo :: ComputeGraph -> SparkState (Try ComputeGraph)+updateSourceInfo cg = do+ let sources = inputSourcesRead cg+ if null sources+ then return (pure cg)+ else do+ logDebugN $ "updateSourceInfo: found sources " <> show' sources+ -- Get the source stamps. Any error at this point is considered fatal.+ stampsRet <- checkDataStamps sources+ logDebugN $ "updateSourceInfo: retrieved stamps " <> show' stampsRet+ let stampst = sequence $ _f <$> stampsRet+ let cgt = insertSourceInfo cg =<< stampst+ return cgt+++_ret :: Try a -> (a -> SparkState (Try b)) -> SparkState (Try b)+_ret (Left x) _ = return (Left x)+_ret (Right x) f = f x++_f :: (a, Try b) -> Try (a, b)+_f (x, t) = case t of+ Right u -> Right (x, u)+ Left e -> Left e++data StampReturn = StampReturn {+ stampReturnPath :: !Text,+ stampReturnError :: !(Maybe Text),+ stampReturn :: !(Maybe Text)+} deriving (Eq, Show, Generic)++instance FromJSON StampReturn++{-| Given a list of paths, checks each of these paths on the file system of the+given Spark cluster to infer the status of these resources.++The primary role of this function is to check how recent these resources are+compared to some previous usage.+-}+checkDataStamps :: [HdfsPath] -> SparkState [(HdfsPath, Try DataInputStamp)]+checkDataStamps l = do+ session <- get+ let url = _sessionResourceCheck session+ status <- liftIO (W.asJSON =<< W.post (T.unpack url) (toJSON l) :: IO (W.Response [StampReturn]))+ let s = status ^. responseBody+ return $ mapMaybe _parseStamp s+++_parseStamp :: StampReturn -> Maybe (HdfsPath, Try DataInputStamp)+_parseStamp sr = case (stampReturn sr, stampReturnError sr) of+ (Just s, _) -> pure (HdfsPath (stampReturnPath sr), pure (DataInputStamp s))+ (Nothing, Just err) -> pure (HdfsPath (stampReturnPath sr), tryError err)+ _ -> Nothing -- No error being returned for now, we just discard it.++_randomSessionName :: IO Text+_randomSessionName = do+ ws <- forM [1..10] (\(_::Int) -> randomIO :: IO Word8)+ let ints = (`mod` 10) <$> ws+ return . T.pack $ "session" ++ concat (show <$> ints)++type DefLogger a = LoggingT IO a++_runLogger :: DefLogger a -> IO a+_runLogger = runStdoutLoggingT++_post :: (MonadIO m, Postable a) =>+ Text -> a -> m (W.Response ByteString)+_post url = liftIO . W.post (T.unpack url)++_get :: (MonadIO m) =>+ Text -> m (W.Response ByteString)+_get url = liftIO $ W.get (T.unpack url)++-- TODO move to more general utilities+-- Performs repeated polling until the result can be converted+-- to a certain other type.+-- Int controls the delay in milliseconds between each poll.+_pollMonad :: (MonadIO m) => m a -> Int -> (a -> Maybe b) -> m b+_pollMonad rec delayMillis check = do+ curr <- rec+ case check curr of+ Just res -> return res+ Nothing -> do+ _ <- liftIO $ threadDelay (delayMillis * 1000)+ _pollMonad rec delayMillis check+++-- Creates a new session from a string containing a session ID.+_createSparkSession :: SparkSessionConf -> Text -> Integer -> SparkSession+_createSparkSession conf sessionId idx =+ SparkSession conf sid idx HM.empty where+ sid = LocalSessionId sessionId++_port :: SparkSession -> Text+_port = pack . show . confPort . ssConf++-- The URL of the end point+_sessionEndPoint :: SparkSession -> Text+_sessionEndPoint sess =+ let port = _port sess+ sid = (unLocalSession . ssId) sess+ in+ T.concat [+ (confEndPoint . ssConf) sess, ":", port,+ "/sessions/", sid]++_sessionResourceCheck :: SparkSession -> Text+_sessionResourceCheck sess =+ let port = _port sess+ sid = (unLocalSession . ssId) sess+ in+ T.concat [+ (confEndPoint . ssConf) sess, ":", port,+ "/resources_status/", sid]++_sessionPortText :: SparkSession -> Text+_sessionPortText = pack . show . confPort . ssConf++-- The URL of the computation end point+_compEndPoint :: SparkSession -> ComputationID -> Text+_compEndPoint sess compId =+ let port = _sessionPortText sess+ sid = (unLocalSession . ssId) sess+ cid = unComputationID compId+ in+ T.concat [+ (confEndPoint . ssConf) sess, ":", port,+ "/computations/", sid, "/", cid]++-- The URL of the status of a computation+_compEndPointStatus :: SparkSession -> ComputationID -> Text+_compEndPointStatus sess compId =+ let port = _sessionPortText sess+ sid = (unLocalSession . ssId) sess+ cid = unComputationID compId+ in+ T.concat [+ (confEndPoint . ssConf) sess, ":", port,+ "/computations_status/", sid, "/", cid]++-- Ensures that the server has instantiated a session with the given ID.+_ensureSession :: (MonadLoggerIO m) => SparkSession -> m ()+_ensureSession session = do+ let url = _sessionEndPoint session <> "/create"+ _ <- _post url (toJSON 'a')+ return ()+++_sendComputation :: (MonadLoggerIO m) => SparkSession -> Computation -> m ()+_sendComputation session comp = do+ let base' = _compEndPoint session (cId comp)+ let url = base' <> "/create"+ logInfoN $ "Sending computations at url: " <> url <> "with nodes: " <> show' (cNodes comp)+ _ <- _post url (toJSON (cNodes comp))+ return ()++_computationStatus :: (MonadLoggerIO m) =>+ SparkSession -> ComputationID -> NodePath -> m PossibleNodeStatus+_computationStatus session compId npath = do+ let base' = _compEndPointStatus session compId+ let rest = prettyNodePath npath+ let url = base' <> rest+ _ <- _get url+ status <- liftIO (W.asJSON =<< W.get (T.unpack url) :: IO (W.Response PossibleNodeStatus))+ let s = status ^. responseBody+ return s++-- TODO: not sure how this works when trying to make a fix point: is it going to+-- blow up the 'stack'?+_computationMultiStatus ::+ -- The computation being run+ ComputationID ->+ -- The set of nodes that have been processed in this computation, and ended+ -- with a success.+ -- TODO: should we do all the nodes processed in this computation?+ HS.HashSet NodeId ->+ -- The list of nodes for which we have not had completion information so far.+ [(NodeId, NodePath, DataType, NodePath)] ->+ SparkState [(NodeId, Try Cell)]+_computationMultiStatus _ _ [] = return []+_computationMultiStatus cid done l = do+ session <- get+ -- Find the nodes that still need processing (i.e. that have not previously+ -- finished with a success)+ let f (nid, _, _, _) = not $ HS.member nid done+ let needsProcessing = filter f l+ -- Poll a bunch of nodes to try to get a status update.+ let statusl = _try (_computationStatus session cid) <$> needsProcessing :: [SparkState (NodeId, NodePath, DataType, PossibleNodeStatus)]+ status <- sequence statusl+ -- Update the state with the new data+ (updated, statusUpdate) <- returnPure $ updateCache cid status+ forM_ statusUpdate $ \(p, s) -> case s of+ NodeCacheSuccess ->+ logInfoN $ "_computationMultiStatus: " <> prettyNodePath p <> " finished"+ NodeCacheError ->+ logInfoN $ "_computationMultiStatus: " <> prettyNodePath p <> " finished (ERROR)"+ NodeCacheRunning ->+ logInfoN $ "_computationMultiStatus: " <> prettyNodePath p <> " running"+ -- Filter out the updated nodes, so that we do not ask for them again.+ let updatedNids = HS.union done (HS.fromList (fst <$> updated))+ let g (nid, _, _, _) = not $ HS.member nid updatedNids+ let stillNeedsProcessing = filter g needsProcessing+ -- Do not block uselessly if we have nothing else to do+ if null stillNeedsProcessing+ then return updated+ else do+ let delayMillis = confPollingIntervalMillis $ ssConf session+ _ <- liftIO $ threadDelay (delayMillis * 1000)+ -- TODO: this chaining is certainly not tail-recursive+ -- How much of a memory leak is it?+ reminder <- _computationMultiStatus cid updatedNids stillNeedsProcessing+ return $ updated ++ reminder++_try :: (Monad m) => (y -> m z) -> (x, x', x'', y) -> m (x, x', x'', z)+_try f (x, x', x'', y) = f y <&> \z -> (x, x', x'', z)++_computationStats :: (MonadLoggerIO m) =>+ SparkSession -> ComputationID -> m BatchComputationResult+_computationStats session compId = do+ let url = _compEndPointStatus session compId <> "/" -- The final / is mandatory+ logDebugN $ "Sending computations stats request at url: " <> url+ stats <- liftIO (W.asJSON =<< W.get (T.unpack url) :: IO (W.Response BatchComputationResult))+ let s = stats ^. responseBody+ return s+++_waitSingleComputation :: (MonadLoggerIO m) =>+ SparkSession -> Computation -> NodePath -> m FinalResult+_waitSingleComputation session comp npath =+ let+ extract :: PossibleNodeStatus -> Maybe FinalResult+ extract (NodeFinishedSuccess (Just s) _) = Just $ Right s+ extract (NodeFinishedFailure f) = Just $ Left f+ extract _ = Nothing+ getStatus = _computationStatus session (cId comp) npath+ i = confPollingIntervalMillis $ ssConf session+ in+ _pollMonad getStatus i extract
+ src/Spark/Core/Internal/ContextInteractive.hs view
@@ -0,0 +1,159 @@+{-# LANGUAGE OverloadedStrings #-}+{-# LANGUAGE FlexibleContexts #-}++-- | Functions to create and manipulate one default context.+--+-- This is most appropriate when working in an interactive session,+-- during which it is usually clear that there is a single+-- Spark context in use.+--+-- This module uses unsafe Haskell code that should not be used+-- outside prototyping in an interactive REPL. In any good case,+-- you should use the SparkState monad.+module Spark.Core.Internal.ContextInteractive(+ SparkInteractiveException,+ createSparkSessionDef,+ exec1Def,+ exec1Def',+ closeSparkSessionDef,+ execStateDef,+ computationStatsDef,+ currentSessionDef+) where++import qualified Data.Vector as V+import Control.Exception+import Control.Monad.Catch(throwM)+import Data.IORef+import Data.Typeable+import Control.Monad.State(runStateT)+import Data.Text+import System.IO.Unsafe(unsafePerformIO)+import Control.Monad.Logger(runStdoutLoggingT)+++import Spark.Core.Internal.Client(BatchComputationResult)+import Spark.Core.Internal.ContextStructures+import Spark.Core.Internal.DatasetStructures+import Spark.Core.Internal.DatasetFunctions(untypedLocalData)+import Spark.Core.Internal.ContextIOInternal+import Spark.Core.Internal.RowGenericsFrom(FromSQL, cellToValue)+import Spark.Core.Internal.RowStructures(Cell)+import Spark.Core.StructuresInternal+import Spark.Core.Try++-- The global session reference. Should not be accessed outside+-- this file.+_globalSessionRef :: IORef (Maybe SparkSession)+{-# NOINLINE _globalSessionRef #-}+_globalSessionRef = unsafePerformIO (newIORef Nothing)++-- | The exception thrown when a request cannot be completed+-- in an interactive session.+data SparkInteractiveException = SparkInteractiveException {+ _sieInner :: NodeError+} deriving Typeable++instance Show SparkInteractiveException where+ show (SparkInteractiveException inner) =+ show inner++instance Exception SparkInteractiveException++{- | Creates a spark session that will be used as the default session.++If a session already exists, an exception will be thrown.+ -}+createSparkSessionDef :: SparkSessionConf -> IO ()+createSparkSessionDef conf = do+ current <- _currentSession+ case current of+ Nothing ->+ return ()+ Just _ ->+ -- TODO let users change the state+ _throw "A default context already exist. If you wish to modify the exsting context, you must use modifySparkConfDef"+ new <- createSparkSession' conf+ _setSession new+ return ()++{- | Executes a command using the default spark session.++This is the most unsafe way of running a command:+it executes a command using the default spark session, and+throws an exception if any error happens.+ -}+exec1Def :: (FromSQL a) => LocalData a -> IO a+exec1Def ld = do+ c <- exec1Def' (pure (untypedLocalData ld))+ _forceEither $ cellToValue c++exec1Def' :: LocalFrame -> IO Cell+exec1Def' lf = do+ ld <- _getOrThrow lf+ res <- execStateDef (executeCommand1' ld)+ _getOrThrow res++{-| Runs the computation described in the state transform, using the default+Spark session.++Will throw an exception if no session currently exists.+-}+execStateDef :: SparkState a -> IO a+execStateDef s = do+ ctx <- _currentSessionOrThrow+ (res, newSt) <- (runStateT . runStdoutLoggingT) s ctx+ _setSession newSt+ return res++{-| Closes the default session. The default session is empty after this call+completes.++NOTE: This does not currently clear up the resources! It is a stub implementation+used in testing.+-}+closeSparkSessionDef :: IO ()+closeSparkSessionDef = do+ _ <- _removeSession+ return ()++computationStatsDef :: ComputationID -> IO BatchComputationResult+computationStatsDef compId = execStateDef (computationStats compId)++currentSessionDef :: IO (Maybe SparkSession)+currentSessionDef = _currentSession++_currentSession :: IO (Maybe SparkSession)+_currentSession = readIORef _globalSessionRef++_setSession :: SparkSession -> IO ()+_setSession st = writeIORef _globalSessionRef (Just st)++_removeSession :: IO (Maybe SparkSession)+_removeSession = do+ current <- _currentSession+ _ <- writeIORef _globalSessionRef Nothing+ return current++_currentSessionOrThrow :: IO SparkSession+_currentSessionOrThrow = do+ mCtx <- _currentSession+ case mCtx of+ Nothing ->+ _throw "No default context found. You must first create a default spark context with createSparkSessionDef"+ Just ctx -> return ctx+++_getOrThrow :: Try a -> IO a+_getOrThrow (Right x) = return x+_getOrThrow (Left err) = throwM (SparkInteractiveException err)++_forceEither :: Either Text a -> IO a+_forceEither = _getOrThrow . tryEither++_throw :: Text -> IO a+_throw txt = throwM $+ SparkInteractiveException Error {+ ePath = NodePath V.empty,+ eMessage = txt+ }
+ src/Spark/Core/Internal/ContextInternal.hs view
@@ -0,0 +1,268 @@+{-# LANGUAGE OverloadedStrings #-}+{-# LANGUAGE FlexibleContexts #-}+{-# LANGUAGE TupleSections #-}++-- Functions to build the graph of computations.+-- The following steps are performed:+-- - typing checking+-- - caching checks+-- - building the final json+--+-- All the functions in this module are pure and use SparkStatePure for transforms.++module Spark.Core.Internal.ContextInternal(+ FinalResult,+ inputSourcesRead,+ prepareComputation,+ buildComputationGraph,+ performGraphTransforms,+ getTargetNodes,+ getObservables,+ insertSourceInfo,+ updateCache+) where++import Control.Monad.State(get, put)+import Control.Monad(when)+import Data.Text(pack)+import Data.Maybe(mapMaybe, catMaybes)+import Data.Either(isRight)+import Data.Foldable(toList)+import Control.Arrow((&&&))+import Formatting+import qualified Data.Map.Strict as M+import qualified Data.HashMap.Strict as HM++import Spark.Core.Dataset+import Spark.Core.Try+import Spark.Core.Row+import Spark.Core.Types+import Spark.Core.StructuresInternal(NodeId, NodePath, ComputationID(..))+import Spark.Core.Internal.Caching+import Spark.Core.Internal.CachingUntyped+import Spark.Core.Internal.ContextStructures+import Spark.Core.Internal.Client+import Spark.Core.Internal.ComputeDag+import Spark.Core.Internal.PathsUntyped+import Spark.Core.Internal.Pruning+import Spark.Core.Internal.OpFunctions(hdfsPath, updateSourceStamp)+import Spark.Core.Internal.OpStructures(HdfsPath(..), DataInputStamp)+-- Required to import the instances.+import Spark.Core.Internal.Paths()+import Spark.Core.Internal.DAGFunctions(buildVertexList, graphMapVertices)+import Spark.Core.Internal.DAGStructures+import Spark.Core.Internal.DatasetFunctions+import Spark.Core.Internal.DatasetStructures+import Spark.Core.Internal.Utilities++-- The result from querying the status of a computation+type FinalResult = Either NodeComputationFailure NodeComputationSuccess++{-| Given a context for the computation and a graph of computation, builds a+computation object.+-}+prepareComputation ::+ ComputeGraph ->+ SparkStatePure (Try Computation)+prepareComputation cg = do+ session <- get+ let compt = do+ cg2 <- performGraphTransforms session cg+ _buildComputation session cg2+ when (isRight compt) _increaseCompCounter+ return compt++{-| Exposed for debugging++Inserts the source information into the graph.++Note: after that, the node IDs may be different. The names and the paths+will be kept though.+-}+insertSourceInfo :: ComputeGraph -> [(HdfsPath, DataInputStamp)] -> Try ComputeGraph+insertSourceInfo cg l = do+ let m = M.fromList l+ let g = computeGraphToGraph cg+ g2 <- graphMapVertices g (_updateVertex2 m)+ let cg2 = graphToComputeGraph g2+ return cg2++{-| A list of file sources that are being requested by the compute graph -}+inputSourcesRead :: ComputeGraph -> [HdfsPath]+inputSourcesRead cg =+ -- TODO: make unique elements+ mapMaybe (hdfsPath.nodeOp.vertexData) (toList (cdVertices cg))++-- Here are the steps being run+-- - node collection + cycle detection+-- - naming:+-- -> everything after that can be done with names, and on server+-- -> for convenience, the vertex ids will be still the hash ids+-- - verification of cache/uncache+-- - deconstruction of unions and aggregations+-- - caching swap+--+-- There is a lot more that could be done (merging the aggregations, etc.)+-- but it is outside the scope of this MVP.+-- TODO: should graph pruning be moved before naming?++{-| Builds the computation graph by expanding a single node until a transitive+closure is reached.++It performs the naming, node deduplication and cycle detection.++TODO(kps) use the caching information to have a correct fringe+-}+buildComputationGraph :: ComputeNode loc a -> Try ComputeGraph+buildComputationGraph ld = do+ cg <- tryEither $ buildCGraph (untyped ld)+ assignPathsUntyped cg++{-| Performs all the operations that are done on the compute graph:++- fullfilling autocache requests+- checking the cache/uncache pairs+- pruning of observed successful computations+- deconstructions of the unions (in the future)++This could all be done on the server side at this point.+-}+performGraphTransforms :: SparkSession -> ComputeGraph -> Try ComputeGraph+performGraphTransforms session cg = do+ -- Tie the nodes to ensure that the node IDs match the topology and+ -- content of the graph.+ -- TODO: make a special function for tying + pruning, it is easy to forget.+ let tiedCg = tieNodes cg+ let g = computeGraphToGraph tiedCg+ let conf = ssConf session+ let pruned = if confUseNodePrunning conf+ then pruneGraphDefault (ssNodeCache session) g+ else g+ -- Autocache + caching pass pass+ -- TODO: separate in a function+ let acg = fillAutoCache cachingType autocacheGen pruned+ g' <- tryEither acg+ failures <- tryEither $ checkCaching g' cachingType+ case failures of+ [] -> return (graphToComputeGraph g')+ _ -> tryError $ sformat ("Found some caching errors: "%sh) failures+ -- TODO: we could add an extra pruning pass here++_buildComputation :: SparkSession -> ComputeGraph -> Try Computation+_buildComputation session cg =+ let sid = ssId session+ cid = (ComputationID . pack . show . ssCommandCounter) session+ allNodes = vertexData <$> toList (cdVertices cg)+ terminalNodes = vertexData <$> toList (cdOutputs cg)+ terminalNodePaths = nodePath <$> terminalNodes+ terminalNodeIds = nodeId <$> terminalNodes+ -- TODO it is missing the first node here, hoping it is the first one.+ in case terminalNodePaths of+ [p] ->+ return $ Computation sid cid allNodes [p] p terminalNodeIds+ _ -> tryError $ sformat ("Programming error in _build1: cg="%sh) cg++_updateVertex :: M.Map HdfsPath DataInputStamp -> UntypedNode -> Try UntypedNode+_updateVertex m un =+ let no = nodeOp un in case hdfsPath no of+ Just p -> case M.lookup p m of+ Just dis -> updateSourceStamp no dis <&> updateNodeOp un+ -- TODO: this is for debugging, but it could be eventually relaxed.+ Nothing -> tryError $ "_updateVertex: Expected to find path " <> show' p+ Nothing -> pure un++_updateVertex2 ::+ M.Map HdfsPath DataInputStamp ->+ UntypedNode ->+ [(UntypedNode, StructureEdge)] ->+ Try UntypedNode+_updateVertex2 m un _ =+ _updateVertex m un++_increaseCompCounter :: SparkStatePure ()+_increaseCompCounter = get >>= \session ->+ let+ curr = ssCommandCounter session+ session2 = session { ssCommandCounter = curr + 1 }+ in put session2++-- Given an end point, gathers all the nodes reachable from there.+_gatherNodes :: LocalData a -> Try [UntypedNode]+_gatherNodes = tryEither . buildVertexList . untyped++-- Given a result, tries to build the corresponding object out of it+_extract1 :: FinalResult -> DataType -> Try Cell+_extract1 (Left nf) _ = tryError $ sformat ("got an error "%shown) nf+_extract1 (Right ncs) dt = tryEither $ jsonToCell dt (ncsData ncs)++-- Gets the relevant nodes for this computation from this spark session.+-- The computation is assumed to be correct and to contain all the nodes+-- already.+-- TODO: make it a total function+-- TODO: this is probably not needed anymore+getTargetNodes :: (HasCallStack) => Computation -> [UntypedLocalData]+getTargetNodes comp =+ let+ fun2 :: (HasCallStack) => UntypedNode -> UntypedLocalData+ fun2 n = case asLocalObservable <$> castLocality n of+ Right (Right x) -> x+ err -> failure $ sformat ("_getNodes:fun2: err="%shown%" n="%shown) err n+ finalNodeNames = cTerminalNodes comp+ dct = M.fromList $ (nodePath &&& id) <$> cNodes comp+ untyped2 = finalNodeNames <&> \n ->+ let err = failure $ sformat ("Could not find "%sh%" in "%sh) n dct+ in M.findWithDefault err n dct+ in fun2 <$> untyped2++{-| Retrieves all the observables from a computation.+-}+getObservables :: Computation -> [UntypedLocalData]+getObservables comp =+ let fun n = case asLocalObservable <$> castLocality n of+ Right (Right x) -> return x+ _ -> Nothing+ in catMaybes $ fun <$> cNodes comp++{-| Updates the cache, and returns the updates if there are any.++The updates are split into final results, and general update status (scheduled,+running, etc.)+-}+updateCache :: ComputationID -> [(NodeId, NodePath, DataType, PossibleNodeStatus)] -> SparkStatePure ([(NodeId, Try Cell)], [(NodePath, NodeCacheStatus)])+updateCache c l = do+ l' <- sequence $ _updateCache1 c <$> l+ return (catMaybes (fst <$> l'), catMaybes (snd <$> l'))++_updateCache1 :: ComputationID -> (NodeId, NodePath, DataType, PossibleNodeStatus) -> SparkStatePure (Maybe (NodeId, Try Cell), Maybe (NodePath, NodeCacheStatus))+_updateCache1 cid (nid, p, dt, status) =+ case status of+ (NodeFinishedSuccess (Just s) _) -> do+ updated <- _insertCacheUpdate cid nid p NodeCacheSuccess+ let res2 = _extract1 (pure s) dt+ return (Just (nid, res2), (p, ) <$> updated)+ (NodeFinishedFailure e) -> do+ updated <- _insertCacheUpdate cid nid p NodeCacheError+ let res2 = _extract1 (Left e) dt+ return (Just (nid, res2), (p, ) <$> updated)+ NodeRunning -> do+ updated <- _insertCacheUpdate cid nid p NodeCacheRunning+ return (Nothing, (p, ) <$> updated)+ _ -> return (Nothing, Nothing)++-- Returns true if the cache is updated+_insertCacheUpdate :: ComputationID -> NodeId -> NodePath -> NodeCacheStatus -> SparkStatePure (Maybe NodeCacheStatus)+_insertCacheUpdate cid nid p s = do+ session <- get+ let m = ssNodeCache session+ let currentStatus = nciStatus <$> HM.lookup nid m+ if currentStatus == Just s+ then return Nothing+ else do+ let v = NodeCacheInfo {+ nciStatus = s,+ nciComputation = cid,+ nciPath = p }+ let m' = HM.insert nid v m+ let session' = session { ssNodeCache = m' }+ put session'+ return $ Just s
+ src/Spark/Core/Internal/ContextStructures.hs view
@@ -0,0 +1,81 @@+{-# LANGUAGE OverloadedStrings #-}++module Spark.Core.Internal.ContextStructures(+ SparkSessionConf(..),+ SparkSession(..),+ SparkState,+ SparkStatePure,+ ComputeGraph,+ HdfsPath(..),+ NodeCacheInfo(..),+ NodeCacheStatus(..),+ SparkStateT,+ SparkStatePureT+) where++import Data.Text(Text)+import Control.Monad.State(StateT, State)+import Control.Monad.Logger(LoggingT)++import Spark.Core.Internal.Client(LocalSessionId)+import Spark.Core.Internal.ComputeDag(ComputeDag)+import Spark.Core.Internal.OpStructures(HdfsPath(..))+import Spark.Core.Internal.Pruning+import Spark.Core.Internal.DatasetStructures(UntypedNode, StructureEdge)++-- | The configuration of a remote spark session in Karps.+data SparkSessionConf = SparkSessionConf {+ -- | The URL of the end point.+ confEndPoint :: !Text,+ -- | The port used to configure the end point.+ confPort :: !Int,+ -- | (internal) the polling interval+ confPollingIntervalMillis :: !Int,+ -- | (optional) the requested name of the session.+ -- This name must obey a number of rules:+ -- - it must consist in alphanumerical and -,_: [a-zA-Z0-9\-_]+ -- - if it already exists on the server, it will be reconnected to+ --+ -- The default value is "" (a new random context name will be chosen).+ confRequestedSessionName :: !Text,+ {-| If enabled, attempts to prune the computation graph as much as possible.++ This option is useful in interactive sessions when long chains of computations+ are extracted. This forces the execution of only the missing parts.+ The algorithm is experimental, so disabling it is a safe option.++ Disabled by default.+ -}+ confUseNodePrunning :: !Bool+} deriving (Show)++-- | A session in Spark.+-- Encapsualates all the state needed to communicate with Spark+-- and to perfor some simple optimizations on the code.+data SparkSession = SparkSession {+ ssConf :: !SparkSessionConf,+ ssId :: !LocalSessionId,+ ssCommandCounter :: !Integer,+ ssNodeCache :: !NodeCache+} deriving (Show)++++-- | Represents the state of a session and accounts for the communication+-- with the server.+type SparkState a = SparkStateT IO a++-- More minimalistic state transforms when doing pure evaluation.+-- (internal type)+-- TODO: use the transformer+type SparkStatePure x = State SparkSession x++type SparkStatePureT m = StateT SparkSession m+type SparkStateT m = LoggingT (SparkStatePureT m)++{-| internal++A graph of computations. This graph is a direct acyclic graph. Each node is+associated to a global path.+-}+type ComputeGraph = ComputeDag UntypedNode StructureEdge
+ src/Spark/Core/Internal/DAGFunctions.hs view
@@ -0,0 +1,410 @@+{-# LANGUAGE OverloadedStrings #-}+{-# LANGUAGE ScopedTypeVariables #-}+{-# LANGUAGE FlexibleContexts #-}++{-| A set of utility functions to build and transform DAGs.++Because I could not find a public library for such transforms.++Most Karps manipulations are converted into graph manipulations.+-}+module Spark.Core.Internal.DAGFunctions(+ DagTry,+ FilterOp(..),+ -- Building+ buildGraph,+ buildVertexList,+ buildGraphFromList,+ -- Queries+ graphSinks,+ graphSources,+ -- Transforms+ graphMapVertices,+ graphMapVertices',+ vertexMap,+ graphFlatMapEdges,+ graphMapEdges,+ reverseGraph,+ verticesAndEdges,+ graphFilterVertices,+ pruneLexicographic+) where++import qualified Data.Set as S+import qualified Data.Map.Strict as M+import qualified Data.Vector as V+import Data.List(sortBy)+import Data.Maybe+import Data.Foldable(toList)+import Data.Text(Text)+import Control.Arrow((&&&))+import Control.Monad.Except+import Formatting+import Control.Monad.Identity++import Spark.Core.Internal.DAGStructures+import Spark.Core.Internal.Utilities++-- | Separate type of error to make it more general and easier+-- to test.+type DagTry a = Either Text a++{-| The different filter modes when pruning a graph.++Keep: keep the current node.+CutChildren: keep the current node, but do not consider the children.+Remove: remove the current node, do not consider the children.+-}+data FilterOp = Keep | Remove | CutChildren++{-| Starts from a vertex and expands the vertex to reach all the transitive+closure of the vertex.++Returns a list in lexicographic order of dependencies: the graph corresponding+to this list of elements has one sink (the start element) and potentially+multiple sources. The nodes are ordered so that all the parents are visited+before the node itself.+-}+buildVertexList :: (GraphVertexOperations v, Show v) => v -> DagTry [v]+buildVertexList x = buildVertexListBounded x []++{-| Builds the list of vertices, up to a boundary.+-}+buildVertexListBounded :: (GraphVertexOperations v, Show v) =>+ v -> [v] -> DagTry [v]+buildVertexListBounded x boundary =+ let+ boundaryIds = S.fromList $ vertexToId <$> boundary+ traversals = toList $ _buildList boundaryIds [x] M.empty+ lexico = _lexicographic vertexToId traversals in lexico++-- | Builds a graph by expanding a start vertex.+buildGraph :: forall v e. (GraphOperations v e, Show v) =>+ v -> DagTry (Graph v e)+buildGraph start = buildVertexList start <&> \vxData ->+ let vertices = [Vertex (vertexToId vx) vx | vx <- vxData]+ -- The edges and vertices are already in the right order, no need+ -- to do further checks+ f :: v -> (VertexId, V.Vector (VertexEdge e v))+ f x =+ let vid = vertexToId x+ g :: (e, v) -> VertexEdge e v+ g (ed, x') =+ let toId = vertexToId x'+ v' = Vertex toId x'+ e = Edge vid toId ed+ in VertexEdge v' e+ vedges = g <$> expandVertex x+ in (vid, V.fromList vedges)+ vxs = V.fromList vertices+ edges = f <$> vxData+ adj = M.fromList edges+ in Graph adj vxs++{-| Attempts to build a graph from a collection of vertices and edges.++This collection may be invalid (cycles, etc.) and the vertices need not+be in topological order.++All the vertices referred by edges must be present in the list of vertices.+-}+buildGraphFromList :: forall v e. (Show v) =>+ [Vertex v] -> [Edge e] -> DagTry (Graph v e)+buildGraphFromList vxs eds = do+ -- 1. Group the edges by start point+ -- 2. Find the lexicgraphic order (if possible)+ vxById <- _vertexById vxs+ -- The topological information+ let edTopo = myGroupBy $ (edgeFrom &&& edgeTo) <$> eds+ let vertexById :: VertexId -> DagTry (Vertex v)+ vertexById vid = case M.lookup vid vxById of+ Nothing -> throwError $ sformat ("buildGraphFromList: vertex id found in edge but not in vertices: "%sh) vid+ Just vx -> pure vx+ let f :: Vertex v -> DagTry (Vertex v, [Vertex v])+ f vx =+ let links = M.findWithDefault [] (vertexId vx) edTopo+ in sequence (vertexById <$> links) <&> \l -> (vx, l)+ verticesWithEnds <- sequence $ f <$> vxs+ let indexedVertices = zip [1..] verticesWithEnds <&> \(idx, (vx, l)) -> (idx, vx, l)+ -- The nodes in lexicographic order.+ lexico <- _lexicographic vertexId indexedVertices+ -- Build the edge map:+ -- vertexFromId -> vertexEdge+ let vertexEdge :: Edge e -> DagTry (VertexId, VertexEdge e v)+ vertexEdge e = do+ vxTo <- vertexById (edgeTo e)+ -- Used to confirm that the start vertex is here+ _ <- vertexById (edgeFrom e)+ return (edgeFrom e, VertexEdge vxTo e)+ vEdges <- sequence $ vertexEdge <$> eds+ let edgeMap = M.map V.fromList (myGroupBy vEdges)+ return $ Graph edgeMap (V.fromList lexico)++_vertexById :: (Show v) => [Vertex v] -> DagTry (M.Map VertexId (Vertex v))+_vertexById vxs =+ -- This is probably not the most pretty, but it works.+ let vxById = myGroupBy $ (vertexId &&& id) <$> vxs+ f (vid, [vx]) = pure (vid, vx)+ f (vid, l) = throwError $ sformat ("_VertexById: Multiple vertices with the same id: "%sh%" in "%sh) vid l+ in M.fromList <$> sequence (f <$> M.toList vxById)++-- This implementation is not very efficient and is probably a performance+-- bottleneck.+-- Int is the traversal order. It is just used to break the ties.+-- VertexId is the node id of the vertex.+_lexicographic :: (v -> VertexId) -> [(Int, v, [v])] -> DagTry [v]+_lexicographic _ [] = return []+_lexicographic f m =+ -- We use the traversal ordering to separate the ties.+ -- The first nodes traversed get priority.+ let fcmp (idx, _, []) (idx', _, []) = compare idx idx'+ fcmp (_, _, []) (_, _, _) = LT+ fcmp (_, _, _) (_, _, []) = GT+ fcmp (_, _, _) (_, _, _) = EQ -- This one does not matter+ in case sortBy fcmp m of+ [] -> throwError "_lexicographic: there is a cycle"+ ((_, v, _) : t) ->+ let currentId = f v+ removeCurrentId l = [v' | v' <- l, f v' /= currentId]+ m' = t <&> \(idx, v', l) -> (idx, v', removeCurrentId l)+ tl = _lexicographic f m'+ in (v :) <$> tl+++_buildList :: (Show v, GraphVertexOperations v) =>+ S.Set VertexId -> -- boundary ids, they will not be traversed+ [v] -> -- fringe ids+ M.Map VertexId (Int, v, [v]) -> -- all seen ids so far (the intermediate result)+ M.Map VertexId (Int, v, [v])+_buildList boundary fringe =+ _buildListGeneral boundary fringe expandVertexAsVertices++-- (internal)+-- Gathers the list of all the nodes connected through this graph+--+-- The expansion function in that case can be controlled.+--+-- The expansion is done in a DFS manner (the order of the node is unique).+_buildListGeneral :: (Show v, GraphVertexOperations v) =>+ S.Set VertexId -> -- boundary ids, they will not be traversed+ [v] -> -- fringe ids: the nodes that have been touched but not expanded.+ (v -> [v]) -> -- The expansion function. They will be the next nodes to expand.+ -- all seen ids so far (the intermediate result)+ -- along with the index of the node during the traversal, and the+ -- node itself.+ M.Map VertexId (Int, v, [v]) ->+ M.Map VertexId (Int, v, [v])+_buildListGeneral _ [] _ allSeen = allSeen+_buildListGeneral boundaryIds (x : t) expand allSeen =+ let vid = vertexToId x in+ if M.member vid allSeen || S.member vid boundaryIds then+ _buildListGeneral boundaryIds t expand allSeen+ else+ let nextVertices = expand x+ currIdx = M.size allSeen+ allSeen2 = M.insert vid (currIdx, x, nextVertices) allSeen+ filterFun y = not $ M.member (vertexToId y) allSeen2+ nextVertices2 = filter filterFun nextVertices+ in _buildListGeneral boundaryIds (nextVertices2 ++ t) expand allSeen2++{-| The sources of a DAG (nodes with no parent).+-}+graphSources :: Graph v e -> [Vertex v]+graphSources g =+ let hasParent = do+ vedges <- toList (gEdges g)+ edge <- toList vedges+ return . vertexId . veEndVertex $ edge+ hasPSet = S.fromList hasParent+ -- false iff the vertex has an incoming edge+ filt vx = not (S.member (vertexId vx) hasPSet)+ in filter filt (toList (gVertices g))++{-| The sinks of a graph (nodes with no descendant).+-}+graphSinks :: Graph v e -> [Vertex v]+graphSinks g =+ let f vx = V.null (M.findWithDefault V.empty (vertexId vx) (gEdges g))+ in filter f (toList (gVertices g))++-- | Flips the edges of this graph (it is also a DAG)+reverseGraph :: forall v e. Graph v e -> Graph v e+reverseGraph g =+ let+ vxMap = M.fromList ((vertexId &&& id) <$> toList (gVertices g))+ flipVEdge :: (VertexId, V.Vector (VertexEdge e v)) -> [(VertexId, VertexEdge e v)]+ flipVEdge (fromNid, vec) = case M.lookup fromNid vxMap of+ Nothing -> [] -- Should be a programming error+ Just endVx ->+ toList vec <&> \ve ->+ let ed = veEdge ve+ oldEndVx = veEndVertex ve+ oldEndVid = vertexId oldEndVx+ ed' = Edge {+ edgeFrom = oldEndVid,+ edgeTo = fromNid,+ edgeData = edgeData ed }+ in (oldEndVid, VertexEdge { veEdge = ed', veEndVertex = endVx })+ edges = myGroupBy $ concat $ flipVEdge <$> M.toList (gEdges g)+ in Graph (V.fromList <$> edges) (V.reverse (gVertices g))++-- | A generic transform over the graph that may account for potential failures+-- in the process.+graphMapVertices :: forall m v e v2. (HasCallStack, Show v2, Monad m) =>+ Graph v e -> -- The start graph+ (v -> [(v2,e)] -> m v2) -> -- The transform+ m (Graph v2 e)+graphMapVertices g f =+ let+ fun :: M.Map VertexId v2 -> [Vertex v] -> m [Vertex v2]+ fun _ [] = return []+ fun done (vx : t) =+ let+ vid = vertexId vx+ parents = V.toList $ fromMaybe V.empty $ M.lookup vid (gEdges g)+ parentEdges = veEdge <$> parents+ getPairs :: Edge e -> (v2, e)+ getPairs ed =+ let vidTo = edgeTo ed+ msg = sformat ("graphMapVertices: Could not locate "%shown%" in "%shown)vidTo done+ -- The edges are flowing from child -> parent so+ -- to == parent+ vert = fromMaybe (failure msg) (M.lookup vidTo done)+ in (vert, edgeData ed)+ parents2 = [getPairs ed | ed <- parentEdges]+ -- parents2 = [fromJust $ M.lookup vidFrom done | vidFrom <- parentVids]+ merge0 :: v2 -> m [Vertex v2]+ merge0 vx2Data =+ let done2 = M.insert vid vx2Data done+ vx2 = vx { vertexData = vx2Data }+ rest = fun done2 t in+ (vx2 : ) <$> rest+ in+ f (vertexData vx) parents2 >>= merge0+ in do+ verts2 <- fun M.empty (toList (gVertices g))+ let+ idxs2 = M.fromList [(vertexId vx2, vx2) | vx2 <- verts2]+ trans :: Vertex v -> Vertex v2+ trans vx = fromJust $ M.lookup (vertexId vx) idxs2+ conv :: VertexEdge e v -> VertexEdge e v2+ conv (VertexEdge vx1 e1) = VertexEdge (trans vx1) e1+ adj2 = M.map (conv <$>) (gEdges g)+ return Graph { gEdges = adj2, gVertices = V.fromList verts2 }++-- | (internal) Maps the edges+graphMapEdges :: Graph v e -> (e -> e') -> Graph v e'+graphMapEdges g f = graphFlatMapEdges g ((:[]) . f)++-- | (internal) Maps and the edges, and may create more or less.+graphFlatMapEdges :: Graph v e -> (e -> [e']) -> Graph v e'+graphFlatMapEdges g f = g { gEdges = edges } where+ fun (VertexEdge vx ed) =+ f (edgeData ed) <&> \ed' -> VertexEdge vx (ed { edgeData = ed' })+ edges = (V.fromList . concatMap fun) <$> gEdges g++-- | (internal) Maps the vertices.+graphMapVertices' :: (Show v, Show e, Show v') => (v -> v') -> Graph v e -> Graph v' e+graphMapVertices' f g =+ runIdentity (graphMapVertices g f') where+ f' v _ = return $ f v++{-| Given a graph, prunes out a subset of vertices.++All the corresponding edges and the unreachable chunks of the graph are removed.+-}+graphFilterVertices :: (Show v, Show e) =>+ (v -> FilterOp) -> Graph v e -> Graph v e+graphFilterVertices f g =+ -- Tag all the vertices that we are going to remove first.+ let f' v l = return $ _transFilter f v l+ g' = runIdentity (graphMapVertices g f')+ -- In a second step, directly remove all these elements from the graph.+ -- TODO: use more recent version of Vector.+ vxs = V.fromList $ mapMaybe _filt (V.toList (gVertices g'))+ keptIds = S.fromList $ V.toList (vertexId <$> vxs)+ eds = M.mapMaybeWithKey (_filtEdge keptIds) (gEdges g)+ -- We are guaranteed that the result is still a DAG.+ in Graph eds vxs+++-- | The map of vertices, by vertex id.+vertexMap :: Graph v e -> M.Map VertexId v+vertexMap g =+ M.fromList . toList $ gVertices g <&> (vertexId &&& vertexData)++-- (internal)+-- The vertices in lexicographic order, and the originating edges for these+-- vertices.+verticesAndEdges :: Graph v e -> [([(v, e)],v)]+verticesAndEdges g =+ toList (gVertices g) <&> \vx ->+ let n = vertexData vx+ l = V.toList $ M.findWithDefault V.empty (vertexId vx) (gEdges g)+ lres = [(vertexData vx', edgeData e') | (VertexEdge vx' e') <- l]+ in (lres, n)++{-| Given a list of elements with vertex/edge information and a start vertex,+builds the graph from all the reachable vertices in the list.++It returns the vertices in a DAG traversal order.++Note that this function is robust and silently drops the missing vertices.+-}+pruneLexicographic :: VertexId -> [(VertexId, [VertexId], a)] -> [a]+pruneLexicographic hvid l =+ let f (vid, l', a) = (vid, (l', a))+ allVertices = myGroupBy (f <$> l)+ allVertices' = M.map head allVertices+ in reverse $ _pruneLexicographic allVertices' S.empty [hvid]++-- Recursive traversal of the graph, dropping everything that looks suspiscious.+_pruneLexicographic ::+ M.Map VertexId ([VertexId], a) ->+ S.Set VertexId ->+ [VertexId] ->+ [a]+_pruneLexicographic _ _ [] = []+_pruneLexicographic vertices visited (hvid : t) =+ if S.member hvid visited+ then _pruneLexicographic vertices visited t+ else case M.lookup hvid vertices of+ Just (l, x) ->+ x : _pruneLexicographic vertices (S.insert hvid visited) (l ++ t)+ Nothing ->+ _pruneLexicographic vertices visited t++_transFilter :: (v -> FilterOp) -> v -> [(FilterVertex v, e)] -> FilterVertex v+_transFilter filt vx l =+ let f (KeepVertex _, _) = True+ f (DropChildren _, _) = False+ f (RemoveVertex _, _) = False+ -- If the current node is reachable:+ -- If the node has no child, we do not make checks on the parents.+ -- (it is considered to be reachable)+ reachableChildren = null l || or (f <$> l)+ in if reachableChildren+ then case filt vx of+ Keep -> KeepVertex vx+ CutChildren -> DropChildren vx+ Remove -> RemoveVertex vx+ -- The node is unreachable, just drop+ else RemoveVertex vx++_filt :: Vertex (FilterVertex v) -> Maybe (Vertex v)+_filt (Vertex vid (KeepVertex v)) = Just (Vertex vid v)+_filt (Vertex vid (DropChildren v)) = Just (Vertex vid v)+_filt (Vertex _ (RemoveVertex _)) = Nothing+++_filtEdge :: S.Set VertexId -> VertexId -> V.Vector (VertexEdge e v) -> Maybe (V.Vector (VertexEdge e v))+-- The start vertex has been pruned out.+_filtEdge s vid _ | not (S.member vid s) = Nothing+_filtEdge s _ v =+ let f ve = S.member (vertexId . veEndVertex $ ve) s+ v' = V.filter f v+ in if V.null v'+ then Nothing+ else Just v'++data FilterVertex v = KeepVertex !v | DropChildren !v | RemoveVertex !v deriving (Show)
+ src/Spark/Core/Internal/DAGStructures.hs view
@@ -0,0 +1,107 @@+{-# LANGUAGE MultiParamTypeClasses #-}+{-# LANGUAGE DeriveGeneric #-}+{-# LANGUAGE OverloadedStrings #-}++{-| Data structures to represent Directed Acyclic Graphs (DAGs).++-}+module Spark.Core.Internal.DAGStructures where++import qualified Data.Map.Strict as M+import qualified Data.Text as T+import Data.ByteString(ByteString)+import Data.Vector(Vector)+import Data.Foldable(toList)+import Data.Hashable(Hashable)+import GHC.Generics(Generic)+import Formatting++import Spark.Core.Internal.Utilities++-- | The unique ID of a vertex.+newtype VertexId = VertexId { unVertexId :: ByteString } deriving (Eq, Ord, Generic)+++-- | An edge in a graph, parametrized by some payload.+data Edge e = Edge {+ edgeFrom :: !VertexId,+ edgeTo :: !VertexId,+ edgeData :: !e+}++-- | A vertex in a graph, parametrized by some payload.+data Vertex v = Vertex {+ vertexId :: !VertexId,+ vertexData :: !v+}++{-| An edge, along with its end node.+-}+data VertexEdge e v = VertexEdge {+ veEndVertex :: !(Vertex v),+ veEdge :: !(Edge e) }++{-| The adjacency map of a graph.++The node Id corresponds to the start node, the pairs are the end node and+and the edge to reach to the node. There may be multiple edges leading to the+same node.+-}+type AdjacencyMap v e = M.Map VertexId (Vector (VertexEdge e v))++-- | The representation of a graph.+--+-- In all the project, it is considered as a DAG.+data Graph v e = Graph {+ gEdges :: !(AdjacencyMap v e),+ gVertices :: !(Vector (Vertex v))+}++-- | Graph operations on types that are supposed to+-- represent vertices.+class GraphVertexOperations v where+ vertexToId :: v -> VertexId+ expandVertexAsVertices :: v -> [v]++-- | Graph operations on types that are supposed to represent+-- edges.+class (GraphVertexOperations v) => GraphOperations v e where+ expandVertex :: v -> [(e,v)]++instance Functor Vertex where+ fmap f vx = vx { vertexData = f (vertexData vx) }++instance Functor Edge where+ fmap f ed = ed { edgeData = f (edgeData ed) }++instance (Show v) => Show (Vertex v) where+ show vx = "Vertex(vId=" ++ show (vertexId vx) ++ " v=" ++ show (vertexData vx) ++ ")"++instance (Show e) => Show (Edge e) where+ show ed = "Edge(from=" ++ show (edgeFrom ed) ++ " to=" ++ show (edgeTo ed) ++ " e=" ++ show (edgeData ed) ++ ")"++instance (Show v, Show e) => Show (VertexEdge e v) where+ show (VertexEdge v e) = "(" ++ show v ++ ", " ++ show e ++ ")"++instance (Show v, Show e) => Show (Graph v e) where+ show g =+ let vxs = toList $ gVertices g <&> \(Vertex vid x) ->+ sformat (sh%":"%sh) vid x+ vedges = foldMap toList (M.elems (gEdges g))+ edges = (veEdge <$> vedges) <&> \(Edge efrom eto x) ->+ sformat (sh%"->"%sh%"->"%sh) efrom x eto+ -- eds = (M.elems (gEdges g)) `foldMap` \v ->+ -- (toList v) <&>+ vxs' = T.intercalate "," vxs+ eds' = T.intercalate " " edges+ str = T.concat ["Graph{", vxs', ", ", eds', "}"]+ in T.unpack str++instance Hashable VertexId++instance Show VertexId where+ show (VertexId bs) = let s = show bs in+ if length s > 9 then+ (drop 1 . take 6) s ++ ".."+ else+ s
+ src/Spark/Core/Internal/DatasetFunctions.hs view
@@ -0,0 +1,582 @@+{-# LANGUAGE OverloadedStrings #-}+{-# LANGUAGE RankNTypes #-}+{-# LANGUAGE ScopedTypeVariables #-}+{-# LANGUAGE FlexibleInstances #-}+{-# LANGUAGE FlexibleContexts #-}+{-# OPTIONS_GHC -fno-warn-orphans #-}++module Spark.Core.Internal.DatasetFunctions(+ parents,+ untyped,+ untyped',+ logicalParents,+ logicalParents',+ depends,+ dataframe,+ asDF,+ asDS,+ asLocalObservable,+ asObservable,+ -- Standard functions+ identity,+ autocache,+ cache,+ uncache,+ union,+ -- Developer+ castLocality,+ emptyDataset,+ emptyLocalData,+ emptyNodeStandard,+ nodeId,+ nodeLogicalDependencies,+ nodeLogicalParents,+ nodeLocality,+ nodeName,+ nodePath,+ nodeOp,+ nodeParents,+ nodeType,+ untypedDataset,+ untypedLocalData,+ updateNode,+ updateNodeOp,+ broadcastPair,+ -- Developer conversions+ -- TODO: remove all that+ fun1ToOpTyped,+ fun2ToOpTyped,+ nodeOpToFun1,+ nodeOpToFun1Typed,+ nodeOpToFun1Untyped,+ nodeOpToFun2,+ nodeOpToFun2Typed,+ nodeOpToFun2Untyped,+ unsafeCastDataset,+ placeholder,+ castType,+ castType',+ -- Internal+ opnameCache,+ opnameUnpersist,+ opnameAutocache,++) where++import qualified Crypto.Hash.SHA256 as SHA+import qualified Data.Aeson as A+import qualified Data.Text as T+import qualified Data.Text.Format as TF+import qualified Data.Vector as V+import Data.Aeson((.=), toJSON)+import Data.Text.Encoding(decodeUtf8)+import Data.ByteString.Base16(encode)+import Data.Maybe(fromMaybe, listToMaybe)+import Data.Text.Lazy(toStrict)+import Data.String(IsString(fromString))+import Formatting++import Spark.Core.StructuresInternal+import Spark.Core.Try+import Spark.Core.Row+import Spark.Core.Internal.TypesStructures+import Spark.Core.Internal.DatasetStructures+import Spark.Core.Internal.OpStructures+import Spark.Core.Internal.OpFunctions+import Spark.Core.Internal.Utilities+import Spark.Core.Internal.RowUtils+import Spark.Core.Internal.TypesGenerics+import Spark.Core.Internal.TypesFunctions++-- | (developer) The operation performed by this node.+nodeOp :: ComputeNode loc a -> NodeOp+nodeOp = _cnOp++-- | The nodes this node depends on directly.+nodeParents :: ComputeNode loc a -> [UntypedNode]+nodeParents = V.toList . _cnParents++-- | (developer) Returns the logical parenst of a node.+nodeLogicalParents :: ComputeNode loc a -> Maybe [UntypedNode]+nodeLogicalParents = (V.toList <$>) . _cnLogicalParents++-- | Returns the logical dependencies of a node.+nodeLogicalDependencies :: ComputeNode loc a -> [UntypedNode]+nodeLogicalDependencies = V.toList . _cnLogicalDeps++-- | The name of a node.+-- TODO: should be a NodePath+nodeName :: ComputeNode loc a -> NodeName+nodeName node = fromMaybe (_defaultNodeName node) (_cnName node)++{-| The path of a node, as resolved.++This path includes information about the logical parents (after resolution).+-}+nodePath :: ComputeNode loc a -> NodePath+nodePath node =+ if V.null . unNodePath . _cnPath $ node+ then NodePath . V.singleton . nodeName $ node+ else _cnPath node++-- | The type of the node+-- TODO have nodeType' for dynamic types as well+nodeType :: ComputeNode loc a -> SQLType a+nodeType = SQLType . _cnType++{-| The identity function.++Returns a compute node with the same datatype and the same content as the+previous node. If the operation of the input has a side effect, this side+side effect is *not* reevaluated.++This operation is typically used when establishing an ordering between some+operations such as caching or side effects, along with `logicalDependencies`.+-}+identity :: ComputeNode loc a -> ComputeNode loc a+identity n = n2 `parents` [untyped n]+ where n2 = emptyNodeStandard (nodeLocality n) (nodeType n) name+ name = if _cnLocality n == Local+ then "org.spark.LocalIdentity"+ else "org.spark.Identity"++{-| Caches the dataset.++This function instructs Spark to cache a dataset with the default persistence+level in Spark (MEMORY_AND_DISK).++Note that the dataset will have to be evaluated first for the caching to take+effect, so it is usual to call `count` or other aggregrators to force+the caching to occur.+-}+cache :: Dataset a -> Dataset a+cache n = n2 `parents` [untyped n]+ where n2 = emptyNodeStandard (nodeLocality n) (nodeType n) opnameCache++-- (internal)+opnameCache :: T.Text+opnameCache = "org.spark.Cache"++{-| Uncaches the dataset.++This function instructs Spark to unmark the dataset as cached. The disk and the+memory used by Spark in the future.++Unlike Spark, Karps is stricter with the uncaching operation:+ - the argument of cache must be a cached dataset+ - once a dataset is uncached, its cached version cannot be used again (i.e. it+ must be recomputed).++Karps performs escape analysis and will refuse to run programs with caching+issues.+-}+uncache :: ComputeNode loc a -> ComputeNode loc a+uncache n = n2 `parents` [untyped n]+ where n2 = emptyNodeStandard (nodeLocality n) (nodeType n) opnameUnpersist++-- (internal)+opnameUnpersist :: T.Text+opnameUnpersist = "org.spark.Unpersist"++{-| Automatically caches the dataset on a need basis, and performs deallocation+when the dataset is not required.++This function marks a dataset as eligible for the default caching level in+Spark. The current implementation performs caching only if it can be established+that the dataset is going to be involved in more than one shuffling or+aggregation operation.++If the dataset has no observable child, no uncaching operation is added: the+autocache operation is equivalent to unconditional caching.+-}+autocache :: Dataset a -> Dataset a+autocache n = n2 `parents` [untyped n]+ where n2 = emptyNodeStandard (nodeLocality n) (nodeType n) opnameAutocache++opnameAutocache :: T.Text+opnameAutocache = "org.spark.Autocache"++{-| Returns the union of two datasets.++In the context of streaming and differentiation, this union is biased towards+the left: the left argument expresses the stream and the right element expresses+the increment.+-}+union :: Dataset a -> Dataset a -> Dataset a+union n1 n2 = n `parents` [untyped n1, untyped n2]+ where n = emptyNodeStandard (nodeLocality n1) (nodeType n1) _opnameUnion++_opnameUnion :: T.Text+_opnameUnion = "org.spark.Union"++-- | Converts to a dataframe and drops the type info.+-- This always works.+asDF :: ComputeNode LocDistributed a -> DataFrame+asDF = pure . _unsafeCastNode++-- | Attempts to convert a dataframe into a (typed) dataset.+--+-- This will fail if the dataframe itself is a failure, of if the casting+-- operation is not correct.+-- This operation assumes that both field names and types are correct.+asDS :: forall a. (SQLTypeable a) => DataFrame -> Try (Dataset a)+asDS = _asTyped+++-- | Converts a local node to a local frame.+-- This always works.+asLocalObservable :: ComputeNode LocLocal a -> LocalFrame+asLocalObservable = pure . _unsafeCastNode++asObservable :: forall a. (SQLTypeable a) => LocalFrame -> Try (LocalData a)+asObservable = _asTyped++-- | Converts any node to an untyped node+untyped :: ComputeNode loc a -> UntypedNode+untyped = _unsafeCastNode++untyped' :: Try (ComputeNode loc a) -> UntypedNode'+untyped' = fmap untyped+++untypedDataset :: ComputeNode LocDistributed a -> UntypedDataset+untypedDataset = _unsafeCastNode++{-| Removes type informatino from an observable. -}+untypedLocalData :: ComputeNode LocLocal a -> UntypedLocalData+untypedLocalData = _unsafeCastNode++{-| Adds parents to the node.+It is assumed the parents are the unique set of nodes required+by the operation defined in this node.+If you want to set parents for the sake of organizing computation+use logicalParents.+If you want to add some timing dependencies between nodes,+use depends.+-}+parents :: ComputeNode loc a -> [UntypedNode] -> ComputeNode loc a+parents node l = updateNode node $ \n ->+ n { _cnParents = V.fromList l V.++ _cnParents n }++{-| Establishes a naming convention on this node: the path of this node will be+determined as if the parents of this node were the list provided (and without+any effect from the direct parents of this node).++For this to work, the logical parents should split the nodes between internal+nodes, logical parents, and the rest. In other words, for any ancestor of this node,+and for any valid path to reach this ancestor, this path should include at least one+node from the logical dependencies.++This set can be a super set of the actual logical parents.++The check is lazy (done during the analysis phase). An error (if any) will+only be reported during analysis.+-}+logicalParents :: ComputeNode loc a -> [UntypedNode] -> ComputeNode loc a+logicalParents node l = updateNode node $ \n ->+ n { _cnLogicalParents = pure . V.fromList $ l }++logicalParents' :: Try (ComputeNode loc a) -> [UntypedNode'] -> Try (ComputeNode loc a)+logicalParents' n' l' = do+ n <- n'+ l <- sequence l'+ return (logicalParents n l)++{-| Sets the logical dependencies on this node.++All the nodes given will be guaranteed to be executed before the current node.++If there are any failures, this node will also be treated as a failure (even+if the parents are all successes).+-}+depends :: ComputeNode loc a -> [UntypedNode] -> ComputeNode loc a+depends node l = updateNode node $ \n ->+ n { _cnLogicalDeps = V.fromList l }+++-- (internal)+-- Tries to update the locality of a node. This is a checked cast.+-- TODO: remove, it is only used to cast to local frame+castLocality :: forall a loc loc'. (CheckedLocalityCast loc') =>+ ComputeNode loc a -> Try (ComputeNode loc' a)+castLocality node =+ let+ loc2 = _cnLocality node+ locs = unTypedLocality <$> (_validLocalityValues :: [TypedLocality loc'])+ in if locs == [loc2] then+ pure $ node { _cnLocality = loc2 }+ else+ tryError $ sformat ("Wrong locality :"%shown%", expected: "%shown) loc2 locs++-- (internal)+-- The id of a node. If it is not set in the node, it will be+-- computed from scratch.+-- This is a potentially long operation.+nodeId :: ComputeNode loc a -> NodeId+nodeId = _cnNodeId++-- (internal)+-- This operation should always be used to make sure that the+-- various caches inside the compute node are maintained.+updateNode :: ComputeNode loc a -> (ComputeNode loc a -> ComputeNode loc' b) -> ComputeNode loc' b+updateNode ds f = ds2 { _cnNodeId = id2 } where+ ds2 = f ds+ id2 = _nodeId ds2+++updateNodeOp :: ComputeNode loc a -> NodeOp -> ComputeNode loc a+updateNodeOp n no = updateNode n (\n' -> n' { _cnOp = no })++-- (internal)+-- The locality of the node+nodeLocality :: ComputeNode loc a -> TypedLocality loc+nodeLocality = TypedLocality . _cnLocality++-- (internal)+emptyDataset :: NodeOp -> SQLType a -> Dataset a+emptyDataset = _emptyNode++-- (internal)+emptyLocalData :: NodeOp -> SQLType a -> LocalData a+emptyLocalData = _emptyNode++{-| Creates a dataframe from a list of cells and a datatype.++Wil fail if the content of the cells is not compatible with the+data type.+-}+dataframe :: DataType -> [Cell] -> DataFrame+dataframe dt cells' = do+ validCells <- tryEither $ sequence (checkCell dt <$> cells')+ let jData = V.fromList (toJSON <$> validCells)+ let op = NodeDistributedLit dt jData+ return $ _emptyNode op (SQLType dt)+++-- *********** function / object conversions *******++-- | (internal)+placeholderTyped :: forall a loc. (IsLocality loc) =>+ SQLType a -> ComputeNode loc a+placeholderTyped tp = _unsafeCastNode n where+ n = placeholder (unSQLType tp) :: ComputeNode loc Cell++placeholder :: forall loc. (IsLocality loc) => DataType -> ComputeNode loc Cell+placeholder tp =+ let+ t = SQLType tp+ so = makeOperator "org.spark.Placeholder" t+ (TypedLocality l) = _getTypedLocality :: TypedLocality loc+ op = case l of+ Local -> NodeLocalOp so+ Distributed -> NodeDistributedOp so+ in _emptyNode op t++-- | (internal) conversion+fun1ToOpTyped :: forall a loc a' loc'. (IsLocality loc) =>+ SQLType a -> (ComputeNode loc a -> ComputeNode loc' a') -> NodeOp+fun1ToOpTyped sqlt f = nodeOp $ f (placeholderTyped sqlt)++-- | (internal) conversion+fun2ToOpTyped :: forall a1 a2 a loc1 loc2 loc. (IsLocality loc1, IsLocality loc2) =>+ SQLType a1 -> SQLType a2 -> (ComputeNode loc1 a1 -> ComputeNode loc2 a2 -> ComputeNode loc a) -> NodeOp+fun2ToOpTyped sqlt1 sqlt2 f = nodeOp $ f (placeholderTyped sqlt1) (placeholderTyped sqlt2)++-- | (internal) conversion+nodeOpToFun1 :: forall a1 a2 loc1 loc2. (SQLTypeable a2, IsLocality loc2) =>+ NodeOp -> ComputeNode loc1 a1 -> ComputeNode loc2 a2+nodeOpToFun1 = nodeOpToFun1Typed (buildType :: SQLType a2)++-- | (internal) conversion+nodeOpToFun1Typed :: forall a1 a2 loc1 loc2. (IsLocality loc2) =>+ SQLType a2 -> NodeOp -> ComputeNode loc1 a1 -> ComputeNode loc2 a2+nodeOpToFun1Typed sqlt no node =+ let n2 = _emptyNode no sqlt :: ComputeNode loc2 a2+ in n2 `parents` [untyped node]++-- | (internal) conversion+nodeOpToFun1Untyped :: forall loc1 loc2. (IsLocality loc2) =>+ DataType -> NodeOp -> ComputeNode loc1 Cell -> ComputeNode loc2 Cell+nodeOpToFun1Untyped dt no node =+ let n2 = _emptyNode no (SQLType dt) :: ComputeNode loc2 Cell+ in n2 `parents` [untyped node]++-- | (internal) conversion+nodeOpToFun2 :: forall a a1 a2 loc loc1 loc2. (SQLTypeable a, IsLocality loc) =>+ NodeOp -> ComputeNode loc1 a1 -> ComputeNode loc2 a2 -> ComputeNode loc a+nodeOpToFun2 = nodeOpToFun2Typed (buildType :: SQLType a)++-- | (internal) conversion+nodeOpToFun2Typed :: forall a a1 a2 loc loc1 loc2. (IsLocality loc) =>+ SQLType a -> NodeOp -> ComputeNode loc1 a1 -> ComputeNode loc2 a2 -> ComputeNode loc a+nodeOpToFun2Typed sqlt no node1 node2 =+ let n2 = _emptyNode no sqlt :: ComputeNode loc a+ in n2 `parents` [untyped node1, untyped node2]++-- | (internal) conversion+nodeOpToFun2Untyped :: forall loc1 loc2 loc3. (IsLocality loc3) =>+ DataType -> NodeOp -> ComputeNode loc1 Cell -> ComputeNode loc2 Cell -> ComputeNode loc3 Cell+nodeOpToFun2Untyped dt no node1 node2 =+ let n2 = _emptyNode no (SQLType dt) :: ComputeNode loc3 Cell+ in n2 `parents` [untyped node1, untyped node2]+++{-| Low-level operator that takes an observable and propagates it along the+content of an existing dataset.++Users are advised to use the Column-based `broadcast` function instead.+-}+broadcastPair :: Dataset a -> LocalData b -> Dataset (a, b)+broadcastPair ds ld = n `parents` [untyped ds, untyped ld]+ where n = emptyNodeStandard (nodeLocality ds) sqlt name+ sqlt = tupleType (nodeType ds) (nodeType ld)+ name = "org.spark.BroadcastPair"++-- ******* INSTANCES *********++-- Put here because it depends on some private functions.+instance forall loc a. Show (ComputeNode loc a) where+ show ld = let+ txt = fromString "{}@{}{}{}" :: TF.Format+ loc :: T.Text+ loc = case nodeLocality ld of+ TypedLocality Local -> "!"+ TypedLocality Distributed -> ":"+ np = prettyNodePath . nodePath $ ld+ no = prettyShowOp . nodeOp $ ld+ fields = T.pack . show . nodeType $ ld in+ T.unpack $ toStrict $ TF.format txt (np, no, loc, fields)++instance forall loc a. A.ToJSON (ComputeNode loc a) where+ toJSON node = A.object [+ "locality" .= nodeLocality node,+ "path" .= nodePath node,+ "op" .= (simpleShowOp . nodeOp $ node),+ "extra" .= (extraNodeOpData . nodeOp $ node),+ "parents" .= (nodePath <$> nodeParents node),+ "logicalDependencies" .= (nodePath <$> nodeLogicalDependencies node),+ "_type" .= (unSQLType . nodeType) node]++instance forall loc. A.ToJSON (TypedLocality loc) where+ toJSON (TypedLocality Local) = A.String "local"+ toJSON (TypedLocality Distributed) = A.String "distributed"++unsafeCastDataset :: ComputeNode LocDistributed a -> ComputeNode LocDistributed b+unsafeCastDataset ds = ds { _cnType = _cnType ds }++-- TODO: figure out the story around haskell types vs datatypes+-- Should we have equivalence classes for haskell, so that a tuple has the+-- same type as a structure?+-- Probably not, it breaks the correspondence.+-- Probably, it makes the metadata story easier.+castType :: SQLType a -> ComputeNode loc b -> Try (ComputeNode loc a)+castType sqlt n = do+ let dt = unSQLType sqlt+ let dt' = unSQLType (nodeType n)+ if dt `compatibleTypes` dt'+ then let n' = updateNode n (\node -> node { _cnType = dt }) in+ pure (_unsafeCastNode n')+ else tryError $ sformat ("castType: Casting error: dataframe has type "%sh%" incompatible with type "%sh) dt' dt++castType' :: SQLType a -> Try (ComputeNode loc Cell) -> Try (ComputeNode loc a)+castType' sqlt df = df >>= castType sqlt++_asTyped :: forall loc a. (SQLTypeable a) => Try (ComputeNode loc Cell) -> Try (ComputeNode loc a)+_asTyped = castType' (buildType :: SQLType a)++-- Performs an unsafe type recast.+-- This is useful for internal code that knows whether+-- this operation is legal or not through some other means.+-- This may still throw an error if the cast is illegal.+_unsafeCastNode :: ComputeNode loc1 a -> ComputeNode loc2 b+_unsafeCastNode x = x {+ _cnType = _cnType x,+ _cnLocality = _cnLocality x+ }++_unsafeCastNodeTyped :: TypedLocality loc2 -> ComputeNode loc1 a -> ComputeNode loc2 b+_unsafeCastNodeTyped l x = x {+ _cnType = _cnType x,+ _cnLocality = unTypedLocality l+ }++--+_unsafeCastLoc :: CheckedLocalityCast loc' =>+ TypedLocality loc -> TypedLocality loc'+_unsafeCastLoc (TypedLocality Local) =+ checkLocalityValidity (TypedLocality Local)+_unsafeCastLoc (TypedLocality Distributed) =+ checkLocalityValidity (TypedLocality Distributed)+++-- This should be a programming error+checkLocalityValidity :: forall loc. (HasCallStack, CheckedLocalityCast loc) =>+ TypedLocality loc -> TypedLocality loc+checkLocalityValidity x =+ if x `notElem` _validLocalityValues+ then+ let msg = sformat ("CheckedLocalityCast: element "%shown%" not in the list of accepted values: "%shown)+ x (_validLocalityValues :: [TypedLocality loc])+ in failure msg x+ else x+++-- Computes the ID of a node.+-- Since this is a complex operation, it should be cached by each node.+_nodeId :: ComputeNode loc a -> NodeId+_nodeId node =+ let c1 = SHA.init+ f2 = unNodeId . nodeId+ c2 = hashUpdateNodeOp c1 (nodeOp node)+ c3 = SHA.updates c2 $ f2 <$> nodeParents node+ c4 = SHA.updates c3 $ f2 <$> nodeLogicalDependencies node+ -- c6 = SHA.update c4 $ (BS.concat . LBS.toChunks) b+ in+ -- Using base16 encoding to make sure it is readable.+ -- Not sure if it is a good idea in general.+ (NodeId . encode . SHA.finalize) c4++_defaultNodeName :: ComputeNode loc a -> NodeName+_defaultNodeName node =+ let opName = (prettyShowOp . nodeOp) node+ namePieces = T.splitOn (T.pack ".") opName+ lastOpt = (listToMaybe . reverse) namePieces+ l = fromMaybe (T.pack "???") lastOpt+ idbs = nodeId node+ idt = (T.take 6 . decodeUtf8 . unNodeId) idbs+ n = T.concat [T.toLower l, T.pack "_", idt]+ in NodeName n++-- Create a new empty node. Also performs a locality check to+-- make sure the info being provided is correct.+_emptyNode :: forall loc a. (IsLocality loc) =>+ NodeOp -> SQLType a -> ComputeNode loc a+_emptyNode op sqlt = _emptyNodeTyped (_getTypedLocality :: TypedLocality loc) sqlt op++_emptyNodeTyped :: forall loc a.+ TypedLocality loc -> SQLType a -> NodeOp -> ComputeNode loc a+_emptyNodeTyped tloc (SQLType dt) op = updateNode (_unsafeCastNodeTyped tloc ds) id where+ ds :: ComputeNode loc a+ ds = ComputeNode {+ _cnName = Nothing,+ _cnOp = op,+ _cnType = dt,+ _cnParents = V.empty,+ _cnLogicalParents = Nothing,+ _cnLogicalDeps = V.empty,+ _cnLocality = unTypedLocality tloc,+ _cnNodeId = error "_emptyNode: _cnNodeId",+ _cnPath = NodePath V.empty+ }++emptyNodeStandard :: forall loc a.+ TypedLocality loc -> SQLType a -> T.Text -> ComputeNode loc a+emptyNodeStandard tloc sqlt name = _emptyNodeTyped tloc sqlt op where+ so = StandardOperator {+ soName = name,+ soOutputType = unSQLType sqlt,+ soExtra = A.Null+ }+ op = if unTypedLocality tloc == Local+ then NodeLocalOp so+ else NodeDistributedOp so
+ src/Spark/Core/Internal/DatasetStructures.hs view
@@ -0,0 +1,191 @@+{-# LANGUAGE MultiParamTypeClasses #-}+{-# LANGUAGE RankNTypes #-}+{-# LANGUAGE TypeSynonymInstances #-}+{-# LANGUAGE FlexibleInstances #-}+{-# LANGUAGE TypeFamilies #-}++module Spark.Core.Internal.DatasetStructures where++import Data.Vector(Vector)++import Spark.Core.StructuresInternal+import Spark.Core.Try+import Spark.Core.Row+import Spark.Core.Internal.OpStructures+import Spark.Core.Internal.TypesStructures++{-| (internal) The main data structure that represents a data node in the+computation graph.++This data structure forms the backbone of computation graphs expressed+with spark operations.++loc is a typed locality tag.+a is the type of the data, as seen by the Haskell compiler. If erased, it+will be a Cell type.+-}+-- TODO: separate the topology info from the node info. It will help when+-- building the graphs.+data ComputeNode loc a = ComputeNode {+ -- | The id of the node.+ --+ -- Non strict because it may be expensive.+ _cnNodeId :: NodeId,+ -- The following fields are used to build a unique ID to+ -- a compute node:++ -- | The operation associated to this node.+ _cnOp :: !NodeOp,+ -- | The type of the node+ _cnType :: !DataType,+ -- | The direct parents of the node. The order of the parents is important+ -- for the semantics of the operation.+ _cnParents :: !(Vector UntypedNode),+ -- | A set of extra dependencies that can be added to force an order between+ -- the nodes.+ --+ -- The order is not important, they are sorted by ID.+ --+ -- TODO(kps) add this one to the id+ _cnLogicalDeps :: !(Vector UntypedNode),+ -- | The locality of this node.+ --+ -- TODO(kps) add this one to the id+ _cnLocality :: !Locality,+ -- Attributes that are not included in the id+ -- These attributes are mostly for the user to relate to the nodes.+ -- They are not necessary for the computation.+ --+ -- | The name+ _cnName :: !(Maybe NodeName),+ -- | A set of nodes considered as the logical input for this node.+ -- This has no influence on the calculation of the id and is used+ -- for organization purposes only.+ _cnLogicalParents :: !(Maybe (Vector UntypedNode)),+ -- | The path of this oned in a computation flow.+ --+ -- This path includes the node name.+ -- Not strict because it may be expensive to compute.+ -- By default it only contains the name of the node (i.e. the node is+ -- attached to the root)+ _cnPath :: NodePath+} deriving (Eq)++-- (internal) Phantom type tags for the locality+data TypedLocality loc = TypedLocality { unTypedLocality :: !Locality } deriving (Eq, Show)+data LocLocal+data LocDistributed+data LocUnknown++-- (developer) The type for which we drop all the information expressed in+-- types.+--+-- This is useful to express parent dependencies (pending a more type-safe+-- interface)+type UntypedNode = ComputeNode LocUnknown Cell++-- (internal) A dataset for which we have dropped type information.+-- Used internally by columns.+type UntypedDataset = Dataset Cell++type UntypedLocalData = LocalData Cell++{-| A typed collection of distributed data.++Most operations on datasets are type-checked by the Haskell+compiler: the type tag associated to this dataset is guaranteed+to be convertible to a proper Haskell type. In particular, building+a Dataset of dynamic cells is guaranteed to never happen.++If you want to do untyped operations and gain+some flexibility, consider using UDataFrames instead.++Computations with Datasets and observables are generally checked for+correctness using the type system of Haskell.+-}+type Dataset a = ComputeNode LocDistributed a++{-|+A unit of data that can be accessed by the user.++This is a typed unit of data. The type is guaranteed to be a proper+type accessible by the Haskell compiler (instead of simply a Cell+type, which represents types only accessible at runtime).++TODO(kps) rename to Observable+-}+type LocalData a = ComputeNode LocLocal a+++{-|+The dataframe type. Any dataset can be converted to a dataframe.++For the Spark users: this is different than the definition of the+dataframe in Spark, which is a dataset of rows. Because the support+for single columns is more akward in the case of rows, it is more+natural to generalize datasets to contain cells.+When communicating with Spark, though, single cells are wrapped+into rows with single field, as Spark does.+-}+type DataFrame = Try UntypedDataset++{-| Observable, whose type can only be infered at runtime and+that can fail to be computed at runtime.++Any observable can be converted to an untyped+observable.++Untyped observables are more flexible and can be combined in+arbitrary manner, but they will fail during the validation of+the Spark computation graph.++TODO(kps) rename to DynObservable+-}+type LocalFrame = Try UntypedLocalData++type UntypedNode' = Try UntypedNode++{-| The different paths of edges in the compute DAG of nodes, at the+start of computations.++ - scope edges specify the scope of a node for naming. They are not included in+ the id.++-}+data NodeEdge = ScopeEdge | DataStructureEdge StructureEdge deriving (Show, Eq)++{-| The edges in a compute DAG, after name resolution (which is where most of+the checks and computations are being done)++- parent edges are the direct parents of a node, the only ones required for+ defining computations. They are included in the id.+- logical edges define logical dependencies between nodes to force a specific+ ordering of the nodes. They are included in the id.+-}+data StructureEdge = ParentEdge | LogicalEdge deriving (Show, Eq)+++class CheckedLocalityCast loc where+ _validLocalityValues :: [TypedLocality loc]++-- Class to retrieve the locality associated to a type.+-- Is it better to use type classes?+class (CheckedLocalityCast loc) => IsLocality loc where+ _getTypedLocality :: TypedLocality loc++instance CheckedLocalityCast LocLocal where+ _validLocalityValues = [TypedLocality Local]++instance CheckedLocalityCast LocDistributed where+ _validLocalityValues = [TypedLocality Distributed]++-- LocLocal is a locality associated to Local+instance IsLocality LocLocal where+ _getTypedLocality = TypedLocality Local++-- LocDistributed is a locality associated to Distributed+instance IsLocality LocDistributed where+ _getTypedLocality = TypedLocality Distributed++instance CheckedLocalityCast LocUnknown where+ _validLocalityValues = [TypedLocality Distributed, TypedLocality Local]
+ src/Spark/Core/Internal/FunctionsInternals.hs view
@@ -0,0 +1,387 @@+{-# LANGUAGE OverloadedStrings #-}+{-# LANGUAGE FlexibleInstances #-}+{-# LANGUAGE FlexibleContexts #-}+{-# LANGUAGE RankNTypes #-}+{-# LANGUAGE MultiParamTypeClasses #-}+{-# LANGUAGE FunctionalDependencies #-}+{-# LANGUAGE UndecidableInstances #-}+{-# LANGUAGE ScopedTypeVariables #-}+-- A number of utilities related to data sets and dataframes.++module Spark.Core.Internal.FunctionsInternals(+ DynColPackable,+ StaticColPackable2,+ NameTuple(..),+ TupleEquivalence(..),+ asCol,+ asCol',+ pack1,+ pack,+ pack',+ struct',+ struct,+ -- Developer tools+ checkOrigin,+ projectColFunction,+ projectColFunction',+ projectColFunction2',+ colOpNoBroadcast+) where++import Control.Arrow+import Data.Aeson(toJSON)+import qualified Data.Vector as V+import qualified Data.Map.Strict as M+import qualified Data.List.NonEmpty as N+import qualified Data.Text as T+import Formatting++import Spark.Core.Internal.ColumnStructures+import Spark.Core.Internal.ColumnFunctions+import Spark.Core.Internal.DatasetFunctions+import Spark.Core.Internal.DatasetStructures+import Spark.Core.Internal.Utilities+import Spark.Core.Internal.TypesFunctions+import Spark.Core.Internal.LocalDataFunctions+import Spark.Core.Internal.TypesStructures+import Spark.Core.Internal.Projections+import Spark.Core.Internal.OpStructures+import Spark.Core.Internal.TypesGenerics(SQLTypeable, buildType)+import Spark.Core.StructuresInternal+import Spark.Core.Try++{-| The class of pairs of types that express the fact that some type a can+be converted to a dataset of type b.++This class is only inhabited by some internal types: lists, tuples, etc.+-}+class DynColPackable a where+ -- Returns (possibly) some form of the type a packed into a single column.+ -- This implementation must make sure that the final column is either a+ -- failure or is well-formed (no name duplicates, etc.)+ _packAsColumn :: a -> DynColumn++{-| The class of pairs of types that express the fact that some type a can+be converted to a dataset of type b.++This class is meant to be extended by users to create converters associated+to their data types.+-}+class StaticColPackable2 ref a b | a -> ref where+ _staticPackAsColumn2 :: a -> Column ref b++data NameTuple to = NameTuple [String]++{-| A class that expresses the fact that a certain type (that is well-formed)+is equivalent to a tuple of points.++Useful for auto conversions between tuples of columns and data structures.+-}+class TupleEquivalence to tup | to -> tup where+ tupleFieldNames :: NameTuple to++-- Here is the basic algorithm:+-- - datasets can only contain rows of things+-- - columns and observables contain cells (which may be empty)+-- - a strict struct cell is equivalent to a row+-- - a non-strict or non-struct cell is equivalent to a row with a single item+-- - as a consequence, there is no "row with a unique field". This is equivalent+-- to the element inside the field++-- Invariants to respect in terms of types (not in terms of values)+-- untypedCol . asCol == asCol'+-- pack1 . asCol == asCol . pack1+-- for single columns, pack = Right . pack1++-- The typed function+-- This only works for inner types that are known to the Haskell type system+-- fun :: (SQLTypeable a, HasCallStack) => Column a -> Column a -> Column a+-- fun = undefined++-- The untyped equivalent+-- Each of the inputs can be either a column or a try, and the final outcome is always a try+-- When both types are known to the type system, the 2 calls are equivalent+-- fun' :: (ColumnLike a1, ColumnLike a2, HasCallStack) => a1 -> a2 -> Try DynColumn+-- fun' = undefined++-- | Represents a dataframe as a single column.+asCol :: Dataset a -> Column a a+asCol ds =+ -- Simply recast the dataset as a column.+ -- The empty path indicates that we are wrapping the whole thing.+ iEmptyCol ds (unsafeCastType $ nodeType ds) (FieldPath V.empty)++asCol' :: DataFrame -> DynColumn+asCol' = ((iUntypedColData . asCol) <$>)++-- | Packs a single column into a dataframe.+pack1 :: Column ref a -> Dataset a+pack1 = _pack1++{-| Packs a number of columns into a single dataframe.++This operation is checked for same origin and no duplication of columns.++This function accepts columns, list of columns and tuples of columns (both+typed and untyped).+-}+pack' :: (DynColPackable a) => a -> DataFrame+-- Pack the columns and check that they have the same origin.+pack' z = pack1 <$> _packAsColumn z++{-| Packs a number of columns with the same references into a single dataset.++The type of the dataset must be provided in order to have proper type inference.++TODO: example.+-}+pack :: forall ref a b. (StaticColPackable2 ref a b) => a -> Dataset b+pack z =+ let c = _staticPackAsColumn2 z :: ColumnData ref b+ in pack1 c++{-| Packs a number of columns into a single column (the struct construct).++Columns must have different names, or an error is returned.+-}+struct' :: [DynColumn] -> DynColumn+struct' cols = do+ l <- sequence cols+ let fields = (colFieldName &&& id) <$> l+ _buildStruct fields++{-| Packs a number of columns into a single structure, given a return type.++The field names of the columns are discarded, and replaced by the field names+of the structure.+-}+struct :: forall ref a b. (StaticColPackable2 ref a b) => a -> Column ref b+struct = _staticPackAsColumn2+++checkOrigin :: [DynColumn] -> Try [UntypedColumnData]+checkOrigin x = _checkOrigin =<< sequence x++{-| Takes a typed function that operates on columns and projects this function+onto a similar operation for type observables.++This function is not very smart and may throw an error for complex cases such+as broadcasting, joins, etc.+-}+-- TODO: we do not need technically the typeable constraint.+-- It is an additional check.+projectColFunction :: forall x y.+ (HasCallStack, SQLTypeable y, SQLTypeable x) =>+ (forall ref. Column ref x -> Column ref y) -> LocalData x -> LocalData y+projectColFunction f o =+ let o' = untypedLocalData o+ sqltx = buildType :: SQLType x+ sqlty = buildType :: SQLType y+ f' :: UntypedColumnData -> Try UntypedColumnData+ f' x = dropColType . f <$> castTypeCol sqltx x+ o2 = projectColFunctionUntyped (f' =<<) o'+ o3 = castType sqlty =<< o2+ in forceRight o3++projectColFunctionUntyped ::+ (DynColumn -> DynColumn) -> UntypedLocalData -> LocalFrame+projectColFunctionUntyped f obs = do+ -- Create a placeholder dataset and a corresponding column.+ let dt = unSQLType (nodeType obs)+ -- Pass them to the function.+ let no = NodeDistributedLit dt V.empty+ let ds = emptyDataset no (SQLType dt)+ let c = asCol ds+ colRes <- f (pure (dropColType c))+ let dtOut = unSQLType $ colType colRes+ -- This will fail if there is a broadcast.+ co <- _replaceObservables M.empty (colOp colRes)+ let op = NodeStructuredTransform co+ return $ emptyLocalData op (SQLType dtOut)+ `parents` [untyped obs]++{-| Takes a function that operates on columns, and projects this+function onto the same operations for observables.++This is not very smart at the moment and will miss the more+complex operations such as broadcasting, etc.+-}+-- TODO: use for the numerical transforms instead of special stuff.+projectColFunction' ::+ (DynColumn -> DynColumn) ->+ LocalFrame -> LocalFrame+projectColFunction' f obs = projectColFunctionUntyped f =<< obs++projectColFunction2' ::+ (DynColumn -> DynColumn -> DynColumn) ->+ LocalFrame ->+ LocalFrame ->+ LocalFrame+projectColFunction2' f o1' o2' = do+ let f2 :: DynColumn -> DynColumn+ f2 dc = f (dc /- "_1") (dc /- "_2")+ o1 <- o1'+ o2 <- o2'+ let o = iPackTupleObs $ o1 N.:| [o2]+ projectColFunctionUntyped f2 o++colOpNoBroadcast :: GeneralizedColOp -> Try ColOp+colOpNoBroadcast = _replaceObservables M.empty+++_checkOrigin :: [UntypedColumnData] -> Try [UntypedColumnData]+_checkOrigin [] = pure []+_checkOrigin l =+ case _columnOrigin l of+ [_] -> pure l+ l' -> tryError $ sformat ("Too many distinct origins: "%sh) l'+++instance forall x. (DynColPackable x) => DynColPackable [x] where+ _packAsColumn = struct' . (_packAsColumn <$>)++instance DynColPackable DynColumn where+ _packAsColumn = id++instance forall ref a. DynColPackable (Column ref a) where+ _packAsColumn = pure . iUntypedColData++instance forall z1 z2. (DynColPackable z1, DynColPackable z2) => DynColPackable (z1, z2) where+ _packAsColumn (c1, c2) = struct' [_packAsColumn c1, _packAsColumn c2]++-- ******** Experimental ************+instance forall ref a. StaticColPackable2 ref (Column ref a) a where+ _staticPackAsColumn2 = id++-- Tuples are equivalent to tuples+instance forall a1 a2. TupleEquivalence (a1, a2) (a1, a2) where+ tupleFieldNames = NameTuple ["_1", "_2"]+++-- The equations that bind column packable stuff through their tuple equivalents+instance forall ref b a1 a2 z1 z2. (+ TupleEquivalence b (a1, a2),+ StaticColPackable2 ref z1 a1,+ StaticColPackable2 ref z2 a2) =>+ StaticColPackable2 ref (z1, z2) b where+ _staticPackAsColumn2 (c1, c2) =+ let+ x1 = iUntypedColData (_staticPackAsColumn2 c1 :: Column ref a1)+ x2 = iUntypedColData (_staticPackAsColumn2 c2 :: Column ref a2)+ names = tupleFieldNames :: NameTuple b+ in _unsafeBuildStruct [x1, x2] names++instance forall ref b a1 a2 a3 z1 z2 z3. (+ TupleEquivalence b (a1, a2, a3),+ StaticColPackable2 ref z1 a1,+ StaticColPackable2 ref z2 a2,+ StaticColPackable2 ref z3 a3) =>+ StaticColPackable2 ref (z1, z2, z3) b where+ _staticPackAsColumn2 (c1, c2, c3) =+ let+ x1 = iUntypedColData (_staticPackAsColumn2 c1 :: Column ref a1)+ x2 = iUntypedColData (_staticPackAsColumn2 c2 :: Column ref a2)+ x3 = iUntypedColData (_staticPackAsColumn2 c3 :: Column ref a3)+ names = tupleFieldNames :: NameTuple b+ in _unsafeBuildStruct [x1, x2, x3] names++++_unsafeBuildStruct :: [UntypedColumnData] -> NameTuple x -> Column ref x+_unsafeBuildStruct cols (NameTuple names) =+ if length cols /= length names+ then failure $ sformat ("The number of columns and names differs:"%sh%" and "%sh) cols names+ else+ let fnames = unsafeFieldName . T.pack <$> names+ uc = _buildStruct (fnames `zip` cols)+ z = forceRight uc+ in z { _cOp = _cOp z }++_buildTuple :: [UntypedColumnData] -> Try UntypedColumnData+_buildTuple l = _buildStruct (zip names l) where+ names = (:[]) . unsafeFieldName . ("_" <> ) . show' $ [0..(length l)]++_buildStruct :: [(FieldName, UntypedColumnData)] -> Try UntypedColumnData+_buildStruct cols = do+ let fields = GenColStruct $ (uncurry GeneralizedTransField . (fst &&& colOp . snd)) <$> V.fromList cols+ st <- structTypeFromFields $ (fst &&& unSQLType . colType . snd) <$> cols+ let name = structName st+ case _columnOrigin (snd <$> cols) of+ [ds] ->+ pure ColumnData {+ _cOrigin = ds,+ _cType = StrictType (Struct st),+ _cOp = fields,+ _cReferingPath = Just $ unsafeFieldName name+ }+ l -> tryError $ sformat ("_buildStruct: Too many distinct origins: "%sh) l++_columnOrigin :: [UntypedColumnData] -> [UntypedDataset]+_columnOrigin l =+ let+ groups = myGroupBy' (nodeId . colOrigin) l+ in (colOrigin . head . snd) <$> groups++-- The packing algorithm+-- It eliminates the broadcast variables into joins and then wraps the+-- remaining transform into structured transform.+-- TODO: the data structure and the algorithms use unsafe operations+-- It should be transfromed to safe operations eventually.+_pack1 :: (HasCallStack) => Column ref a -> Dataset a+_pack1 ucd =+ let gco = colOp ucd+ ulds = _collectObs gco+ in case ulds of+ [] -> let co = forceRight $ colOpNoBroadcast gco in+ _packCol1 ucd co+ (h : t) -> forceRight $ _packCol1WithObs ucd (h N.:| t)++_packCol1WithObs :: Column ref a -> N.NonEmpty UntypedLocalData -> Try (Dataset a)+_packCol1WithObs c ulds = do+ let packedObs = iPackTupleObs ulds+ -- Retrieve the field names in the pack structure.+ let st = structTypeTuple (unSQLType . nodeType <$> ulds)+ let names = V.toList $ structFieldName <$> structFields st+ let paths = FieldPath . V.fromList . (unsafeFieldName "_2" : ) . (:[]) <$> names+ let m = M.fromList ((nodeId <$> N.toList ulds) `zip` paths)+ let joined = broadcastPair (colOrigin c) packedObs+ co <- _replaceObservables m (colOp c)+ let no = NodeStructuredTransform co+ let f = emptyDataset no (colType c) `parents` [untyped joined]+ return f+++_replaceObservables :: M.Map NodeId FieldPath -> GeneralizedColOp -> Try ColOp+-- Special case for when there is nothing in the dictionary+_replaceObservables m (GenColExtraction fp) | M.null m = pure $ ColExtraction fp+_replaceObservables _ (GenColExtraction (FieldPath v)) =+ -- It is a normal extraction, prepend the suffix of the data structure.+ pure (ColExtraction (FieldPath v')) where+ v' = V.cons (unsafeFieldName "_1") v+_replaceObservables _ (GenColLit dt c) = pure (ColLit dt (toJSON c))+_replaceObservables m (GenColFunction n v) =+ ColFunction n <$> sequence (_replaceObservables m <$> v)+_replaceObservables m (GenColStruct v) = ColStruct <$> sequence (_replaceField m <$> v)+_replaceObservables m (BroadcastColOp uld) =+ case M.lookup (nodeId uld) m of+ Just p -> pure $ ColExtraction p+ Nothing -> tryError $ "_replaceObservables: error: missing key " <> show' uld <> " in " <> show' m++_replaceField :: M.Map NodeId FieldPath -> GeneralizedTransField -> Try TransformField+_replaceField m (GeneralizedTransField n v) = TransformField n <$> _replaceObservables m v++-- Unconditionally packs the column into a dataset.+_packCol1 :: Column ref a -> ColOp -> Dataset a+-- Special case for column operations that are no-ops: return the dataset itself.+_packCol1 c (ColExtraction (FieldPath v)) | V.null v =+ -- TODO: we should not need to force this operation.+ forceRight $ castType (colType c) (colOrigin c)+_packCol1 c op =+ emptyDataset (NodeStructuredTransform op) (colType c)+ `parents` [untyped (colOrigin c)]++_collectObs :: GeneralizedColOp -> [UntypedLocalData]+_collectObs (GenColFunction _ v) = concat (_collectObs <$> V.toList v)+_collectObs (BroadcastColOp uld) = [uld]+_collectObs (GenColStruct v) = concat (_collectObs . gtfValue <$> V.toList v)+_collectObs _ = [] -- Anything else has no broadcast info.
+ src/Spark/Core/Internal/Groups.hs view
@@ -0,0 +1,348 @@+{-# LANGUAGE ScopedTypeVariables #-}+{-# LANGUAGE OverloadedStrings #-}+{-# LANGUAGE RankNTypes #-}+{-# LANGUAGE FlexibleContexts #-}++-- A number of standard aggregation functions.++module Spark.Core.Internal.Groups(+ GroupData,+ LogicalGroupData,+ -- Typed functions+ groupByKey,+ mapGroup,+ aggKey,+ groupAsDS+ -- Developer++) where++import qualified Data.Text as T+import qualified Data.Vector as V+import Formatting+import Debug.Trace(trace)++import Spark.Core.Internal.DatasetStructures+import Spark.Core.Internal.ColumnStructures+import Spark.Core.Internal.ColumnFunctions(untypedCol, colType, colOp, iUntypedColData, colOrigin, castTypeCol, dropColReference, genColOp)+import Spark.Core.Internal.DatasetFunctions+import Spark.Core.Internal.LocalDataFunctions()+import Spark.Core.Internal.FunctionsInternals+import Spark.Core.Internal.TypesFunctions(tupleType, structTypeFromFields)+import Spark.Core.Internal.OpStructures+import Spark.Core.Internal.Projections+import Spark.Core.Internal.TypesStructures+import Spark.Core.Internal.Utilities+import Spark.Core.Internal.RowStructures(Cell)+import Spark.Core.Try+import Spark.Core.StructuresInternal+import Spark.Core.Internal.CanRename++{-| A dataset that has been partitioned according to some given field.+-}+data GroupData key val = GroupData {+ -- The dataset of reference for this group+ _gdRef :: !UntypedDataset,+ -- The columns used to partition the data by keys.+ _gdKey :: !GroupColumn,+ -- The columns that contain the values.+ _gdValue :: !GroupColumn+}++type LogicalGroupData = Try UntypedGroupData++-- A column in a group, that can be used either for key or for values.+-- It is different from the column data, because it does not include+-- broadcast data.+data GroupColumn = GroupColumn {+ _gcType :: !DataType,+ _gcOp :: !ColOp,+ _gcRefName :: !(Maybe FieldName)+} deriving (Eq, Show)+++{-| (developper)++A group data type with no typing information.+-}+type UntypedGroupData = GroupData Cell Cell++-- type GroupTry a = Either T.Text a++-- A useful type when chaining operations withing groups.+data PipedTrans =+ PipedError !T.Text+ | PipedDataset !UntypedDataset+ | PipedGroup !UntypedGroupData+ deriving (Show)+++{-| Performs a logical group of data based on a key.+-}+groupByKey :: (HasCallStack) => Column ref key -> Column ref val -> GroupData key val+groupByKey keys vals = forceRight $ _castGroup (colType keys) (colType vals) =<< _groupByKey (iUntypedColData keys) (iUntypedColData vals)++{-| Transforms the values in a group.+-}+-- This only allows direct transforms, so it is probably valid in all cases.+mapGroup :: GroupData key val -> (forall ref. Column ref val -> Column ref val') -> GroupData key val'+mapGroup g f =+ let c = _valueCol g+ c' = f (_unsafeCastColData c)+ -- Assume for now that there is no broadcast.+ -- TODO: deal with broadcast eventually+ gVals = forceRight $ _groupCol c'+ in g { _gdValue = gVals }++{-| The generalized value transform.++This generalizes mapGroup to allow more complex transforms involving joins,+groups, etc.+-}+-- TODO: this can fail+-- magGroupGen :: (forall ref. Column ref val -> Dataset val') -> GroupData key val -> GroupData key val'+-- magGroupGen _ _ = undefined++{-| Given a group and an aggregation function, aggregates the data.++Note: not all the reduction functions may be used in this case. The analyzer+will fail if the function is not universal.+-}+-- TODO: it should be a try, this can fail+aggKey :: (HasCallStack) => GroupData key val -> (forall ref. Column ref val -> LocalData val') -> Dataset (key, val')+aggKey gd f = trace "aggKey" $+ let ugd = _untypedGroup gd+ keyt = traceHint "aggKey: keyt: " $ mapGroupKeys gd colType+ valt = traceHint "aggKey: valt: " $ mapGroupValues gd colType+ -- We call the function twice: the first one to recover the type info,+ -- and the second time to perform the unrolling.+ -- TODO we should be able to do it in one pass instead.+ fOut = traceHint "aggKey: fOut: " $ f (mapGroupValues gd dropColReference)+ valt' = traceHint "aggKey: valt': " $ nodeType fOut+ t = traceHint "aggKey: t: " $ tupleType keyt valt'+ f' c = untypedLocalData . f <$> castTypeCol valt c+ tud = traceHint "aggKey: tud: " $ _aggKey ugd f'+ res = castType' t tud+ in forceRight res++{-| Creates a group by 'expanding' a value into a potentially large collection.++Note on performance: this function is optimized to work at any scale and may not+be the most efficient when the generated collections are small (a few elements).+-}+-- TODO: it should be a try, this can fail+-- expand :: Column ref key -> Column ref val -> (LocalData val -> Dataset val') -> GroupData key val'+-- expand = undefined++{-| Builds groups within groups.++This function allows groups to be constructed from each collections inside a+group.++This function is usually not used directly by the user, but rather as part of+more complex pipelines that may involve multiple levels of nesting.+-}+-- groupInGroup :: GroupData key val -> (forall ref. Column ref val -> GroupData key' val') -> GroupData (key', key) val'+-- groupInGroup _ _ = undefined++{-| Reduces a group in group into a single group.+-}+-- aggGroup :: GroupData (key, key') val -> (forall ref. LocalData key -> Column ref val -> LocalData val') -> GroupData key val+-- aggGroup _ _ = undefined++{-| Returns the collapsed representation of a grouped dataset, discarding group+information.+-}+groupAsDS :: forall key val. GroupData key val -> Dataset (key, val)+groupAsDS g = pack s where+ c1 = _unsafeCastColData (_keyCol g) :: Column UnknownReference key+ c2 = _unsafeCastColData (_valueCol g) :: Column UnknownReference val+ s = struct (c1, c2) :: Column UnknownReference (key, val)++mapGroupKeys :: GroupData key val -> (forall ref. Column ref key -> a) -> a+mapGroupKeys gd f =+ f (_unsafeCastColData (_keyCol gd))++mapGroupValues :: GroupData key val -> (forall ref. Column ref val -> a) -> a+mapGroupValues gd f =+ f (_unsafeCastColData (_valueCol gd))++-- ******** INSTANCES ***********+++instance Show (GroupData key val) where+ show gd = T.unpack s where+ s = sformat ("GroupData[key="%sh%", val="%sh%"]") (_gdKey gd) (_gdValue gd)++-- ******** PRIVATE METHODS ********++_keyCol :: GroupData key val -> UntypedColumnData+_keyCol gd = ColumnData {+ _cOrigin = _gdRef gd,+ _cType = _gcType (_gdKey gd),+ _cOp = genColOp . _gcOp . _gdKey $ gd,+ _cReferingPath = _gcRefName . _gdKey $ gd+ }++_valueCol :: GroupData key val -> UntypedColumnData+_valueCol gd = ColumnData {+ _cOrigin = _gdRef gd,+ _cType = _gcType (_gdValue gd),+ _cOp = genColOp . _gcOp . _gdValue $ gd,+ _cReferingPath = _gcRefName . _gdValue $ gd+ }+++_pError :: T.Text -> PipedTrans+_pError = PipedError++_unrollTransform :: PipedTrans -> NodeId -> UntypedNode -> PipedTrans+_unrollTransform start nid un | nodeId un == nid = start+_unrollTransform start nid un = case nodeParents un of+ [p] ->+ let pt' = _unrollTransform start nid p in _unrollStep pt' un+ _ ->+ _pError $ sformat (sh%": operations with multiple parents cannot be used in groups yet.") un++_unrollStep :: PipedTrans -> UntypedNode -> PipedTrans+_unrollStep pt un = traceHint ("_unrollStep: pt=" <> show' pt <> " un=" <> show' un <> " res=") $+ let op = nodeOp un+ dt = unSQLType (nodeType un) in case nodeParents un of+ [p] ->+ case (pt, op) of+ (PipedError e, _) -> PipedError e+ (PipedDataset ds, NodeStructuredTransform _) ->+ -- This is simply dointg a DS -> DS transform.+ -- TODO: this breaks the encapsulation of ComputeNode+ let ds' = updateNode un (\un' -> un' { _cnParents = V.singleton (untyped ds)})+ in PipedDataset ds'+ (PipedGroup g, NodeStructuredTransform co) ->+ _unrollGroupTrans g co+ (PipedGroup g, NodeAggregatorReduction uao) ->+ case uaoInitialOuter uao of+ OpaqueAggTransform x -> _pError $ sformat ("Cannot apply opaque transform in the context of an aggregation: "%sh) x+ InnerAggOp ao ->+ PipedDataset $ _applyAggOp dt ao g+ _ -> _pError $ sformat (sh%": Operation not supported with trans="%sh%" and parents="%sh) op pt p+ l -> _pError $ sformat (sh%": expected one parent but got "%sh) un l++-- dt: output type of the aggregation op+_applyAggOp :: (HasCallStack) => DataType -> AggOp -> UntypedGroupData -> UntypedDataset+_applyAggOp dt ao ugd = traceHint ("_applyAggOp dt=" <> show' dt <> " ao=" <> show' ao <> " ugd=" <> show' ugd <> " res=") $+ -- Reset the names to make sure there are no collision.+ let c1 = untypedCol (_keyCol ugd) @@ T.unpack "_1"+ c2 = untypedCol (_valueCol ugd) @@ T.unpack "_2"+ s = struct' [c1, c2]+ p = pack1 <$> s+ ds = forceRight p+ -- The structure of the result dataframe+ keyDt = unSQLType (colType (_keyCol ugd))+ st' = structTypeFromFields [(unsafeFieldName "key", keyDt), (unsafeFieldName "agg", dt)]+ -- The keys are different, so we know we this operation is legit:+ st = forceRight st'+ resDt = SQLType . StrictType . Struct $ st+ ds2 = emptyDataset (NodeGroupedReduction ao) resDt `parents` [untyped ds]+ in ds2++_unrollGroupTrans :: UntypedGroupData -> ColOp -> PipedTrans+_unrollGroupTrans ugd co =+ let gco = colOp (_valueCol ugd) in case colOpNoBroadcast gco of+ Left x -> _pError $ "_unrollGroupTrans (1): using unimplemented feature:" <> show' x+ Right co' -> case _combineColOp co' co of+ -- TODO: this is ugly, we are loosing the error structure.+ Left x -> _pError $ "_unrollGroupTrans (2): failure with " <> show' x+ Right co'' -> case _groupCol $ _transformCol co'' (_valueCol ugd) of+ Left x -> _pError $ "_unrollGroupTrans (3): failure with " <> show' x+ Right g -> PipedGroup $ ugd { _gdValue = g }++-- TODO: this should be moved to ColumnFunctions+_transformCol :: ColOp -> UntypedColumnData -> UntypedColumnData+-- TODO: at this point, it should be checked for correctness (the fields+-- being extracted should exist)+_transformCol co ucd = ucd { _cOp = genColOp co }++-- Takes a column operation and chain it with another column operation.+_combineColOp :: ColOp -> ColOp -> Try ColOp+_combineColOp _ (x @ (ColLit _ _)) = pure x+_combineColOp x (ColFunction fn v) =+ ColFunction fn <$> sequence (_combineColOp x <$> v)+_combineColOp x (ColExtraction fp) = _extractColOp x (V.toList (unFieldPath fp))+_combineColOp x (ColStruct v) =+ ColStruct <$> sequence (f <$> v) where+ f (TransformField n val) = TransformField n <$> _combineColOp x val++_extractColOp :: ColOp -> [FieldName] -> Try ColOp+_extractColOp x [] = pure x+_extractColOp (ColStruct s) (fn : t) =+ case V.find (\x -> tfName x == fn) s of+ Just (TransformField _ co) ->+ _extractColOp co t+ Nothing ->+ tryError $ sformat ("Expected to find field "%sh%" in structure "%sh) fn s+_extractColOp x y =+ tryError $ sformat ("Cannot perform extraction "%sh%" on column operation "%sh) y x++_aggKey :: UntypedGroupData -> (UntypedColumnData -> Try UntypedLocalData) -> Try UntypedDataset+_aggKey ugd f =+ let inputDt = unSQLType . colType . _valueCol $ ugd+ p = placeholder inputDt :: UntypedDataset+ startNid = nodeId p in do+ uld <- f (_unsafeCastColData (asCol p))+ case _unrollTransform (PipedGroup ugd) startNid (untyped uld) of+ PipedError t -> tryError t+ PipedGroup g ->+ -- This is a programming error+ tryError $ sformat ("Expected a dataframe at the output but got a group: "%sh) g+ PipedDataset ds -> pure ds++_unsafeCastColData :: Column ref a -> Column ref' a'+_unsafeCastColData c = c { _cType = _cType c }++{-| Checks that the group can be cast.+-}+_castGroup ::+ SQLType key -> SQLType val -> UntypedGroupData -> Try (GroupData key val)+_castGroup (SQLType keyType) (SQLType valType) ugd =+ let keyType' = unSQLType . colType . _keyCol $ ugd+ valType' = unSQLType . colType . _valueCol $ ugd in+ if keyType == keyType'+ then if valType == valType'+ then+ pure ugd { _gdRef = _gdRef ugd }+ else+ tryError $ sformat ("The value column (of type "%sh%") cannot be cast to type "%sh) valType' valType+ else+ tryError $ sformat ("The value column (of type "%sh%") cannot be cast to type "%sh) keyType' keyType++_untypedGroup :: GroupData key val -> UntypedGroupData+_untypedGroup gd = gd { _gdRef = _gdRef gd }++_groupByKey :: UntypedColumnData -> UntypedColumnData -> LogicalGroupData+_groupByKey keys vals =+ if nodeId (colOrigin keys) == nodeId (colOrigin vals)+ then+ -- Get the latest data (packed)+ -- TODO: put a scoping+ let s = struct (keys, vals) :: Column UnknownReference (Cell, Cell)+ ds = pack1 s+ keys' = ds // _1+ vals' = ds // _2+ in do+ gKeys <- _groupCol keys'+ gVals <- _groupCol vals'+ return GroupData {+ _gdRef = colOrigin keys',+ _gdKey = gKeys,+ _gdValue = gVals+ }+ else+ tryError $ sformat ("The columns have different origin: "%sh%" and "%sh) keys vals++_groupCol :: Column ref a -> Try GroupColumn+_groupCol c = do+ co <- colOpNoBroadcast (colOp c)+ return GroupColumn {+ _gcType = unSQLType $ colType c,+ _gcOp = co,+ _gcRefName = Nothing+ }
+ src/Spark/Core/Internal/Joins.hs view
@@ -0,0 +1,93 @@+{-# LANGUAGE OverloadedStrings #-}+{-# LANGUAGE FlexibleContexts #-}+{-| Exposes some of Spark's joining algorithms.+-}+module Spark.Core.Internal.Joins(+ join,+ join',+ joinInner,+ joinInner',+ joinObs,+ joinObs'+) where++import qualified Data.Aeson as A+import qualified Data.Vector as V+import Control.Arrow++import Spark.Core.Internal.ColumnStructures+import Spark.Core.Internal.ColumnFunctions+import Spark.Core.Internal.DatasetStructures+import Spark.Core.Internal.DatasetFunctions+import Spark.Core.Internal.FunctionsInternals+import Spark.Core.Internal.OpStructures+import Spark.Core.Internal.TypesStructures+import Spark.Core.Internal.Utilities+import Spark.Core.Internal.TypesFunctions(structTypeFromFields)+import Spark.Core.Try+import Spark.Core.StructuresInternal(unsafeFieldName)++{-| Standard (inner) join on two sets of data.+-}+join :: Column ref1 key -> Column ref1 value1 -> Column ref2 key -> Column ref2 value2 -> Dataset (key, value1, value2)+join = joinInner++{-| Untyped version of the standard join.+-}+join' :: DynColumn -> DynColumn -> DynColumn -> DynColumn -> DataFrame+join' = joinInner'++{-| Explicit inner join.+-}+joinInner :: Column ref1 key -> Column ref1 value1 -> Column ref2 key -> Column ref2 value2 -> Dataset (key, value1, value2)+joinInner key1 val1 key2 val2 = unsafeCastDataset (forceRight df) where+ df = joinInner' (untypedCol key1) (untypedCol val1) (untypedCol key2) (untypedCol val2)++{-| Untyped version of the inner join.+-}+joinInner' :: DynColumn -> DynColumn -> DynColumn -> DynColumn -> DataFrame+joinInner' key1 val1 key2 val2 = do+ df1 <- pack' (struct' [key1, val1])+ df2 <- pack' (struct' [key2, val2])+ dt <- _joinTypeInner key1 val1 val2+ let so = StandardOperator { soName = "org.spark.Join", soOutputType = dt, soExtra = A.String "inner" }+ let ds = emptyDataset (NodeDistributedOp so) (SQLType dt)+ let f ds' = ds' { _cnParents = V.fromList [untyped df1, untyped df2] }+ return $ updateNode ds f++{-| Broadcasts an observable alongside a dataset to make it available as an+extra column.+-}+-- This is the low-level operation that is used to implement the other+-- broadcast operations.+joinObs :: (HasCallStack) => Column ref val -> LocalData val' -> Dataset (val, val')+joinObs c ld =+ -- TODO: has a forcing at the last moment so that we can at least+ -- have stronger guarantees in the type coercion.+ unsafeCastDataset $ forceRight $ joinObs' (untypedCol c) (pure (untypedLocalData ld))++{-| Broadcasts an observable along side a dataset to make it available as+an extra column.++The resulting dataframe has 2 columns:+ - one column called 'values'+ - one column called 'broadcast'++ Note: this is a low-level operation. Users may want to use broadcastObs instead.+-}+-- TODO: what is the difference with broadcastPair???+joinObs' :: DynColumn -> LocalFrame -> DataFrame+joinObs' dc lf = do+ let df = pack' dc+ dc' <- df+ c <- asCol' df+ o <- lf+ st <- structTypeFromFields [(unsafeFieldName "values", unSQLType (colType c)), (unsafeFieldName "broadcast", unSQLType (nodeType o))]+ let sqlt = SQLType (StrictType (Struct st))+ return $ emptyDataset NodeBroadcastJoin sqlt `parents` [untyped dc', untyped o]++_joinTypeInner :: DynColumn -> DynColumn -> DynColumn -> Try DataType+_joinTypeInner kcol col1 col2 = do+ cs <- sequence [kcol, col1, col2]+ st <- structTypeFromFields $ (colFieldName &&& unSQLType . colType) <$> cs+ return $ StrictType (Struct st)
+ src/Spark/Core/Internal/LocalDataFunctions.hs view
@@ -0,0 +1,120 @@+{-# OPTIONS_GHC -fno-warn-orphans #-}+{-# LANGUAGE TypeSynonymInstances #-}+{-# LANGUAGE OverloadedStrings #-}+{-# LANGUAGE FlexibleInstances #-}+{-# LANGUAGE ScopedTypeVariables #-}++-- A number of functions related to local data.++module Spark.Core.Internal.LocalDataFunctions(+ constant,+ iPackTupleObs+) where++import Data.Aeson(toJSON, Value(Null))+import qualified Data.Text as T+import qualified Data.List.NonEmpty as N+import Control.Exception.Base(assert)++import Spark.Core.Internal.DatasetFunctions+import Spark.Core.Internal.DatasetStructures+import Spark.Core.Internal.TypesFunctions+import Spark.Core.Internal.TypesStructures+import Spark.Core.Internal.OpStructures+import Spark.Core.Internal.Utilities+import Spark.Core.Internal.TypesGenerics(SQLTypeable, buildType)+import Spark.Core.Row++constant :: (ToSQL a, SQLTypeable a) => a -> LocalData a+constant cst =+ let+ sqlt = buildType+ dt = unSQLType sqlt+ in emptyLocalData (NodeLocalLit dt (toJSON (valueToCell cst))) sqlt++{-| (developer API)++This function takes a non-empty list of observables and puts them+into a structure. The names of each element is _0 ... _(n-1)+-}+iPackTupleObs :: N.NonEmpty UntypedLocalData -> UntypedLocalData+iPackTupleObs ulds =+ let dt = structTypeTuple' (unSQLType . nodeType <$> ulds)+ so = StandardOperator {+ soName = "org.spark.LocalPack",+ soOutputType = dt,+ soExtra = Null }+ op = NodeLocalOp so+ in emptyLocalData op (SQLType dt)+ `parents` (untyped <$> N.toList ulds)++instance (Num a, ToSQL a, SQLTypeable a) => Num (LocalData a) where+ -- TODO: convert all that to use column operations+ (+) = _binOp "org.spark.LocalPlus"+ (-) = _binOp "org.spark.LocalMinus"+ (*) = _binOp "org.spark.LocalMult"+ abs = _unaryOp "org.spark.LocalAbs"+ signum = _unaryOp "org.spark.LocalSignum"+ fromInteger x = constant (fromInteger x :: a)+ negate = _unaryOp "org.spark.LocalNegate"++instance forall a. (ToSQL a, Enum a, SQLTypeable a) => Enum (LocalData a) where+ toEnum x = constant (toEnum x :: a)+ fromEnum = failure "Cannot use fromEnum against a local data object"+ -- TODO(kps) some of the others are still available for implementation++instance (Num a, Ord a) => Ord (LocalData a) where+ compare = failure "You cannot compare instances of LocalData. (yet)."+ min = _binOp "org.spark.LocalMin"+ max = _binOp "org.spark.LocalMax"++instance forall a. (Real a, ToSQL a, SQLTypeable a) => Real (LocalData a) where+ toRational = failure "Cannot convert LocalData to rational"++instance (ToSQL a, Integral a, SQLTypeable a) => Integral (LocalData a) where+ quot = _binOp "org.spark.LocalQuotient"+ rem = _binOp "org.spark.LocalReminder"+ div = _binOp "org.spark.LocalDiv"+ mod = _binOp "org.spark.LocalMod"+ quotRem = failure "quotRem is not implemented (yet). Use quot and rem."+ divMod = failure "divMod is not implemented (yet). Use div and mod."+ toInteger = failure "Cannot convert LocalData to integer"++instance (ToSQL a, SQLTypeable a, Fractional a) => Fractional (LocalData a) where+ fromRational x = constant (fromRational x :: a)+ (/) = _binOp "org.spark.LocalDiv"+++_unaryOp :: T.Text -> LocalData a -> LocalData a+_unaryOp optxt ld =+ let so = StandardOperator {+ soName = optxt,+ soOutputType = unSQLType $ nodeType ld,+ soExtra = Null }+ op = NodeLocalOp so in+ emptyLocalData op (nodeType ld)+ `parents` [untyped ld]++_binOp :: T.Text -> LocalData a -> LocalData a -> LocalData a+_binOp optxt ld1 ld2 = assert (nodeType ld1 == nodeType ld2) $+ let so = StandardOperator {+ soName = optxt,+ soOutputType = unSQLType $ nodeType ld1,+ soExtra = Null }+ op = NodeLocalOp so in+ emptyLocalData op (nodeType ld1)+ `parents` [untyped ld1, untyped ld2]++-- TODO(kps) more input tests+_binOp' :: StandardOperator -> LocalData a -> LocalData a -> LocalData a+_binOp' so ld1 ld2 = assert (nodeType ld1 == nodeType ld2) $+ let op = NodeLocalOp so in+ emptyLocalData op (nodeType ld1)+ `parents` [untyped ld1, untyped ld2]++_intOperator :: T.Text -> StandardOperator+_intOperator optxt = StandardOperator {+ soName = optxt,+ soOutputType = intType,+ soExtra = Null+}
+ src/Spark/Core/Internal/LocatedBase.hs view
@@ -0,0 +1,51 @@+-- Taken from https://hackage.haskell.org/package/located-base-0.1.1.0/docs/src/GHC-Err-Located.html++{-# LANGUAGE CPP #-}+{-# LANGUAGE ConstraintKinds #-}+{-# LANGUAGE ImplicitParams #-}+{-# LANGUAGE OverloadedStrings #-}+module Spark.Core.Internal.LocatedBase (error, undefined, HasCallStack, showCallStack) where++#if __GLASGOW_HASKELL__ < 800++import GHC.SrcLoc+import GHC.Stack (CallStack, getCallStack)+import Prelude hiding (error, undefined)+import qualified Prelude+import Text.Printf+import Data.Text(Text, unpack)++type HasCallStack = (?callStack :: CallStack)++error :: HasCallStack => Text -> a+error msg = Prelude.error (unpack msg ++ "\n" ++ showCallStack ?callStack)++undefined :: HasCallStack => a+undefined = error "Prelude.undefined"++showCallStack :: CallStack -> String+showCallStack stk = case getCallStack stk of+ _:locs -> unlines $ "Callstack:" : map format locs+ _ -> Prelude.error "showCallStack: empty call-stack"+ where+ format (fn, loc) = printf " %s, called at %s" fn (showSrcLoc loc)++#else++import GHC.Stack(HasCallStack, CallStack, prettyCallStack)+import qualified GHC.Stack()+import Data.Text(Text, unpack)+import qualified Prelude+import Prelude((.))++{-# DEPRECATED showCallStack "use GHC.Stack.prettyCallStack instead" #-}+showCallStack :: CallStack -> Prelude.String+showCallStack = prettyCallStack++error :: HasCallStack => Text -> a+error = Prelude.error . unpack++undefined :: HasCallStack => a+undefined = error "Prelude.undefined"++#endif
+ src/Spark/Core/Internal/ObservableStandard.hs view
@@ -0,0 +1,13 @@++module Spark.Core.Internal.ObservableStandard(+ asDouble) where++import Spark.Core.Internal.ColumnStandard+import Spark.Core.Internal.DatasetStructures+import Spark.Core.Internal.FunctionsInternals+import Spark.Core.Internal.TypesGenerics(SQLTypeable)++{-| Casts a local data as a double.+-}+asDouble :: (Num a, SQLTypeable a) => LocalData a -> LocalData Double+asDouble = projectColFunction asDoubleCol
+ src/Spark/Core/Internal/OpFunctions.hs view
@@ -0,0 +1,235 @@+{-# OPTIONS_GHC -fno-warn-orphans #-}+{-# LANGUAGE OverloadedStrings #-}+{-# LANGUAGE FlexibleContexts #-}+++module Spark.Core.Internal.OpFunctions(+ simpleShowOp,+ prettyShowOp,+ extraNodeOpData,+ hashUpdateNodeOp,+ prettyShowColOp,+ hdfsPath,+ updateSourceStamp,+ prettyShowColFun+) where++import qualified Data.Text as T+import qualified Data.Aeson as A+import qualified Data.Vector as V+import qualified Data.ByteString as BS+import qualified Data.ByteString.Lazy as LBS+import qualified Data.HashMap.Strict as HM+import Data.Text(Text)+import Data.Aeson((.=), toJSON)+import Data.Char(isSymbol)+import qualified Crypto.Hash.SHA256 as SHA++import Spark.Core.Internal.OpStructures+import Spark.Core.Internal.Utilities+import Spark.Core.Try++-- (internal)+-- The serialized type of a node operation, as written in+-- the JSON description.+simpleShowOp :: NodeOp -> T.Text+simpleShowOp (NodeLocalOp op) = soName op+simpleShowOp (NodeDistributedOp op) = soName op+simpleShowOp (NodeLocalLit _ _) = "org.spark.LocalLiteral"+simpleShowOp (NodeOpaqueAggregator op) = soName op+simpleShowOp (NodeAggregatorReduction ua) =+ _jsonShowAggTrans . uaoInitialOuter $ ua+simpleShowOp (NodeAggregatorLocalReduction ua) = _jsonShowSGO . uaoMergeBuffer $ ua+simpleShowOp (NodeStructuredTransform _) = "org.spark.Select"+simpleShowOp (NodeDistributedLit _ _) = "org.spark.DistributedLiteral"+simpleShowOp (NodeGroupedReduction _) = "org.spark.GroupedReduction"+simpleShowOp (NodeReduction _) = "org.spark.Reduction"+simpleShowOp NodeBroadcastJoin = "org.spark.BroadcastJoin"+simpleShowOp (NodePointer _) = "org.spark.PlaceholderCache"++{-| A text representation of the operation that is appealing for humans.+-}+prettyShowOp :: NodeOp -> T.Text+prettyShowOp (NodeAggregatorReduction uao) =+ case uaoInitialOuter uao of+ OpaqueAggTransform so -> soName so+ -- Try to have a pretty name for the simple reductions+ InnerAggOp (AggFunction n _) -> n+ _ -> simpleShowOp (NodeAggregatorReduction uao)+prettyShowOp x = simpleShowOp x+++-- A human-readable string that represents column operations.+prettyShowColOp :: ColOp -> T.Text+prettyShowColOp (ColExtraction fpath) = T.pack (show fpath)+prettyShowColOp (ColFunction txt cols) =+ prettyShowColFun txt (V.toList (prettyShowColOp <$> cols))+prettyShowColOp (ColLit _ cell) = show' cell+prettyShowColOp (ColStruct s) =+ "struct(" <> T.intercalate "," (prettyShowColOp . tfValue <$> V.toList s) <> ")"++{-| If the node is a reading operation, returns the HdfsPath of the source+that is going to be read.+-}+hdfsPath :: NodeOp -> Maybe HdfsPath+hdfsPath (NodeDistributedOp so) =+ if soName so == "org.spark.GenericDatasource"+ then case soExtra so of+ A.Object o -> case HM.lookup "inputPath" o of+ Just (A.String x) -> Just . HdfsPath $ x+ _ -> Nothing+ _ -> Nothing+ else Nothing+hdfsPath _ = Nothing++{-| Updates the input stamp if possible.++If the node cannot be updated, it is most likely a programming error: an error+is returned.+-}+updateSourceStamp :: NodeOp -> DataInputStamp -> Try NodeOp+updateSourceStamp (NodeDistributedOp so) (DataInputStamp dis) | soName so == "org.spark.GenericDatasource" =+ case soExtra so of+ A.Object o ->+ let extra' = A.Object $ HM.insert "inputStamp" (A.toJSON dis) o+ so' = so { soExtra = extra' }+ in pure $ NodeDistributedOp so'+ x -> tryError $ "updateSourceStamp: Expected dict, got " <> show' x+updateSourceStamp x _ =+ tryError $ "updateSourceStamp: Expected NodeDistributedOp, got " <> show' x++_jsonShowAggTrans :: AggTransform -> Text+_jsonShowAggTrans (OpaqueAggTransform op) = soName op+_jsonShowAggTrans (InnerAggOp _) = "org.spark.StructuredReduction"+++_jsonShowSGO :: SemiGroupOperator -> Text+_jsonShowSGO (OpaqueSemiGroupLaw so) = soName so+_jsonShowSGO (UdafSemiGroupOperator ucn) = ucn+_jsonShowSGO (ColumnSemiGroupLaw sfn) = sfn+++_prettyShowAggOp :: AggOp -> T.Text+_prettyShowAggOp (AggUdaf _ ucn fp) = ucn <> "(" <> show' fp <> ")"+_prettyShowAggOp (AggFunction sfn v) = prettyShowColFun sfn r where+ r = V.toList (show' <$> v)+_prettyShowAggOp (AggStruct v) =+ "struct(" <> T.intercalate "," (_prettyShowAggOp . afValue <$> V.toList v) <> ")"++_prettyShowAggTrans :: AggTransform -> Text+_prettyShowAggTrans (OpaqueAggTransform op) = soName op+_prettyShowAggTrans (InnerAggOp ao) = _prettyShowAggOp ao++_prettyShowSGO :: SemiGroupOperator -> Text+_prettyShowSGO (OpaqueSemiGroupLaw so) = soName so+_prettyShowSGO (UdafSemiGroupOperator ucn) = ucn+_prettyShowSGO (ColumnSemiGroupLaw sfn) = sfn++-- (internal)+-- The extra data associated with the operation, and that is required+-- by the backend to successfully perform the operation.+-- We pass the type as seen by Karps (along with some extra information about+-- nullability). This information is required by spark to analyze the exact+-- type of some operations.+extraNodeOpData :: NodeOp -> A.Value+extraNodeOpData (NodeLocalLit dt cell) =+ A.object [ "type" .= toJSON dt,+ "content" .= toJSON cell]+extraNodeOpData (NodeStructuredTransform st) = toJSON st+extraNodeOpData (NodeDistributedLit dt lst) =+ -- The backend deals with all the details translating the augmented type+ -- as a SQL datatype.+ A.object [ "cellType" .= toJSON dt,+ "content" .= toJSON lst]+extraNodeOpData (NodeDistributedOp so) = soExtra so+extraNodeOpData (NodeGroupedReduction ao) = toJSON ao+extraNodeOpData (NodeAggregatorReduction ua) =+ case uaoInitialOuter ua of+ OpaqueAggTransform so -> toJSON (soExtra so)+ InnerAggOp ao -> toJSON ao+extraNodeOpData (NodeOpaqueAggregator so) = soExtra so+extraNodeOpData (NodeLocalOp so) = soExtra so+extraNodeOpData NodeBroadcastJoin = A.Null+extraNodeOpData (NodeReduction _) = A.Null -- TODO: should it send something?+extraNodeOpData (NodeAggregatorLocalReduction _) = A.Null -- TODO: should it send something?+extraNodeOpData (NodePointer p) =+ A.object [+ "computation" .= toJSON (pointerComputation p),+ "path" .= toJSON (pointerPath p)+ ]++-- Adds the content of a node op to a hash.+-- Right now, this builds the json representation and passes it+-- to the hash function, which simplifies the verification on+-- on the server side.+-- TODO: this depends on some implementation details such as the hashing+-- function used by Aeson.+hashUpdateNodeOp :: SHA.Ctx -> NodeOp -> SHA.Ctx+hashUpdateNodeOp ctx op = _hashUpdateJson ctx $ A.object [+ "op" .= simpleShowOp op,+ "extra" .= extraNodeOpData op]+++prettyShowColFun :: T.Text -> [Text] -> T.Text+prettyShowColFun txt [col] | _isSym txt =+ T.concat [txt, " ", col]+prettyShowColFun txt [col1, col2] | _isSym txt =+ -- This is not perfect for complex operations, but it should get the job done+ -- for now.+ -- TODO eventually use operator priority here+ T.concat [col1, " ", txt, " ", col2]+prettyShowColFun txt cols =+ let vals = T.intercalate ", " cols in+ T.concat [txt, "(", vals, ")"]++_isSym :: T.Text -> Bool+_isSym txt = all isSymbol (T.unpack txt)++-- This schema is not great because there is some ambiguity about the final+-- nodes.+-- Someone could craft a JSON that would confuse the object detection.+-- Not sure if this is much of a security risk anyway.+instance A.ToJSON ColOp where+ toJSON (ColExtraction fp) = A.object [+ "colOp" .= T.pack "extraction",+ "field" .= toJSON fp]+ toJSON (ColFunction txt cols) = A.object [+ "colOp" .= T.pack "fun",+ "function" .= txt,+ "args" .= (toJSON <$> cols)]+ toJSON (ColLit _ cell) = A.object [+ "colOp" .= T.pack "literal",+ "lit" .= toJSON cell]+ toJSON (ColStruct v) =+ let fun (TransformField fn colOp) =+ A.object ["name" .= T.pack (show fn), "op" .= toJSON colOp]+ in A.Array $ fun <$> v++-- instance A.ToJSON AggTransform where+-- toJSON (OpaqueAggTransform so) = A.object [+-- "aggOpaqueTrans" .= toJSON so+-- ]++instance A.ToJSON UdafApplication where+ toJSON Algebraic = toJSON (T.pack "algebraic")+ toJSON Complete = toJSON (T.pack "complete")++instance A.ToJSON AggField where+ toJSON (AggField fn aggOp) =+ A.object ["name" .= show' fn, "op" .= toJSON aggOp]++instance A.ToJSON AggOp where+ toJSON (AggUdaf ua ucn fp) = A.object [+ "aggOp" .= T.pack "udaf",+ "udafApplication" .= toJSON ua,+ "className" .= ucn,+ "field" .= toJSON fp]+ toJSON (AggFunction sfn v) = A.object [+ "aggOp" .= toJSON (T.pack "function"),+ "functionName" .= toJSON sfn,+ "fields" .= toJSON (V.toList v)]+ toJSON (AggStruct v) = toJSON (V.toList v)++_hashUpdateJson :: SHA.Ctx -> A.Value -> SHA.Ctx+_hashUpdateJson ctx val = SHA.update ctx bs where+ bs = BS.concat . LBS.toChunks . encodeDeterministicPretty $ val
+ src/Spark/Core/Internal/OpStructures.hs view
@@ -0,0 +1,296 @@+{-|+A description of the operations that can be performed on+nodes and columns.+-}+module Spark.Core.Internal.OpStructures where++import Data.Text as T+import Data.Aeson(Value, Value(Null), FromJSON, ToJSON, toJSON)+import Data.Aeson.Types(typeMismatch)+import qualified Data.Aeson as A+import Data.Vector(Vector)++import Spark.Core.StructuresInternal+import Spark.Core.Internal.TypesStructures(DataType, SQLType, SQLType(unSQLType))++{-| The name of a SQL function.++It is one of the predefined SQL functions available in Spark.+-}+type SqlFunctionName = T.Text++{-| The classpath of a UDAF.+-}+type UdafClassName = T.Text++{-| The name of an operator defined in Karps.+-}+type OperatorName = T.Text++{-| A path in the Hadoop File System (HDFS).++These paths are usually not created by the user directly.+-}+data HdfsPath = HdfsPath Text deriving (Eq, Show, Ord)++{-| A stamp that defines some notion of uniqueness of the data source.++The general contract is that:+ - stamps can be extracted fast (no need to scan the whole dataset)+ - if the data gets changed, the stamp will change.++Stamps are used for performing aggressing operation caching, so it is better+to conservatively update stamps if one is unsure about the freshness of the+dataset. For regular files, stamps are computed using the file system time+stamps.+-}+data DataInputStamp = DataInputStamp Text deriving (Eq, Show)+++{-| The invariant respected by a transform.++Depending on the value of the invariant, different optimizations+may be available.+-}+data TransformInvariant =+ -- | This operator has no special property. It may depend on+ -- the partitioning layout, the number of partitions, the order+ -- of elements in the partitions, etc.+ -- This sort of operator is unwelcome in Karps...+ Opaque+ -- | This operator respects the canonical partition order, but may+ -- not have the same number of elements.+ -- For example, this could be a flatMap on an RDD (filter, etc.).+ -- This operator can be used locally with the signature a -> [a]+ | PartitioningInvariant+ -- | The strongest invariant. It respects the canonical partition order+ -- and it outputs the same number of elements.+ -- This is typically a map.+ -- This operator can be used locally with the signature a -> a+ | DirectPartitioningInvariant+++-- | The dynamic value of locality.+-- There is still a tag on it, but it can be easily dropped.+data Locality =+ -- | The data associated to this node is local. It can be materialized+ -- and accessed by the user.+ Local+ -- | The data associated to this node is distributed or not accessible+ -- locally. It cannot be accessed by the user.+ | Distributed deriving (Show, Eq)++-- ********* PHYSICAL OPERATORS ***********+-- These structures declare some operations that correspond to operations found+-- in Spark itself, or in the surrounding libraries.++-- | An operator defined by default in the release of Karps.+-- All other physical operators can be converted to a standard operators.+data StandardOperator = StandardOperator {+ soName :: !OperatorName,+ soOutputType :: !DataType,+ soExtra :: !Value+} deriving (Eq, Show)++-- | A scala method of a singleton object.+data ScalaStaticFunctionApplication = ScalaStaticFunctionApplication {+ sfaObjectName :: !T.Text,+ sfaMethodName :: !T.Text+ -- TODO add the input and output types?+}+++-- | The different kinds of column operations that are understood by the+-- backend.+--+-- These operations describe the physical operations on columns as supported+-- by Spark SQL. They can operate on column -> column, column -> row, row->row.+-- Of course, not all operators are valid for each configuration.+data ColOp =+ -- | A projection onto a single column+ -- An extraction is always direct.+ ColExtraction !FieldPath+ -- | A function of other columns.+ -- In this case, the other columns may matter+ -- TODO(kps) add if this function is partition invariant.+ -- It should be the case most of the time.+ | ColFunction !SqlFunctionName !(Vector ColOp)+ -- | A constant defined for each element.+ -- The type should be the same as for the column+ -- A literal is always direct+ | ColLit !DataType !Value+ -- | A structure.+ | ColStruct !(Vector TransformField)+ deriving (Eq, Show)++-- | A field in a structure.+data TransformField = TransformField {+ tfName :: !FieldName,+ tfValue :: !ColOp+} deriving (Eq, Show)++-- | The content of a structured transform.+data StructuredTransform =+ InnerOp !ColOp+ | InnerStruct !(Vector TransformField)+ deriving (Eq, Show)++{-| When applying a UDAF, determines if it should only perform the algebraic+portion of the UDAF (initialize+update+merge), or if it also performs the final,+non-algebraic step.+-}+data UdafApplication = Algebraic | Complete deriving (Eq, Show)++data AggOp =+ -- The name of the UDAF and the field path to apply it onto.+ AggUdaf !UdafApplication !UdafClassName !FieldPath+ -- A column function that can be applied (sum, max, etc.)+ | AggFunction !SqlFunctionName !(Vector FieldPath)+ | AggStruct !(Vector AggField)+ deriving (Eq, Show)++{-| A field in the resulting aggregation transform.+-}+data AggField = AggField {+ afName :: !FieldName,+ afValue :: !AggOp+} deriving (Eq, Show)++{-|+-}+data AggTransform =+ OpaqueAggTransform !StandardOperator+ | InnerAggOp !AggOp deriving (Eq, Show)++{-| The representation of a semi-group law in Spark.++This is the basic law used in universal aggregators. It is a function on+observables that must respect the following laws:++f :: X -> X -> X+commutative+associative++A neutral element is not required for the semi-group laws. However, if used in+the context of a universal aggregator, such an element implicitly exists and+corresponds to the empty dataset.+-}+data SemiGroupOperator =+ -- | A standard operator that happens to respect the semi-group laws.+ OpaqueSemiGroupLaw !StandardOperator+ -- | The merging portion of a UDAF+ | UdafSemiGroupOperator !UdafClassName+ -- | A SQL operator that happens to respect the semi-group laws.+ | ColumnSemiGroupLaw !SqlFunctionName deriving (Eq, Show)++-- ********* DATASET OPERATORS ************+-- These describe Dataset -> Dataset transforms.+++data DatasetTransformDesc =+ DSScalaStaticFunction !ScalaStaticFunctionApplication+ | DSStructuredTransform !ColOp+ | DSOperator !StandardOperator+++-- ****** OBSERVABLE OPERATORS *******+-- These operators describe Observable -> Observable transforms++-- **** AGGREGATION OPERATORS *****+-- The different types of aggregators++-- The low-level description of a+-- The name of the aggregator is the name of the+-- Dataset -> Local data transform+data UniversalAggregatorOp = UniversalAggregatorOp {+ uaoMergeType :: !DataType,+ uaoInitialOuter :: !AggTransform,+ uaoMergeBuffer :: !SemiGroupOperator+} deriving (Eq, Show)+++data NodeOp2 =+ -- empty -> local+ NodeLocalLiteral !DataType !Value+ -- empty -> distributed+ | NodeDistributedLiteral !DataType !(Vector Value)+ -- distributed -> local+ | NodeStructuredAggregation !AggOp !(Maybe UniversalAggregatorOp)+ -- distributed -> distributed or local -> local+ | NodeStructuredTransform2 !Locality !ColOp+ -- [distributed, local] -> [local, distributed] opaque+ | NodeOpaqueTransform !Locality StandardOperator+ deriving (Eq, Show)++{-| A pointer to a node that is assumed to be already computed.+-}+data Pointer = Pointer {+ pointerComputation :: !ComputationID,+ pointerPath :: !NodePath+} deriving (Eq, Show)++{-+A node operation.+A description of all the operations between nodes.+These are the low-level, physical operations that Spark implements.++Each node operation is associated with:+ - a locality+ - an operation name (implicit or explicit)+ - a data type+ - a representation in JSON++Additionally, some operations are associated with algebraic invariants+to enable programmatic transformations.+-}+-- TODO: way too many different ops. Restructure into a few fundamental ops with+-- options.+data NodeOp =+ -- | An operation between local nodes: [Observable] -> Observable+ NodeLocalOp StandardOperator+ -- | An observable literal+ | NodeLocalLit !DataType !Value+ -- | A special join that broadcasts a value along a dataset.+ | NodeBroadcastJoin+ -- | Some aggregator that does not respect any particular invariant.+ | NodeOpaqueAggregator StandardOperator+ -- It implicicty expects a dataframe with 2 fields:+ -- - the first field is used as a key+ -- - the second field is passed to the reducer+ | NodeGroupedReduction !AggOp+ | NodeReduction !AggTransform+ -- TODO: remove these+ -- | A universal aggregator.+ | NodeAggregatorReduction UniversalAggregatorOp+ | NodeAggregatorLocalReduction UniversalAggregatorOp+ -- | A structured transform, performed either on a local node or a+ -- distributed node.+ | NodeStructuredTransform !ColOp+ -- | A distributed dataset (with no partition information)+ | NodeDistributedLit !DataType !(Vector Value)+ -- | An opaque distributed operator.+ | NodeDistributedOp StandardOperator+ | NodePointer Pointer+ deriving (Eq, Show)++-- | Makes a standard operator with no extra value+makeOperator :: T.Text -> SQLType a -> StandardOperator+makeOperator txt sqlt =+ StandardOperator {+ soName = txt,+ soOutputType = unSQLType sqlt,+ soExtra = Null }++instance ToJSON HdfsPath where+ toJSON (HdfsPath p) = toJSON p++instance ToJSON DataInputStamp where+ toJSON (DataInputStamp p) = toJSON p++instance FromJSON HdfsPath where+ parseJSON (A.String p) = return (HdfsPath p)+ parseJSON x = typeMismatch "HdfsPath" x++instance FromJSON DataInputStamp where+ parseJSON (A.String p) = return (DataInputStamp p)+ parseJSON x = typeMismatch "DataInputStamp" x
+ src/Spark/Core/Internal/Paths.hs view
@@ -0,0 +1,184 @@+{-# OPTIONS_GHC -fno-warn-orphans #-}+{-# LANGUAGE TypeSynonymInstances #-}+{-# LANGUAGE FlexibleInstances #-}+{-# LANGUAGE MultiParamTypeClasses #-}+{-# LANGUAGE ScopedTypeVariables #-}+{-# LANGUAGE OverloadedStrings #-}+{-# LANGUAGE FlexibleContexts #-}++module Spark.Core.Internal.Paths(+ HasNodeName(..),+ PathEdge(..),+ computePaths,+ assignPaths',+ -- For testing:+ Scopes,+ ParentSplit(..),+ mergeScopes,+ gatherPaths,+ iGetScopes0,+) where++import qualified Data.Map.Strict as M+import qualified Data.Set as S+import qualified Data.Vector as V+import Data.List(sort)+import Data.Maybe(fromMaybe, catMaybes)+import Data.Foldable(foldr', foldl', toList)+import Formatting++import Spark.Core.Try+import Spark.Core.Internal.DAGStructures+import Spark.Core.Internal.ComputeDag+import Spark.Core.StructuresInternal++class HasNodeName v where+ -- Retrieves the name of the node+ getNodeName :: v -> NodeName+ -- Assigns a path to the node+ assignPath :: v -> NodePath -> v++{-| The types of edges for the calculation of paths.+ - same level parent -> the node should have the same prefix as its parents+ - inner edge -> the parent defines the scope of this node+ -}+data PathEdge = SameLevelEdge | InnerEdge deriving (Show, Eq)++-- Assigns paths in a graph.+--+computePaths :: (HasNodeName v) =>+ ComputeDag v PathEdge -> Try (M.Map VertexId NodePath)+computePaths cd =+ let nodecg = mapVertexData getNodeName cd+ in _computePaths nodecg++assignPaths' :: (HasNodeName v) =>+ M.Map VertexId NodePath -> ComputeDag v e -> ComputeDag v e+assignPaths' m cd =+ let f vx =+ let old = NodePath . V.singleton $ getNodeName (vertexData vx)+ new = M.findWithDefault old (vertexId vx) m+ in assignPath (vertexData vx) new+ in mapVertices f cd++-- The main function to perform the pass assignments.+-- It starts from the graph of dependencies and from the local name info,+-- and computes the complete paths (if possible), starting from the fringe.+_computePaths :: ComputeDag NodeName PathEdge -> Try (M.Map VertexId NodePath)+_computePaths cg =+ let+ scopes = iGetScopes0 (toList . cdOutputs $ cg) (_splitParents' (cdEdges cg))+ paths = gatherPaths scopes+ nodeNames = M.fromList [(vertexId vx, vertexData vx)| vx <- toList . cdVertices $ cg]+ lookup' nid = M.lookup nid nodeNames+ f :: VertexId -> [[VertexId]] -> Try NodePath+ f nid ls = case ls of+ [l] ->+ return . NodePath . V.fromList . catMaybes $ lookup' <$> (l ++ [nid])+ x ->+ tryError $ sformat ("Node has too many paths: node="%shown%" discovered paths ="%shown) nid x+ nodePaths = M.traverseWithKey f paths+ in nodePaths++-- (private)+-- The top-level scope may not have an ID associated to it+type Scopes = M.Map (Maybe VertexId) (S.Set VertexId)+++-- (internal)+-- The separation of parents into logical and inner parents+data ParentSplit a = ParentSplit {+ psLogical :: ![Vertex a],+ psInner :: ![Vertex a]+} deriving (Show)++_lookupOrEmpty :: Scopes -> Maybe VertexId -> [VertexId]+_lookupOrEmpty scopes mnid =+ S.toList $ fromMaybe S.empty (M.lookup mnid scopes)++mergeScopes :: Scopes -> Scopes -> Scopes+mergeScopes = M.unionWith S.union++_singleScope :: Maybe VertexId -> VertexId -> Scopes+_singleScope mKey nid = M.singleton mKey (S.singleton nid)++-- For each node, finds the one, or more than one if possible, path(s)+-- from the root to the node (which is itself not included at the end)+-- The gathering of paths may not be exaustive.+gatherPaths :: Scopes -> M.Map VertexId [[VertexId]]+gatherPaths scopes = M.map sort $ _gatherPaths0 scopes start where+ start = _lookupOrEmpty scopes Nothing++_gatherPaths0 :: Scopes -> [VertexId] -> M.Map VertexId [[VertexId]]+_gatherPaths0 _ [] = M.empty+_gatherPaths0 scopes (nid : t) =+ let+ inner = _lookupOrEmpty scopes (Just nid)+ innerPaths = _gatherPaths0 scopes inner+ innerWithHead = M.map (\l -> (nid : ) <$> l) innerPaths+ thisPaths = M.singleton nid [[]]+ innerPaths2 = M.unionWith (++) innerWithHead thisPaths+ in M.unionWith (++) innerPaths2 (_gatherPaths0 scopes t)+++iGetScopes0 :: forall a. (Show a) =>+ [Vertex a] ->+ (Vertex a -> ParentSplit a) ->+ Scopes+iGetScopes0 [] _splitter = M.empty+iGetScopes0 (h : t) splitter =+ let+ startScope = _singleScope Nothing (vertexId h)+ folder :: Scopes -> Vertex a -> Scopes+ folder current un =+ if M.member (Just (vertexId un)) current then+ current+ else+ let split = _getScopes' splitter Nothing S.empty un current+ in mergeScopes split current+ -- Important here to use a left folder, as we want to start with the head+ -- and move down the list.+ in foldl' folder startScope (h : t)++_splitParents' :: AdjacencyMap v PathEdge -> Vertex v -> ParentSplit v+_splitParents' m vx =+ let ves = V.toList $ M.findWithDefault V.empty (vertexId vx) m+ scope = [veEndVertex ve | ve <- ves, edgeData (veEdge ve) == SameLevelEdge]+ parents' = [veEndVertex ve | ve <- ves, edgeData (veEdge ve) == InnerEdge]+ in ParentSplit { psLogical = scope, psInner = parents' }+++-- TODO(kps) this recursive code is most probably going to explode for deep stacks+_getScopes' :: forall a. (Show a) =>+ (Vertex a -> ParentSplit a) -> -- The expansion of a node into logical and inner nodes+ Maybe VertexId -> -- the current parent (if any)+ S.Set VertexId -> -- the current boundary to respect+ Vertex a -> -- the current node to expand+ Scopes -> -- the scopes seen so far+ Scopes+_getScopes' splitter mScopeId boundary un scopes =+ if S.member (vertexId un) boundary then+ scopes+ else+ let+ split = splitter un+ logParents = psLogical split+ innerParents = psInner split+ -- A fold on the parents+ parF :: Vertex a -> Scopes -> Scopes+ parF =+ -- Same boundary and parent, but update the scopes+ _getScopes' splitter mScopeId boundary+ scopesPar = foldr' parF scopes logParents+ -- Now work on the inner nodes:+ vid = vertexId un+ boundary' = S.fromList (vertexId <$> logParents)+ inF :: Vertex a -> Scopes -> Scopes+ inF =+ -- parent is current, boundary is current logical+ _getScopes' splitter (Just vid) boundary'+ scopesIn = foldr' inF scopesPar innerParents+ scopesFinal = scopesIn+ `mergeScopes` _singleScope mScopeId vid+ `mergeScopes` M.singleton (Just vid) S.empty+ in scopesFinal
+ src/Spark/Core/Internal/PathsUntyped.hs view
@@ -0,0 +1,119 @@+{-# OPTIONS_GHC -fno-warn-orphans #-}+{-# LANGUAGE MultiParamTypeClasses #-}+{-# LANGUAGE TypeSynonymInstances #-}+{-# LANGUAGE FlexibleInstances #-}+{-# LANGUAGE FlexibleContexts #-}+{-# LANGUAGE OverloadedStrings #-}++module Spark.Core.Internal.PathsUntyped(+ assignPathsUntyped,+ tieNodes+) where++import qualified Data.Vector as V+import qualified Data.Map.Strict as M+import Data.Maybe(fromMaybe)+import Data.Foldable(toList)+import Data.List(nub)+import Control.Arrow((&&&))+import Formatting+import Control.Monad.Identity++import Spark.Core.Internal.DAGStructures+import Spark.Core.Internal.DAGFunctions+import Spark.Core.Internal.ComputeDag+import Spark.Core.Internal.DatasetStructures+import Spark.Core.Internal.DatasetFunctions+import Spark.Core.Internal.Paths+import Spark.Core.Internal.Utilities+import Spark.Core.Try+import Spark.Core.StructuresInternal(unNodeId)++instance GraphVertexOperations UntypedNode where+ vertexToId = VertexId . unNodeId . nodeId+ expandVertexAsVertices n =+ nodeParents n+ ++ fromMaybe [] (nodeLogicalParents n)+ ++ nodeLogicalDependencies n++instance GraphOperations UntypedNode NodeEdge where+ expandVertex n =+ -- The logical parents are more important than the parents+ let+ -- If the logical parents are not specified, the logical parents are the+ -- direct parents.+ scopeNodes = fromMaybe (nodeParents n) (nodeLogicalParents n)+ loParents = [(ScopeEdge, v) | v <- scopeNodes]+ -- The direct parents. They may overload with the scoping parents, but+ -- this will be checked during the name analysis.+ parents' = (const (DataStructureEdge ParentEdge) &&& id) <$> nodeParents n+ loDeps = (const (DataStructureEdge LogicalEdge) &&& id) <$> nodeLogicalDependencies n+ in loParents ++ parents' ++ loDeps++instance HasNodeName UntypedNode where+ getNodeName = nodeName+ assignPath n p = updateNode n $ \n' -> n' { _cnPath = p }+++-- Stitches the nodes together to make sure that the edges in the graph also+-- correspond to the dependencies in the nodes themselves.+-- This does not update the nodeIds+-- This must happen before the pruning is performed, otherwise the node IDs will+-- not match.+tieNodes :: ComputeDag UntypedNode StructureEdge -> ComputeDag UntypedNode StructureEdge+tieNodes cd =+ let g = computeGraphToGraph cd+ f :: UntypedNode -> [(UntypedNode, StructureEdge)] -> Identity UntypedNode+ f v l =+ let parents' = V.fromList [n | (n, e) <- l, e == ParentEdge]+ logDeps = V.fromList [n | (n, e) <- l, e == LogicalEdge]+ res = updateNode v $ \n -> n {+ _cnParents = parents',+ _cnLogicalDeps = logDeps,+ _cnLogicalParents = Nothing }+ in return res+ g2 = runIdentity $ graphMapVertices g f+ in graphToComputeGraph g2++-- Assigs the paths, and drops the scoping edges.+assignPathsUntyped :: (HasCallStack) =>+ ComputeDag UntypedNode NodeEdge -> Try (ComputeDag UntypedNode StructureEdge)+assignPathsUntyped cd = do+ let pathCGraph = _getPathCDag cd+ paths <- computePaths pathCGraph+ let g = computeGraphToGraph $ assignPaths' paths cd+ let f ScopeEdge = []+ f (DataStructureEdge x) = [x]+ let g' = graphFlatMapEdges g f+ return $ graphToComputeGraph g'+++-- transforms node edges into path edges+_cleanEdges :: (HasCallStack) => [VertexEdge NodeEdge v] -> [VertexEdge PathEdge v]+_cleanEdges [] = []+_cleanEdges (h : t) =+ let vid = vertexId (veEndVertex h)+ others = [ve | ve <- t, (vertexId . veEndVertex $ ve) /= vid]+ sames = [ve | ve <- t, (vertexId . veEndVertex $ ve) == vid]+ rest = _cleanEdges others+ e = veEdge h+ -- If there multiple edges between nodes, they are dropped.+ -- This distinction is not required for names.+ eData = nub $ edgeData . veEdge <$> (h : sames)+ eData' = case eData of+ [DataStructureEdge ParentEdge] -> Just InnerEdge+ [DataStructureEdge ParentEdge, ScopeEdge] -> Just SameLevelEdge+ [ScopeEdge, DataStructureEdge ParentEdge] -> Just SameLevelEdge+ [ScopeEdge] -> Just SameLevelEdge+ [DataStructureEdge LogicalEdge] -> Nothing+ l -> failure (sformat ("Could not understand combination "%shown) l)+ res = case eData' of+ Just v -> (h { veEdge = e { edgeData = v } }) : rest+ Nothing -> rest+ in res+++_getPathCDag :: (HasCallStack) => ComputeDag v NodeEdge -> ComputeDag v PathEdge+_getPathCDag cd =+ let adj' = M.map (V.fromList . _cleanEdges . toList) (cdEdges cd)+ in cd { cdEdges = adj' }
+ src/Spark/Core/Internal/Projections.hs view
@@ -0,0 +1,335 @@+{-# LANGUAGE ScopedTypeVariables #-}+{-# LANGUAGE MultiParamTypeClasses #-}+{-# LANGUAGE FlexibleInstances #-}+{-# LANGUAGE TypeFamilies #-}+{-# LANGUAGE OverloadedStrings #-}+{-# LANGUAGE FlexibleContexts #-}+{-# LANGUAGE FunctionalDependencies #-}+{-# LANGUAGE RankNTypes #-}+-- {-# LANGUAGE UndecidableInstances #-}++-- TODO(kps): this module stretches my understanding of Haskell.+-- There is probably better than that.++{-| Defines some projections operations over dataframes, observables, and+columns. This allows users for a fairly natural manipulation of+data.++-}+module Spark.Core.Internal.Projections(+ ProjectReturn,+ Project,+ (//),+ (/-),+ _1,+ _2,+ -- * Developer functions+ StaticColProjection(..),+ DynamicColProjection,+ unsafeStaticProjection,+ dynamicProjection,+) where++import qualified Data.Text as T+import qualified Data.Vector as V+import Data.Maybe(fromMaybe)+import Formatting+import Data.Text(Text)++import Spark.Core.Try+import Spark.Core.StructuresInternal+import Spark.Core.Internal.TypesStructures+import Spark.Core.Internal.ColumnFunctions+import Spark.Core.Internal.ColumnStructures+import Spark.Core.Internal.DatasetFunctions+import Spark.Core.Internal.DatasetStructures+import Spark.Core.Internal.Utilities+++{-| The class of static projections that are guaranteed to succeed+by using the type system.++from is the type of the dataset (which is also a typed dataset)+to is the type of the final column.+-}+data StaticColProjection from to = StaticColProjection {+ _staticProj :: SQLType from -> Try (FieldPath, SQLType to)+}++{-| The class of projections that require some runtime introspection+to confirm that the projection is valid.+-}+data DynamicColProjection = DynamicColProjection {+ -- The start type is irrelevant.+ _dynProjTry :: DataType -> Try (FieldPath, DataType)+}++-- TODO: use type literal+data FixedProjection1 = FixedProjection1+data FixedProjection2 = FixedProjection2++{-| The operation of extraction from a Spark object to another+object.+-}+class Projection from proj to | from proj -> to where+ _performProjection :: from -> proj -> to++{-| The projector operation.++This is the general projection operation in Spark. It lets you extract columns+from datasets or dataframes, or sub-observables from observables.++TODO(kps) put an example here.+-}+(//) :: forall from proj. Project from proj => from -> proj -> ProjectReturn from proj+(//) = _performProject+-- (//) :: forall from proj to. Projection from proj to => from -> proj -> to+-- (//) = _performProjection++{-| The projector operation for string.++This is the general projection operation in Spark. It lets you extract columns+from datasets or dataframes, or sub-observables from observables.++Because of a Haskell limitation, this operator is different for strings.++TODO(kps) put an example here.+-}+(/-) :: forall from. Project from Text => from -> Text -> ProjectReturn from Text+(/-) = _performProject+++type family ProjectReturn from proj where+ ProjectReturn DataFrame DynamicColProjection = DynColumn+ ProjectReturn DataFrame (StaticColProjection from to) = DynColumn+ ProjectReturn DataFrame Text = DynColumn+ ProjectReturn DynColumn DynamicColProjection = DynColumn+ ProjectReturn DynColumn Text = DynColumn+ ProjectReturn (Dataset (x1, x2)) FixedProjection1 = Column (x1, x2) x1+ ProjectReturn (Dataset (x1, x2)) FixedProjection2 = Column (x1, x2) x2+ ProjectReturn (Dataset x) DynamicColProjection = DynColumn+ -- TODO: not sure how to force x ~ x'+ ProjectReturn (Dataset x) (StaticColProjection x y) = Column x y+ ProjectReturn (Dataset x) Text = DynColumn+++class MyString x where+ convertToText :: x -> Text++instance (a ~ Text) => MyString a where+ convertToText = id++class Project from proj where+ _performProject :: from -> proj -> ProjectReturn from proj++instance Project DynColumn DynamicColProjection where+ _performProject = projectDColDCol++instance Project DataFrame DynamicColProjection where+ _performProject = projectDFDyn++instance forall a b. Project DataFrame (StaticColProjection a b) where+ _performProject df proj = projectDFDyn df (colStaticProjToDynProj proj)++instance forall a b. Project (Dataset a) (StaticColProjection a b) where+ _performProject = projectDsCol++instance forall a. Project (Dataset a) DynamicColProjection where+ _performProject = projectDSDyn++instance Project DynColumn Text where+ _performProject dc s =+ let s' = T.unpack $ convertToText s+ in _performProjection dc (stringToDynColProj s')++instance Project DataFrame Text where+ _performProject df s =+ let s' = T.unpack $ convertToText s+ in projectDFDyn df (stringToDynColProj s')++instance Project (Dataset a) Text where+ _performProject ds s =+ let s' = T.unpack $ convertToText s+ in projectDSDyn ds (stringToDynColProj s')++instance forall x1 x2. Project (Dataset (x1, x2)) FixedProjection1 where+ _performProject ds _ = projectDsCol ds (StaticColProjection (_projectNthField 1))++instance forall x1 x2. Project (Dataset (x1, x2)) FixedProjection2 where+ _performProject ds _ = projectDsCol ds (StaticColProjection (_projectNthField 2))++-- data Foo+-- data Bar+--+-- test =+-- let dyn1 = undefined :: DynColumn+-- pdyn1 = undefined :: DynamicColProjection+-- p = undefined :: StaticColProjection Foo Bar+-- ds1 = undefined :: Dataset Foo+-- foo = undefined :: Foo+-- df1 = undefined :: DataFrame+-- dyn2 = dyn1 // pdyn1+-- dyn3 = dyn1/-"ab"/-"cd"+-- dyn4 = dyn1 // pdyn1 // pdyn1+-- cdyn1 = df1/-"ab"//pdyn1+-- ds2 = ds1 // p+-- -- dyn4 = dyn1 /// foo+-- in ds2++-- instance Project++-- dataset -> static projection -> column+instance forall a to. Projection (Dataset a) (StaticColProjection a to) (Column a to) where+ _performProjection = projectDsCol++-- dataset -> dynamic projection -> DynColumn+instance forall a. Projection (Dataset a) DynamicColProjection DynColumn where+ _performProjection = projectDSDyn++-- dataset -> string -> DynColumn+instance forall a . Projection (Dataset a) String DynColumn where+ _performProjection ds s = projectDSDyn ds (stringToDynColProj s)++-- dataframe -> dynamic projection -> dyncolumn+instance Projection DataFrame DynamicColProjection DynColumn where+ _performProjection = projectDFDyn++-- dataframe -> static projection -> dyncolumn+-- This is a relaxation as we could return Try (Column to) intead.+-- It makes more sense from an API perspective to just return a dynamic result.+instance forall a to. Projection DataFrame (StaticColProjection a to) DynColumn where+ _performProjection df proj = projectDFDyn df (colStaticProjToDynProj proj)++-- dataframe -> string -> dyncolumn+instance Projection DataFrame String DynColumn where+ _performProjection df s = projectDFDyn df (stringToDynColProj s)++-- column -> static projection -> column+instance forall ref a to. Projection (Column ref a) (StaticColProjection a to) (Column ref to) where+ _performProjection = projectColCol+++-- dyncolumn -> dynamic projection -> dyncolumn+instance Projection DynColumn DynamicColProjection DynColumn where+ _performProjection = projectDColDCol++instance forall a to. Projection DynColumn (StaticColProjection a to) DynColumn where+ _performProjection dc proj = projectDColDCol dc (colStaticProjToDynProj proj)++-- dyncolumn -> string -> dyncolumn+instance Projection DynColumn String DynColumn where+ _performProjection dc s = _performProjection dc (stringToDynColProj s)+++-- Tuples++_2 :: FixedProjection2+_2 = FixedProjection2++_1 :: FixedProjection1+_1 = FixedProjection1+++{-| Lets the users define their own static projections.++Throws an error if the type cannot be found, so should be used with caution.++String has to be used because of type inferrence issues+-}+unsafeStaticProjection :: forall from to. (HasCallStack) =>+ SQLType from -- ^ The start type+ -> String -- ^ The name of a field assumed to be found in the start type.+ -- This only has to be valid for Spark purposes, not+ -- internal Haskell representation.+ -> StaticColProjection from to+unsafeStaticProjection sqlt field =+ let+ f = forceRight . fieldPath . T.pack $ field+ sqlt' = fromMaybe+ (failure $ sformat ("unsafeStaticProjection: Cannot find the field "%sh%" in type "%sh) field sqlt)+ (extractPathUnsafe sqlt f)+ f2 inSqlt = if inSqlt == sqlt+ then pure (f, sqlt')+ else tryError $ "Expected type " <> show' sqlt <> " but received type " <> show' inSqlt+ in StaticColProjection f2+++-- Returns a projection from a path (even if invalid data)+-- TODO: what is the difference with the function below??+dynamicProjection :: String -> DynamicColProjection+dynamicProjection txt = case fieldPath (T.pack txt) of+ Left msg -> DynamicColProjection $ \_ ->+ tryError $ sformat ("dynamicProjection: invalid syntax for path "%shown%": "%shown) txt msg+ Right fpath -> pathToDynColProj fpath++{-| Given a string that contains a name or a path, builds a dynamic column+projection.+-}+stringToDynColProj :: String -> DynamicColProjection+stringToDynColProj s =+ let+ fun dt =+ case fieldPath (T.pack s) of+ Right fp -> _dynProjTry (pathToDynColProj fp) dt+ Left msg -> tryError (T.pack msg)+ in DynamicColProjection fun++pathToDynColProj :: FieldPath -> DynamicColProjection+pathToDynColProj fpath =+ let+ fun dt = case extractPathUnsafe (SQLType dt) fpath of+ Just (SQLType dt') -> pure (fpath, dt') -- TODO(kps) I have a doubt+ Nothing ->+ tryError $ sformat ("unsafeStaticProjection: Cannot find the field "%shown%" in type "%shown) fpath dt+ in DynamicColProjection fun+++-- | Converts a static project to a dynamic projector.+colStaticProjToDynProj :: forall from to. StaticColProjection from to -> DynamicColProjection+colStaticProjToDynProj (StaticColProjection fProj) =+ DynamicColProjection $ \dt -> do+ (fp, sqlt) <- fProj (SQLType dt)+ let dt' = unSQLType sqlt+ return (fp, dt')++-- ****** Functions that perform projections *******++-- TODO: take a compute node instead+projectDSDyn :: Dataset from -> DynamicColProjection -> DynColumn+projectDSDyn ds proj = do+ (p, dt) <- _dynProjTry proj (unSQLType . nodeType $ ds)+ colExtraction ds dt p++projectDFDyn :: DataFrame -> DynamicColProjection -> DynColumn+projectDFDyn df proj = do+ node <- df+ projectDSDyn node proj++projectDsCol :: (HasCallStack) => Dataset from -> StaticColProjection from to -> Column from to+projectDsCol ds proj = let (p, sqlt) = forceRight $ _staticProj proj (nodeType ds) in+ iEmptyCol ds sqlt p++projectColCol :: Column ref from -> StaticColProjection from to -> Column ref to+projectColCol c (StaticColProjection fProj) =+ let (fp, SQLType dt) = forceRight $ fProj (colType c)+ in unsafeProjectCol c fp dt+++projectColDynCol :: ColumnData ref a -> DynamicColProjection -> DynColumn+projectColDynCol cd proj =+ _dynProjTry proj (_cType cd) <&> uncurry (unsafeProjectCol . dropColReference $ cd)++projectDColDCol :: DynColumn -> DynamicColProjection -> DynColumn+projectDColDCol c proj = do+ cd <- c+ projectColDynCol cd proj++_projectNthField :: Int -> SQLType a -> Try (FieldPath, SQLType b)+_projectNthField n (SQLType (StrictType (Struct (StructType v)))) =+ let extractNth :: Int -> [StructField] -> Try (FieldPath, SQLType b)+ extractNth 1 (f1 : _) =+ pure (FieldPath . V.singleton . structFieldName $ f1, SQLType . structFieldType $ f1)+ extractNth n' (_ : t) | n > 1 = extractNth (n'-1) t+ extractNth n' l = tryError $ "_projectNthField: n = "<>show' n'<>" l="<>show' l+ in extractNth n (V.toList v)+_projectNthField _ sqlt = tryError $ "_1: Expected a struct, got " <> show' sqlt
+ src/Spark/Core/Internal/Pruning.hs view
@@ -0,0 +1,92 @@+{-# LANGUAGE ScopedTypeVariables #-}+{-# LANGUAGE FlexibleContexts #-}+{-# LANGUAGE OverloadedStrings #-}++{-| Methods to prune the computation graph.+-}+module Spark.Core.Internal.Pruning(+ NodeCacheStatus(..),+ NodeCacheInfo(..),+ NodeCache,+ pruneGraph,+ pruneGraphDefault,+ emptyNodeCache+) where++import Data.HashMap.Strict as HM++import Spark.Core.StructuresInternal(NodeId, NodePath, ComputationID)+import Spark.Core.Internal.DatasetStructures(UntypedNode, StructureEdge)+import Spark.Core.Internal.DAGFunctions+import Spark.Core.Internal.DAGStructures+import Spark.Core.Internal.DatasetFunctions+import Spark.Core.Internal.OpStructures+++{-| The status of a node being computed.++On purpose, it does not store data. This is meant to be+only the control plane of the compuations.+-}+data NodeCacheStatus =+ NodeCacheRunning+ | NodeCacheError+ | NodeCacheSuccess+ deriving (Eq, Show)++{-| This structure describes the last time a node was observed by the+controller, and the state it was in.++This information is used to do smart computation pruning, by assuming+that the observables are kept by the Spark processes.+-}+data NodeCacheInfo = NodeCacheInfo {+ nciStatus :: !NodeCacheStatus,+ nciComputation :: !ComputationID,+ nciPath :: !NodePath+} deriving (Eq, Show)++type NodeCache = HM.HashMap NodeId NodeCacheInfo++emptyNodeCache :: NodeCache+emptyNodeCache = HM.empty++{-| It assumes a compute graph, NOT a dependency dag.+-}+pruneGraph :: (Show v) =>+ -- The current cache+ NodeCache ->+ (v -> NodeId) ->+ -- A function to create a node replacement+ (v -> NodeCacheInfo -> v) ->+ -- The graph+ Graph v StructureEdge ->+ Graph v StructureEdge+pruneGraph c getNodeId f g =+ -- Prune the node that we do not want+ let depGraph = reverseGraph g+ fop v = if HM.member (getNodeId v) c+ then CutChildren+ else Keep+ filtered = graphFilterVertices fop depGraph+ -- Bring back to normal flow.+ comFiltered = reverseGraph filtered+ -- Replace the nodes in the cache by place holders.+ -- This is done on the compute graph.+ repOp v = case HM.lookup (getNodeId v) c of+ Just nci -> f v nci+ Nothing -> v+ g' = graphMapVertices' repOp comFiltered+ in g'++pruneGraphDefault ::+ NodeCache -> Graph UntypedNode StructureEdge -> Graph UntypedNode StructureEdge+pruneGraphDefault c = pruneGraph c nodeId _createNodeCache++_createNodeCache :: UntypedNode -> NodeCacheInfo -> UntypedNode+_createNodeCache n nci =+ let name = "org.spark.PlaceholderCache"+ no = NodePointer (Pointer (nciComputation nci) (nciPath nci))+ n2 = emptyNodeStandard (nodeLocality n) (nodeType n) name+ `updateNodeOp` no+ in n2
+ src/Spark/Core/Internal/RowGenerics.hs view
@@ -0,0 +1,106 @@+{-# LANGUAGE PolyKinds #-}+{-# LANGUAGE TypeOperators #-}+{-# LANGUAGE DeriveAnyClass #-}+{-# LANGUAGE FlexibleContexts #-}+{-# LANGUAGE FlexibleInstances #-}+{-# LANGUAGE DefaultSignatures #-}+{-# LANGUAGE ScopedTypeVariables #-}+{-# LANGUAGE BangPatterns #-}+{-# LANGUAGE MultiParamTypeClasses #-}+++-- The generic implementation for the protocol that converts to+-- and from SQL cells.+-- Going through JSON is not recommended because of precision loss+-- for the numbers, and other issues related to numbers.+module Spark.Core.Internal.RowGenerics(+ ToSQL,+ valueToCell,+) where++import GHC.Generics+import qualified Data.Vector as V+import Data.Text(pack, Text)++import Spark.Core.Internal.RowStructures+import Spark.Core.Internal.Utilities++-- We need to differentiate between the list built for the+-- constructor and an inner object.+data CurrentBuffer =+ ConsData ![Cell]+ | BuiltCell !Cell deriving (Show)++_cellOrError :: CurrentBuffer -> Cell+_cellOrError (BuiltCell cell) = cell+_cellOrError x = let msg = "Expected built cell, received " ++ show x in+ failure (pack msg)++-- All the types that can be converted to a SQL value.+class ToSQL a where+ _valueToCell :: a -> Cell++ default _valueToCell :: (Generic a, GToSQL (Rep a)) => a -> Cell+ _valueToCell !x = _g2cell (from x)++valueToCell :: (ToSQL a) => a -> Cell+valueToCell = _valueToCell++-- class FromSQL a where+-- _cellToValue :: Cell -> Try a++instance ToSQL a => ToSQL (Maybe a) where+ _valueToCell (Just x) = _valueToCell x+ _valueToCell Nothing = Empty++instance (ToSQL a, ToSQL b) => ToSQL (a, b) where+ _valueToCell (x, y) = RowArray (V.fromList [valueToCell x, valueToCell y])++instance ToSQL Int where+ _valueToCell = IntElement++instance ToSQL Double where+ _valueToCell = DoubleElement++instance ToSQL Text where+ _valueToCell = StringElement+++class GToSQL r where+ _g2buffer :: r a -> CurrentBuffer+ _g2cell :: r a -> Cell+ _g2cell = _cellOrError . _g2buffer++instance GToSQL U1 where+ _g2buffer U1 = failure $ pack "GToSQL UI called"++-- | Constants, additional parameters and recursion of kind *+instance (GToSQL a, GToSQL b) => GToSQL (a :*: b) where+ _g2buffer (a :*: b) = case (_g2buffer a, _g2buffer b) of+ (ConsData l1, ConsData l2) -> ConsData (l1 ++ l2)+ (y1, y2) -> failure $ pack $ "GToSQL (a :*: b): Expected buffers, received " ++ show y1 ++ " and " ++ show y2++instance (GToSQL a, GToSQL b) => GToSQL (a :+: b) where+ _g2buffer (L1 x) = _g2buffer x+ _g2buffer (R1 x) = let !y = _g2buffer x in y++-- -- | Sums: encode choice between constructors+-- instance (GToSQL a) => GToSQL (M1 i c a) where+-- _g2cell !(M1 x) = let !y = _g2cell x in+-- trace ("GToSQL M1: y = " ++ show y) y++instance (GToSQL a) => GToSQL (M1 C c a) where+ _g2buffer (M1 x) = let !y = _g2buffer x in y++instance (GToSQL a) => GToSQL (M1 S c a) where+ _g2buffer (M1 x) = let !y = ConsData [_g2cell x] in y++instance (GToSQL a) => GToSQL (M1 D c a) where+ _g2buffer (M1 x) =+ case _g2buffer x of+ ConsData cs -> BuiltCell $ RowArray (V.fromList cs)+ BuiltCell cell -> BuiltCell cell++-- | Products: encode multiple arguments to constructors+instance (ToSQL a) => GToSQL (K1 i a) where+ _g2buffer (K1 x) = let !y = _valueToCell x in BuiltCell y
+ src/Spark/Core/Internal/RowGenericsFrom.hs view
@@ -0,0 +1,185 @@+{-# LANGUAGE PolyKinds #-}+{-# LANGUAGE TypeOperators #-}+{-# LANGUAGE DeriveAnyClass #-}+{-# LANGUAGE FlexibleContexts #-}+{-# LANGUAGE FlexibleInstances #-}+{-# LANGUAGE DefaultSignatures #-}+{-# LANGUAGE ScopedTypeVariables #-}+{-# LANGUAGE MultiParamTypeClasses #-}+{-# LANGUAGE OverloadedStrings #-}+++-- The generic implementation for the protocol that converts to+-- and from SQL cells.+-- Going through JSON is not recommended because of precision loss+-- for the numbers, and other issues related to numbers.+module Spark.Core.Internal.RowGenericsFrom(+ FromSQL(_cellToValue),+ TryS,+ cellToValue,+) where++import GHC.Generics+import Data.Text(Text, pack)+import Control.Applicative(liftA2)+import Control.Monad.Except+import Formatting+import qualified Data.Vector as V++import Spark.Core.Internal.RowStructures+import Spark.Core.Internal.Utilities+import Spark.Core.Internal.TypesStructuresRepr(DataTypeRepr, DataTypeElementRepr)++-- Convert a cell to a value (if possible)+cellToValue :: (FromSQL a) => Cell -> Either Text a+cellToValue = _cellToValue++type TryS = Either Text++-- Because of the way the generic decoders work,+-- an array of cell needs special treatment when it is+-- decoded as the constructor of an object. Then it should+-- be interpreted as a stateful tape, for which we read a+-- few cells (number unknown) and return some value from the+-- cells that have been consumed.+data Decode2 =+ -- A tape with some potentially remaining cells+ D2Cons ![Cell]+ -- Just a normal cell.+ | D2Normal !Cell+ deriving (Eq, Show)+++-- All the types that can be converted to a SQL value.+class FromSQL a where+ _cellToValue :: Cell -> TryS a++ default _cellToValue :: (Generic a, GFromSQL (Rep a)) => Cell -> TryS a+ _cellToValue cell = let+ x = undefined :: a+ x1r = _gFcell (from x) (D2Normal cell) :: InterResult (Decode2, Rep a a)+ x2r = snd <$> x1r+ x1t = to <$> x2r+ in _toTry x1t++-- ******** Basic instance ********++instance FromSQL a => FromSQL (Maybe a) where+ _cellToValue Empty = pure Nothing+ _cellToValue x = pure <$> _cellToValue x++instance FromSQL Int where+ _cellToValue (IntElement x) = pure x+ _cellToValue x = throwError $ sformat ("FromSQL: Decoding an int from "%shown) x++instance FromSQL Double where+ _cellToValue (DoubleElement x) = pure x+ _cellToValue x = throwError $ sformat ("FromSQL: Decoding a double from "%shown) x++instance FromSQL Text where+ _cellToValue (StringElement txt) = pure txt+ _cellToValue x = throwError $ sformat ("FromSQL: Decoding a unicode text from "%shown) x++instance FromSQL Cell where+ _cellToValue = pure++instance FromSQL Bool where+ _cellToValue (BoolElement b) = pure b+ _cellToValue x = throwError $ sformat ("FromSQL: Decoding a boolean from "%shown) x++instance FromSQL DataTypeRepr+instance FromSQL DataTypeElementRepr++instance FromSQL a => FromSQL [a] where+ _cellToValue (RowArray xs) =+ sequence (_cellToValue <$> V.toList xs)+ _cellToValue x = throwError $ sformat ("FromSQL[]: Decoding array from "%shown) x++instance (FromSQL a1, FromSQL a2) => FromSQL (a1, a2) where+ _cellToValue (RowArray xs) = case V.toList xs of+ [x1, x2] ->+ liftA2 (,) (_cellToValue x1) (_cellToValue x2)+ l -> throwError $ sformat ("FromSQL: Expected 2 elements but got "%sh) l+ _cellToValue x = throwError $ sformat ("FromSQL(,): Decoding array from "%shown) x++-- ******* GENERIC ********++-- A final message at the bottom+-- A path in the elements to get there+data FailureInfo = FailureInfo !Text ![Text] deriving (Eq, Show)++type InterResult a = Either FailureInfo a+++class GFromSQL r where+ -- An evidence about the type (in order to have info about the field names)+ -- The current stuff that has been decoded+ _gFcell :: r a -> Decode2 -> InterResult (Decode2, r a)++_toTry :: InterResult a -> TryS a+_toTry (Right x) = pure x+_toTry (Left (FailureInfo msg p)) = Left $ show' (reverse p) <> " : " <> msg++_fromTry :: TryS a -> InterResult a+_fromTry (Right x) = Right x+_fromTry (Left x) = Left $ FailureInfo x []++instance GFromSQL U1 where+ _gFcell x = failure $ pack $ "GFromSQL UI called" ++ show x++instance (GFromSQL a, GFromSQL b) => GFromSQL (a :*: b) where+ -- Switching to tape-reading mode+ _gFcell ev (D2Normal (RowArray arr)) = _gFcell ev (D2Cons (V.toList arr))+ -- Advancing into the reader+ _gFcell ev (D2Cons l) = do+ let (ev1 :*: ev2) = ev+ (d1, x1) <- _gFcell ev1 (D2Cons l)+ (d2, x2) <- _gFcell ev2 d1+ return (d2, x1 :*: x2)+ _gFcell _ x = failure $ pack ("GFromSQL (a :*: b) " ++ show x)+++instance (GFromSQL a, GFromSQL b) => GFromSQL (a :+: b) where+ _gFcell _ x = failure $ pack $ "GFromSQL (a :+: b)" ++ show x++instance (GFromSQL a, Constructor c) => GFromSQL (M1 C c a) where+ _gFcell _ (D2Cons x) = failure $ pack ("GFromSQL (M1 C c a)" ++ " FAILED CONS: " ++ show x)+ _gFcell ev (D2Normal cell) = do+ let ev' = unM1 ev+ (d, x) <- _withHint (pack (conName ev)) $ _gFcell ev' (D2Normal cell)+ return (d, M1 x)++instance (GFromSQL a, Selector c) => GFromSQL (M1 S c a) where+ _gFcell ev (D2Normal (RowArray arr)) = do+ let ev' = unM1 ev+ let l = V.toList arr+ (d, x) <- _withHint ("(1)" <> pack (selName ev)) $ _gFcell ev' (D2Cons l)+ return (d, M1 x)+ _gFcell ev d = do+ let ev' = unM1 ev+ (d', x) <- _withHint ("(2)" <> pack (selName ev)) $ _gFcell ev' d+ return (d', M1 x)++instance (GFromSQL a, Datatype c) => GFromSQL (M1 D c a) where+ _gFcell ev (z @ (D2Normal (RowArray _))) = do+ let ev' = unM1 ev+ (d, x) <- _gFcell ev' z+ return (d, M1 x)+ _gFcell _ x = failure $ pack $ "FAIL GFromSQL (M1 D c a)" ++ show x++-- | Products: encode multiple arguments to constructors+instance (FromSQL a) => GFromSQL (K1 i a) where+ -- It is just a normal cell.+ -- Read one element and move on.+ _gFcell _ (D2Cons (cell : r)) = do+ x <- _fromTry $ _cellToValue cell+ return (D2Cons r, K1 x)+ -- Just reading a normal cell, return no tape.+ _gFcell _ (D2Normal cell) = do+ x <- _fromTry $ _cellToValue cell+ return (D2Cons [], K1 x)+ _gFcell _ x = failure $ pack ("GFromSQLK FAIL " ++ show x)++_withHint :: Text -> InterResult a -> InterResult a+_withHint extra (Left (FailureInfo msg l)) = Left (FailureInfo msg (extra : l))+_withHint _ (Right x) = Right x
+ src/Spark/Core/Internal/RowStructures.hs view
@@ -0,0 +1,50 @@+module Spark.Core.Internal.RowStructures where++import Data.Aeson+import Data.Vector(Vector)+import qualified Data.Text as T++-- | The basic representation of one row of data. This is a standard type that comes out of the+-- SQL engine in Spark.++-- | An element in a Row object.+-- All objects manipulated by the Spark framework are assumed to+-- be convertible to cells.+--+-- This is usually handled by generic transforms.+data Cell =+ Empty -- To represent maybe+ | IntElement !Int+ | DoubleElement !Double+ | StringElement !T.Text+ | BoolElement !Bool+ | RowArray !(Vector Cell) deriving (Show, Eq)++-- | A Row of data: the basic data structure to transport information+-- TODO rename to rowCells+data Row = Row {+ cells :: !(Vector Cell)+ } deriving (Show, Eq)+++-- AESON INSTANCES++-- TODO(kps) add some workaround to account for the restriction of+-- JSON types:+-- int32 -> int32+-- double -> double+-- weird double -> string?+-- long/bigint -> string?++-- | Cell+instance ToJSON Cell where+ toJSON Empty = Null+ toJSON (DoubleElement d) = toJSON d+ toJSON (IntElement i) = toJSON i+ toJSON (BoolElement b) = toJSON b+ toJSON (StringElement s) = toJSON s+ toJSON (RowArray arr) = toJSON arr++-- | Row+instance ToJSON Row where+ toJSON (Row x) = toJSON x
+ src/Spark/Core/Internal/RowUtils.hs view
@@ -0,0 +1,120 @@+{-# LANGUAGE OverloadedStrings #-}++module Spark.Core.Internal.RowUtils(+ jsonToCell,+ checkCell,+ rowArray+) where++import Data.Aeson+import Data.Text(Text)+import Data.Maybe(catMaybes, listToMaybe)+import Formatting+import qualified Data.Vector as V+import qualified Data.HashMap.Strict as HM+import Data.Scientific(floatingOrInteger, toRealFloat)+import Control.Monad.Except++import Spark.Core.Internal.TypesStructures+import Spark.Core.Internal.TypesFunctions+import Spark.Core.Internal.RowStructures+import Spark.Core.StructuresInternal(FieldName(..))+import Spark.Core.Internal.Utilities++type TryCell = Either Text Cell++-- | Decodes a JSON into a row.+-- This operation requires a SQL type that describes+ -- the schema.+jsonToCell :: DataType -> Value -> Either Text Cell+jsonToCell dt v = withContext ("jsonToCell: dt="<>show' dt<>" v="<>show' v) $+ _j2Cell v dt++{-| Given a datatype, ensures that the cell has the corresponding type.+-}+checkCell :: DataType -> Cell -> Either Text Cell+checkCell dt c = case _checkCell dt c of+ Nothing -> pure c+ Just txt -> throwError txt++{-| Convenience constructor for an array of cells.+-}+rowArray :: [Cell] -> Cell+rowArray = RowArray . V.fromList+++-- Returns an error message if something wrong is found+_checkCell :: DataType -> Cell -> Maybe Text+_checkCell dt c = case (dt, c) of+ (NullableType _, Empty) -> Nothing+ (StrictType _, Empty) ->+ pure $ sformat ("Expected a strict value of type "%sh%" but no value") dt+ (StrictType sdt, x) -> _checkCell' sdt x+ (NullableType sdt, x) -> _checkCell' sdt x++-- Returns an error message if something wrong is found+_checkCell' :: StrictDataType -> Cell -> Maybe Text+_checkCell' sdt c = case (sdt, c) of+ (_, Empty) ->+ pure $ sformat ("Expected a strict value of type "%sh%" but no value") sdt+ (IntType, IntElement _) -> Nothing+ (StringType, StringElement _) -> Nothing+ (Struct (StructType fields), RowArray cells') ->+ if V.length fields == V.length cells'+ then+ let types = V.toList $ structFieldType <$> fields+ res = uncurry _checkCell <$> (types `zip` V.toList cells')+ in listToMaybe (catMaybes res)+ else+ pure $ sformat ("Struct "%sh%" has "%sh%" fields, asked to be matched with "%sh%" cells") sdt (V.length fields) (V.length cells')+ (ArrayType dt, RowArray cells') ->+ let res = uncurry _checkCell <$> (repeat dt `zip` V.toList cells')+ in listToMaybe (catMaybes res)+ (_, _) ->+ pure $ sformat ("Type "%sh%" is incompatible with cell content "%sh) sdt c+++_j2Cell :: Value -> DataType -> TryCell+_j2Cell Null (StrictType t) =+ throwError $ sformat ("_j2Cell: Expected "%shown%", got null") t+_j2Cell Null (NullableType _) = pure Empty+_j2Cell x (StrictType t) = _j2CellS x t+-- We do not express optional types at cell level. They have to be+-- encoded in the data type.+_j2Cell x (NullableType t) = _j2CellS x t+--_j2Cell x t = throwError $ sformat ("_j2Cell: Could not match value "%shown%" with type "%shown) x t++_j2CellS :: Value -> StrictDataType -> TryCell+_j2CellS (String t) StringType = pure . StringElement $ t+_j2CellS (Bool t) BoolType = pure . BoolElement $ t+_j2CellS (Array v) (ArrayType t) =+ let trys = flip _j2Cell t <$> v in+ RowArray <$> sequence trys+_j2CellS (Number s) IntType = case floatingOrInteger s :: Either Double Int of+ Left _ -> throwError $ sformat ("_j2CellS: Could not cast as int "%shown) s+ Right i -> pure (IntElement i)+_j2CellS (Number s) DoubleType = pure . DoubleElement . toRealFloat $ s+-- Normal representation as object.+_j2CellS (Object o) (Struct struct) =+ let+ o2f :: StructField -> TryCell+ o2f field =+ let nullable = isNullable $ structFieldType field+ val = HM.lookup (unFieldName $ structFieldName field) o in+ case val of+ Nothing ->+ if nullable then+ pure Empty+ else throwError $ sformat ("_j2CellS: Could not find key "%shown%" in object "%shown) field o+ Just x -> _j2Cell x (structFieldType field)+ fields = o2f <$> structFields struct+ in RowArray <$> sequence fields+-- Compact array-based representation.+_j2CellS (Array v) (Struct (StructType fields)) =+ if V.length v == V.length fields+ then+ let dts = structFieldType <$> fields+ inner = uncurry _j2Cell <$> V.zip v dts+ in RowArray <$> sequence inner+ else throwError $ sformat ("_j2CellS: Compact object format a different number of fields '"%shown%"' compared "%shown) v fields+_j2CellS x t = throwError $ sformat ("_j2CellS: Could not match value '"%shown%"' with type "%shown) x t
+ src/Spark/Core/Internal/TypesFunctions.hs view
@@ -0,0 +1,249 @@+{-# LANGUAGE OverloadedStrings #-}+{-# OPTIONS_GHC -fno-warn-orphans #-}++module Spark.Core.Internal.TypesFunctions(+ isNullable,+ iInnerStrictType,+ columnType,+ unsafeCastType,+ intType,+ arrayType,+ compatibleTypes,+ arrayType',+ frameTypeFromCol,+ colTypeFromFrame,+ canNull,+ structField,+ structType,+ structTypeFromFields,+ structTypeTuple,+ structTypeTuple',+ tupleType,+ structName,+ iSingleField,+ -- cellType,+) where++import Control.Monad.Except+import qualified Data.List.NonEmpty as N+import Control.Arrow(second)+import Data.Function(on)+import Data.List(sort, nub, sortBy)+import qualified Data.Map.Strict as M+import qualified Data.Text as T+import Data.Text(Text, intercalate)+import qualified Data.Vector as V+import Formatting+++import Spark.Core.Internal.TypesStructures+import Spark.Core.StructuresInternal+import Spark.Core.Internal.RowGenericsFrom(FromSQL(..), TryS)+import Spark.Core.Internal.Utilities+import Spark.Core.Internal.TypesStructuresRepr(DataTypeRepr, DataTypeElementRepr)+import qualified Spark.Core.Internal.TypesStructuresRepr as DTR+import Spark.Core.Try++-- Performs a cast of the type.+-- This may throw an error if the required type b is not+-- compatible with the type embedded in a.+unsafeCastType :: SQLType a -> SQLType b+-- TODO add more error checking here.+unsafeCastType (SQLType dt) = SQLType dt+++-- Given a sql type tag, returns the equivalent data type for a column or a blob+-- (internal)+columnType :: SQLType a -> DataType+columnType (SQLType dt) = dt++-- (internal)+isNullable :: DataType -> Bool+isNullable (StrictType _) = False+isNullable (NullableType _) = True++-- *** Creation of data types ***+++-- Takes a data type (assumed to be that of a column or cell) and returns the+-- corresponding dataset type.+-- This should only be used when talking to Spark.+-- All visible operations in Karps use Cell types instead.+-- TODO should it use value or _1? Both seem to be used in Spark.+frameTypeFromCol :: DataType -> StructType+frameTypeFromCol (StrictType (Struct struct)) = struct+frameTypeFromCol dt = _structFromUnfields [("value", dt)]++-- Given the structural type for a dataframe or a dataset, returns the+-- equivalent column type.+colTypeFromFrame :: StructType -> DataType+colTypeFromFrame st @ (StructType fs) = case V.toList fs of+ [StructField {+ structFieldName = fname,+ structFieldType = (StrictType dt)}] | fname == "value" ->+ StrictType dt+ _ -> StrictType (Struct st)+++-- The strict int type++compatibleTypes :: DataType -> DataType -> Bool+compatibleTypes (StrictType sdt) (StrictType sdt') = _compatibleTypesStrict sdt sdt'+compatibleTypes (NullableType sdt) (NullableType sdt') = _compatibleTypesStrict sdt sdt'+compatibleTypes _ _ = False++-- ***** INSTANCES *****++-- In the case of source introspection, datatypes may be returned.+instance FromSQL DataType where+ _cellToValue = _cellToValue >=> _sDataTypeFromRepr++_sDataTypeFromRepr :: DataTypeRepr -> TryS DataType+_sDataTypeFromRepr (DTR.DataTypeRepr l) = snd <$> _sToTreeRepr l++_sToTreeRepr :: [DataTypeElementRepr] -> TryS (Int, DataType)+_sToTreeRepr [] = throwError $ sformat "_sToTreeRepr: empty list"+_sToTreeRepr [dtr] | null (DTR.fieldPath dtr) =+ -- We are at a leaf, decode the leaf+ _decodeLeaf dtr []+_sToTreeRepr l = do+ let f dtr = case DTR.fieldPath dtr of+ [] -> []+ (h : t) -> [(h, dtr')] where dtr' = dtr { DTR.fieldPath = t }+ let hDtrt = case filter (null . DTR.fieldPath) l of+ [dtr] -> pure dtr+ _ ->+ throwError $ sformat ("_decodeList: invalid top with "%sh) l+ let withHeads = concatMap f l+ let g = myGroupBy withHeads+ let groupst = M.toList g <&> \(h, l') ->+ _sToTreeRepr l' <&> second (StructField (FieldName h))+ groups <- sequence groupst+ checkedGroups <- _packWithIndex groups+ hDtr <- hDtrt+ _decodeLeaf hDtr checkedGroups++_packWithIndex :: (Show t) => [(Int, t)] -> TryS [t]+_packWithIndex l = _check 0 $ sortBy (compare `on` fst) l++-- Checks that all the elements are indexed in order by their value.+-- It works by running a counter along each element and seeing that it is here.+_check :: (Show t) => Int -> [(Int, t)] -> TryS [t]+_check _ [] = pure []+_check n ((n', x):t) =+ if n == n'+ then (x : ) <$> _check (n+1) t+ else+ throwError $ sformat ("_check: could not match arguments at index "%sh%" for argument "%sh) n ((n', x):t)+++_decodeLeaf :: DataTypeElementRepr -> [StructField] -> TryS (Int, DataType)+_decodeLeaf dtr l = _decodeLeafStrict dtr l <&> \sdt ->+ if DTR.isNullable dtr+ then (DTR.fieldIndex dtr, NullableType sdt)+ else (DTR.fieldIndex dtr, StrictType sdt)++_decodeLeafStrict :: DataTypeElementRepr -> [StructField] -> TryS StrictDataType+-- The array type+_decodeLeafStrict dtr [sf] | DTR.typeId dtr == 11 =+ pure $ ArrayType (structFieldType sf)+-- Structure types+_decodeLeafStrict dtr l | DTR.typeId dtr == 10 =+ pure . Struct . StructType . V.fromList $ l+_decodeLeafStrict dtr [] = case DTR.typeId dtr of+ 0 -> pure IntType+ 1 -> pure StringType+ 2 -> pure BoolType+ n -> throwError $ sformat ("_decodeLeafStrict: unknown type magic id "%sh) n+_decodeLeafStrict dtr l =+ throwError $ sformat ("_decodeLeafStrict: cannot interpret dtr="%sh%" and fields="%sh) dtr l++_compatibleTypesStrict :: StrictDataType -> StrictDataType -> Bool+_compatibleTypesStrict IntType IntType = True+_compatibleTypesStrict DoubleType DoubleType = True+_compatibleTypesStrict StringType StringType = True+_compatibleTypesStrict (ArrayType et) (ArrayType et') = compatibleTypes et et'+_compatibleTypesStrict (Struct (StructType v)) (Struct (StructType v')) =+ (length v == length v') &&+ and (V.zipWith compatibleTypes (structFieldType <$> v) (structFieldType <$> v'))+_compatibleTypesStrict _ _ = False++tupleType :: SQLType a -> SQLType b -> SQLType (a, b)+tupleType (SQLType dt1) (SQLType dt2) =+ SQLType $ structType [structField "_1" dt1, structField "_2" dt2]++intType :: DataType+intType = StrictType IntType++-- a string+structField :: T.Text -> DataType -> StructField+structField txt = StructField (FieldName txt)++-- The strict structure type+structType :: [StructField] -> DataType+structType = StrictType . Struct . StructType . V.fromList++-- The strict array type+arrayType' :: DataType -> DataType+arrayType' = StrictType . ArrayType++-- Returns the equivalent data type that may be nulled.+canNull :: DataType -> DataType+canNull = NullableType . iInnerStrictType++-- Given a type, returns the corresponding array type.+-- This is preferred to using directly buildType, as it may encounter some+-- overlapping instances.+arrayType :: SQLType a -> SQLType [a]+arrayType (SQLType dt) = SQLType (arrayType' dt)++iInnerStrictType :: DataType -> StrictDataType+iInnerStrictType (StrictType st) = st+iInnerStrictType (NullableType st) = st++iSingleField :: DataType -> Maybe DataType+iSingleField (StrictType (Struct (StructType fields))) = case V.toList fields of+ [StructField _ dt] -> Just dt+ _ -> Nothing+iSingleField _ = Nothing+++structName :: StructType -> Text+structName (StructType fields) =+ "struct(" <> intercalate "," (unFieldName . structFieldName <$> V.toList fields) <> ")"++{-| Builds a type that is a tuple of all the given types.++Following the Spark and SQL convention, the indexing starts at 1.+-}+structTypeTuple :: N.NonEmpty DataType -> StructType+structTypeTuple dts =+ let numFields = length dts+ rawFieldNames = ("_" <> ) . show' <$> (1 N.:| [2..numFields])+ fieldNames = N.toList $ unsafeFieldName <$> rawFieldNames+ fieldTypes = N.toList dts+ -- Unsafe call, but we know it is going to be all different fields+ in forceRight $ structTypeFromFields (zip fieldNames fieldTypes)++{-| Returns a data type instead (the most common use case)++Note that unlike Spark and SQL, the indexing starts from 0.+ -}+structTypeTuple' :: N.NonEmpty DataType -> DataType+structTypeTuple' = StrictType . Struct . structTypeTuple++structTypeFromFields :: [(FieldName, DataType)] -> Try StructType+structTypeFromFields [] = tryError "You cannot build an empty structure"+structTypeFromFields ((hfn, hdt):t) =+ let fs = (hfn, hdt) : t+ ct = StructType $ uncurry StructField <$> V.fromList fs+ names = fst <$> fs+ numNames = length names+ numDistincts = length . nub $ names+ in if numNames == numDistincts+ then return ct+ else tryError $ sformat ("Duplicate field names when building the struct: "%sh) (sort names)++_structFromUnfields :: [(T.Text, DataType)] -> StructType+_structFromUnfields l = StructType . V.fromList $ x where+ x = [StructField (FieldName name) dt | (name, dt) <- l]
+ src/Spark/Core/Internal/TypesGenerics.hs view
@@ -0,0 +1,161 @@+{-# LANGUAGE PolyKinds #-}+{-# LANGUAGE TypeOperators #-}+{-# LANGUAGE OverloadedStrings #-}+{-# LANGUAGE DeriveAnyClass #-}+{-# LANGUAGE FlexibleContexts #-}+{-# LANGUAGE FlexibleInstances #-}+{-# LANGUAGE DefaultSignatures #-}+{-# LANGUAGE ScopedTypeVariables #-}+{-# LANGUAGE BangPatterns #-}+{-# LANGUAGE MultiParamTypeClasses #-}++module Spark.Core.Internal.TypesGenerics where++import qualified Data.Vector as V+import qualified Data.Text as T+import GHC.Generics+import Formatting++import Spark.Core.Internal.TypesStructures+import Spark.Core.Internal.TypesFunctions+import Spark.Core.Internal.Utilities+import Spark.Core.StructuresInternal(FieldName(..), unsafeFieldName)+import Spark.Core.Internal.TypesStructuresRepr(DataTypeRepr, DataTypeElementRepr)++-- The 3rd attempt to get generics conversions.++-- Given a tag on a type, returns the equivalent SQL type.+-- This is the type for a cell, not for a row.+-- TODO(kps) more documentation+buildType :: (HasCallStack, SQLTypeable a) => SQLType a+buildType = _buildType+++-- The class of all the types for which the SQL type can be inferred+-- from the Haskell type only.+-- Two notable exceptions are Row and Cell, which are the dynamic types+-- used by Spark.+-- See also buildType on how to use it.+class SQLTypeable a where+ _genericTypeFromValue :: (HasCallStack) => a -> GenericType+ default _genericTypeFromValue :: (HasCallStack, Generic a, GenSQLTypeable (Rep a)) => a -> GenericType+ _genericTypeFromValue x = genTypeFromProxy (from x)++-- Generic SQLTypeable+class GenSQLTypeable f where+ genTypeFromProxy :: (HasCallStack) => f a -> GenericType+++-- | The only function that should matter for users in this file.+-- Given a type, returns the SQL representation of this type.+_buildType :: forall a. (HasCallStack, SQLTypeable a) => SQLType a+_buildType =+ let dt = _genericTypeFromValue (undefined :: a)+ in SQLType dt++type GenericType = DataType++instance SQLTypeable Int where+ _genericTypeFromValue _ = StrictType IntType++instance SQLTypeable Double where+ _genericTypeFromValue _ = StrictType DoubleType++instance SQLTypeable T.Text where+ _genericTypeFromValue _ = StrictType StringType++instance SQLTypeable Bool where+ _genericTypeFromValue _ = StrictType BoolType++instance SQLTypeable DataTypeRepr+instance SQLTypeable DataTypeElementRepr++instance SQLTypeable DataType where+ _genericTypeFromValue _ = _genericTypeFromValue (undefined :: DataTypeRepr)+++-- instance {-# INCOHERENT #-} SQLTypeable String where+-- _genericTypeFromValue _ = StrictType StringType++instance SQLTypeable a => SQLTypeable (Maybe a) where+ _genericTypeFromValue _ = let SQLType dt = buildType :: (SQLType a) in+ (NullableType . iInnerStrictType) dt++instance {-# OVERLAPPABLE #-} SQLTypeable a => SQLTypeable [a] where+ _genericTypeFromValue _ =+ let SQLType dt = buildType :: (SQLType a) in+ (StrictType . ArrayType) dt+++instance forall a1 a2. (+ SQLTypeable a2,+ SQLTypeable a1) => SQLTypeable (a1, a2) where+ _genericTypeFromValue _ =+ let+ SQLType t1 = buildType :: SQLType a1+ SQLType t2 = buildType :: SQLType a2+ in _buildTupleStruct [t1, t2]++_buildTupleStruct :: [GenericType] -> GenericType+_buildTupleStruct dts =+ let fnames = unsafeFieldName . T.pack. ("_" ++) . show <$> ([1..] :: [Int])+ fs = uncurry StructField <$> zip fnames dts+ in StrictType . Struct . StructType $ V.fromList fs++-- instance (SQLTypeable a, SQLTypeable b) => SQLTypeable (a,b) where+-- _genericTypeFromValue _ = _genericTypeFromValue (undefined :: a) ++ _genericTypeFromValue (undefined :: b)++instance (GenSQLTypeable f) => GenSQLTypeable (M1 D c f) where+ genTypeFromProxy m = genTypeFromProxy (unM1 m)++instance (GenSQLTypeable f, Constructor c) => GenSQLTypeable (M1 C c f) where+ genTypeFromProxy m+ | conIsRecord m =+ let x = unM1 m+ dt = genTypeFromProxy x in+ dt+ | otherwise =+ -- It is assumed to be a newtype and we are going to unwrap it+ let !dt1 = genTypeFromProxy (unM1 m)+ in case iSingleField dt1 of+ Just dt -> dt+ Nothing ->+ failure $ sformat ("M1 C "%sh%" dt1="%sh) n dt1+ where n = conName m++-- Selector Metadata+instance (GenSQLTypeable f, Selector c) => GenSQLTypeable (M1 S c f) where+ genTypeFromProxy m =+ let st = genTypeFromProxy (unM1 m)+ n = selName m+ field = StructField { structFieldName = FieldName $ T.pack n, structFieldType = st }+ st2 = StructType (V.singleton field) in+ StrictType $ Struct st2++instance (SQLTypeable a) => GenSQLTypeable (K1 R a) where+ genTypeFromProxy m = _genericTypeFromValue (unK1 m)++-- Sum branch+instance (GenSQLTypeable a, GenSQLTypeable b) => GenSQLTypeable (a :+: b) where+ genTypeFromProxy (L1 x) = genTypeFromProxy x+ genTypeFromProxy (R1 x) = genTypeFromProxy x++-- Product branch+instance (GenSQLTypeable a, GenSQLTypeable b) => GenSQLTypeable (a :*: b) where+ genTypeFromProxy z =+ -- Due to optimizations that I do not understand, the decomposition has to+ -- be done inside the function.+ -- Otherwise, the value (which is undefined) gets to be evaluated, and breaks+ -- the code.+ let (x1 :*: x2) = z+ y1 = genTypeFromProxy x1+ y2 = genTypeFromProxy x2 in case (y1, y2) of+ (StrictType (Struct s1), StrictType (Struct s2)) ->+ (StrictType . Struct) s where+ fs = structFields s1 V.++ structFields s2+ s = StructType fs+ _ -> failure $ sformat ("should not happen: left="%sh%" right="%sh) y1 y2++-- Void branch+instance GenSQLTypeable U1 where+ genTypeFromProxy _ = failure "U1"
+ src/Spark/Core/Internal/TypesStructures.hs view
@@ -0,0 +1,221 @@+{-# LANGUAGE DeriveGeneric #-}+{-# LANGUAGE OverloadedStrings #-}++{-| The structures of data types in Karps.++For a detailed description of the supported types, see+http://spark.apache.org/docs/latest/sql-programming-guide.html#data-types++At a high-level, Spark DataFrames and Datasets are equivalent to lists of+objects whose type can be mapped to the same StructType:+Dataset a ~ ArrayType StructType (...)+Columns of a dataset are equivalent to lists of object whose type can be+mapped to the same DataType (either Strict or Nullable)+Local data (or "blobs") are single elements whose type can be mapped to a+DataType (either strict or nullable)+-}+module Spark.Core.Internal.TypesStructures where++import Data.Aeson+import Data.Vector(Vector)+import Control.Monad(guard)+import qualified Data.Vector as V+import qualified Data.Aeson as A+import qualified Data.Text as T+import GHC.Generics(Generic)+import Test.QuickCheck++import Spark.Core.StructuresInternal(FieldName(..))+import Spark.Core.Internal.Utilities++-- The core type algebra++-- | The data types that are guaranteed to not be null: evaluating them will return a value.+data StrictDataType =+ IntType+ | DoubleType+ | StringType+ | BoolType+ | Struct !StructType+ | ArrayType !DataType+ deriving (Eq)++-- | All the data types supported by the Spark engine.+-- The data types can either be nullable (they may contain null values) or strict (all the values are present).+-- There are a couple of differences with the algebraic data types in Haskell:+-- Maybe (Maybe a) ~ Maybe a which implies that arbitrary nesting of values will be flattened to a top-level Nullable+-- Similarly, [[]] ~ []+data DataType =+ StrictType !StrictDataType+ | NullableType !StrictDataType deriving (Eq)++-- | A field in a structure+data StructField = StructField {+ structFieldName :: !FieldName,+ structFieldType :: !DataType+} deriving (Eq)++-- | The main structure of a dataframe or a dataset+data StructType = StructType {+ structFields :: !(Vector StructField)+} deriving (Eq)+++-- Convenience types++-- | Represents the choice between a strict and a nullable field+data Nullable = CanNull | NoNull deriving (Show, Eq)++-- | Encodes the type of all the nullable data types+data NullableDataType = NullableDataType !StrictDataType deriving (Eq)++-- | A tagged datatype that encodes the sql types+-- This is the main type information that should be used by users.+data SQLType a = SQLType {+ -- | The underlying data type.+ unSQLType :: !DataType+} deriving (Eq, Generic)+++instance Show DataType where+ show (StrictType x) = show x+ show (NullableType x) = show x ++ "?"++instance Show StrictDataType where+ show StringType = "string"+ show DoubleType = "double"+ show IntType = "int"+ show BoolType = "bool"+ show (Struct struct) = show struct+ show (ArrayType at) = "[" ++ show at ++ "]"++instance Show StructField where+ show field = (T.unpack . unFieldName . structFieldName) field ++ ":" ++ s where+ s = show $ structFieldType field++instance Show StructType where+ show struct = "{" ++ unwords (map show (V.toList . structFields $ struct)) ++ "}"++instance Show (SQLType a) where+ show (SQLType dt) = show dt+++-- QUICKCHECK INSTANCES+++instance Arbitrary StructField where+ arbitrary = do+ name <- elements ["_1", "a", "b", "abc"]+ dt <- arbitrary :: Gen DataType+ return $ StructField (FieldName $ T.pack name) dt++instance Arbitrary StructType where+ arbitrary = do+ fields <- listOf arbitrary+ return . StructType . V.fromList $ fields++instance Arbitrary StrictDataType where+ arbitrary = do+ idx <- elements [1,2] :: Gen Int+ return $ case idx of+ 1 -> StringType+ 2 -> IntType+ _ -> failure "Arbitrary StrictDataType"++instance Arbitrary DataType where+ arbitrary = do+ x <- arbitrary+ u <- arbitrary+ return $ if x then+ StrictType u+ else+ NullableType u++-- AESON INSTANCES++-- This follows the same structure as the JSON generated by Spark.+instance ToJSON StrictDataType where+ toJSON IntType = "integer"+ toJSON DoubleType = "double"+ toJSON StringType = "string"+ toJSON BoolType = "bool"+ toJSON (Struct struct) = toJSON struct+ toJSON (ArrayType (StrictType dt)) =+ object [ "type" .= A.String "array"+ , "elementType" .= toJSON dt+ , "containsNull" .= A.Bool False ]+ toJSON (ArrayType (NullableType dt)) =+ object [ "type" .= A.String "array"+ , "elementType" .= toJSON dt+ , "containsNull" .= A.Bool True ]++instance ToJSON StructType where+ toJSON (StructType fields) =+ let+ fs = (snd . _fieldToJson) <$> V.toList fields+ in object [ "type" .= A.String "struct"+ , "fields" .= fs ]++-- Spark drops the info at the highest level.+instance ToJSON DataType where+ toJSON (StrictType dt) = object [+ "nullable" .= A.Bool False,+ "dt" .= toJSON dt]+ toJSON (NullableType dt) = object [+ "nullable" .= A.Bool True,+ "dt" .= toJSON dt]++instance FromJSON DataType where+ parseJSON = withObject "DataType" $ \o -> do+ nullable <- o .: "nullable"+ dt <- o .: "dt"+ let c = if nullable then NullableType else StrictType+ return (c dt)++instance FromJSON StructField where+ parseJSON = withObject "StructField" $ \o -> do+ n <- o .: "name"+ dt <- o .: "type"+ nullable <- o .: "nullable"+ let c = if nullable then NullableType else StrictType+ return $ StructField (FieldName n) (c dt)++instance FromJSON StructType where+ parseJSON = withObject "StructType" $ \o -> do+ tp <- o .: "type"+ guard (tp == T.pack "struct")+ fs <- o .: "fields"+ return (StructType fs)++instance FromJSON StrictDataType where+ parseJSON (A.String s) = case s of+ "integer" -> return IntType+ "double" -> return DoubleType+ "string" -> return StringType+ "bool" -> return BoolType+ -- TODO: figure out which one is correct+ "boolean" -> return BoolType+ _ -> fail ("StrictDataType: unknown type " ++ T.unpack s)+ parseJSON (Object o) = do+ tp <- o .: "type"+ case T.pack tp of+ "struct" -> Struct <$> parseJSON (Object o)+ "array" -> do+ dt <- o .: "elementType"+ containsNull <- o .: "containsNull"+ let c = if containsNull then NullableType else StrictType+ return $ ArrayType (c dt)+ s -> fail ("StrictDataType: unknown type " ++ T.unpack s)++ parseJSON x = fail ("StrictDataType: cannot parse " ++ show x)+++_fieldToJson :: StructField -> (T.Text, A.Value)+_fieldToJson (StructField (FieldName n) (StrictType dt)) =+ (n, object [ "name" .= A.String n+ , "type" .= toJSON dt+ , "nullable" .= A.Bool False])+_fieldToJson (StructField (FieldName n) (NullableType dt)) =+ (n, object [ "name" .= A.String n+ , "type" .= toJSON dt+ , "nullable" .= A.Bool True])
+ src/Spark/Core/Internal/TypesStructuresRepr.hs view
@@ -0,0 +1,26 @@+{-# LANGUAGE DeriveGeneric #-}+{-# LANGUAGE OverloadedStrings #-}+++module Spark.Core.Internal.TypesStructuresRepr(+ DataTypeElementRepr(..),+ DataTypeRepr(..)+) where++import qualified Data.Text as T+import GHC.Generics(Generic)++-- The inner representation of a dataype as a Row object.+-- This representation is meant to be internal.+-- Because the Spark data types do not support recursive types (trees),+-- This is a flattened representation of types.+data DataTypeElementRepr = DataTypeElementRepr {+ fieldPath :: ![T.Text],+ isNullable :: !Bool,+ typeId :: !Int,+ fieldIndex :: !Int+} deriving (Eq, Show, Generic)++data DataTypeRepr = DataTypeRepr {+ rows :: [DataTypeElementRepr]+} deriving (Eq, Show, Generic)
+ src/Spark/Core/Internal/Utilities.hs view
@@ -0,0 +1,125 @@+{-# LANGUAGE MultiParamTypeClasses #-}+{-# LANGUAGE FlexibleContexts #-}+{-# LANGUAGE BangPatterns #-}+{-# LANGUAGE OverloadedStrings #-}+++{-| A collection of small utility functions.+-}+module Spark.Core.Internal.Utilities(+ LB.HasCallStack,+ UnknownType,+ pretty,+ myGroupBy,+ myGroupBy',+ missing,+ failure,+ failure',+ forceRight,+ show',+ encodeDeterministicPretty,+ withContext,+ strictList,+ traceHint,+ SF.sh,+ (<&>),+ (<>)+ ) where++import Data.Aeson+import Data.Aeson.Encode.Pretty+import qualified Data.ByteString.Lazy.Char8 as Char8+import qualified Data.ByteString.Lazy as LBS+import qualified Data.Text as T+import qualified Formatting.ShortFormatters as SF+import Control.Arrow ((&&&))+import Data.List+import Data.Function+import Data.Text(Text)+import Formatting+import Debug.Trace(trace)+import qualified Data.Map.Strict as M+import Data.Monoid((<>))++import qualified Spark.Core.Internal.LocatedBase as LB++(<&>) :: Functor f => f a -> (a -> b) -> f b+(<&>) = flip fmap++-- | A type that is is not known and that is not meant to be exposed to the+-- user.+data UnknownType++{-| Pretty printing for Aeson values (and deterministic output)+-}+pretty :: Value -> Text+pretty = T.pack . Char8.unpack . encodeDeterministicPretty++-- | Produces a bytestring output of a JSON value that is deterministic+-- and that is invariant to the insertion order of the keys.+-- (i.e the keys are stored in alphabetic order)+-- This is to ensure that all id computations are stable and reproducible+-- on the server part.+-- TODO(kps) use everywhere JSON is converted+encodeDeterministicPretty :: Value -> LBS.ByteString+encodeDeterministicPretty =+ encodePretty' (defConfig { confIndent = Spaces 0, confCompare = compare })++-- | group by+-- TODO: have a non-empty list instead+myGroupBy' :: (Ord b) => (a -> b) -> [a] -> [(b, [a])]+myGroupBy' f = map (f . head &&& id)+ . groupBy ((==) `on` f)+ . sortBy (compare `on` f)++-- | group by+-- TODO: have a non-empty list instead+myGroupBy :: (Ord a) => [(a, b)] -> M.Map a [b]+myGroupBy l = let+ l2 = myGroupBy' fst l in+ M.map (snd <$>) $ M.fromList l2+++-- | Missing implementations in the code base.+missing :: (LB.HasCallStack) => Text -> a+missing msg = LB.error $ T.concat ["MISSING IMPLEMENTATION: ", msg]++{-| The function that is used to trigger exception due to internal programming+errors.++Currently, all programming errors simply trigger an exception. All these+impure functions are tagged with an implicit call stack argument.+-}+failure :: (LB.HasCallStack) => Text -> a+failure msg = LB.error (T.concat ["FAILURE in Spark. Hint: ", msg])++failure' :: (LB.HasCallStack) => Format Text (a -> Text) -> a -> c+failure' x = failure . sformat x+++{-| Given a DataFrame or a LocalFrame, attempts to get the value,+or throws the error.++This function is not total.+-}+forceRight :: (LB.HasCallStack, Show a) => Either a b -> b+forceRight (Right b) = b+forceRight (Left a) = LB.error $+ sformat ("Failure from either, got instead a left: "%shown) a++-- | Force the complete evaluation of a list to WNF.+strictList :: (Show a) => [a] -> [a]+strictList [] = []+strictList (h : t) = let !t' = strictList t in (h : t')++-- | (internal) prints a hint with a value+traceHint :: (Show a) => Text -> a -> a+traceHint hint x = trace (T.unpack hint ++ show x) x++-- | show with Text+show' :: (Show a) => a -> Text+show' x = T.pack (show x)++withContext :: Text -> Either Text a -> Either Text a+withContext _ (Right x) = Right x+withContext msg (Left other) = Left (msg <> "\n>>" <> other)
+ src/Spark/Core/Row.hs view
@@ -0,0 +1,14 @@+module Spark.Core.Row(+ module Spark.Core.Internal.RowStructures,+ ToSQL,+ FromSQL,+ valueToCell,+ cellToValue,+ jsonToCell,+ rowArray+ ) where++import Spark.Core.Internal.RowStructures+import Spark.Core.Internal.RowGenerics+import Spark.Core.Internal.RowGenericsFrom+import Spark.Core.Internal.RowUtils
+ src/Spark/Core/StructuresInternal.hs view
@@ -0,0 +1,149 @@+{-# LANGUAGE DeriveGeneric #-}+{-# LANGUAGE FlexibleContexts #-}+{-# LANGUAGE OverloadedStrings #-}++-- Some basic structures about nodes in a graph, etc.++module Spark.Core.StructuresInternal(+ NodeName(..),+ NodePath(..),+ NodeId(..),+ FieldName(..),+ FieldPath(..),+ ComputationID(..),+ catNodePath,+ fieldName,+ unsafeFieldName,+ emptyFieldPath,+ nullFieldPath,+ headFieldPath,+ fieldPath,+ prettyNodePath,+) where++import qualified Data.Text as T+import Data.ByteString(ByteString)+import GHC.Generics (Generic)+import Data.Hashable(Hashable)+import Data.List(intercalate)+import qualified Data.Aeson as A+import Data.String(IsString(..))+import Data.Vector(Vector)+import qualified Data.Vector as V++import Spark.Core.Internal.Utilities++-- | The name of a node (without path information)+newtype NodeName = NodeName { unNodeName :: T.Text } deriving (Eq, Ord)++-- | The user-defined path of the node in the hierarchical representation of the graph.+newtype NodePath = NodePath { unNodePath :: Vector NodeName } deriving (Eq, Ord)++-- | The unique ID of a node. It is based on the parents of the node+-- and all the relevant intrinsic values of the node.+newtype NodeId = NodeId { unNodeId :: ByteString } deriving (Eq, Ord, Generic)++-- | The name of a field in a sql structure+-- This structure ensures that proper escaping happens if required.+-- TODO: prevent the constructor from being used, it should be checked first.+newtype FieldName = FieldName { unFieldName :: T.Text } deriving (Eq)++-- | A path to a nested field an a sql structure.+-- This structure ensures that proper escaping happens if required.+newtype FieldPath = FieldPath { unFieldPath :: Vector FieldName } deriving (Eq)++{-| A unique identifier for a computation (a batch of nodes sent for execution+to Spark).+-}+data ComputationID = ComputationID {+ unComputationID :: !T.Text+} deriving (Eq, Show, Generic)++++-- | A safe constructor for field names that fixes all the issues relevant to+-- SQL escaping+-- TODO: proper implementation+fieldName :: T.Text -> Either String FieldName+fieldName = Right . FieldName++-- | Constructs the field name, but will fail if the content is not correct.+unsafeFieldName :: (HasCallStack) => T.Text -> FieldName+unsafeFieldName = forceRight . fieldName++-- | A safe constructor for field names that fixes all the issues relevant to SQL escaping+-- TODO: proper implementation+fieldPath :: T.Text -> Either String FieldPath+fieldPath x = Right . FieldPath . V.singleton $ FieldName x++emptyFieldPath :: FieldPath+emptyFieldPath = FieldPath V.empty++nullFieldPath :: FieldPath -> Bool+nullFieldPath = V.null . unFieldPath++headFieldPath :: FieldPath -> Maybe FieldName+headFieldPath (FieldPath v) | V.null v = Nothing+headFieldPath (FieldPath v) = Just $ V.head v++-- | The concatenated path. This is the inverse function of fieldPath.+-- | TODO: this one should be hidden?+catNodePath :: NodePath -> T.Text+catNodePath (NodePath np) =+ T.intercalate "/" (unNodeName <$> V.toList np)++prettyNodePath :: NodePath -> T.Text+-- Only a single slash, double slashes are reserved for the case+-- of global paths (including session and computation)+prettyNodePath np = "/" <> catNodePath np++instance Show NodeId where+ show (NodeId bs) = let s = show bs in+ if length s > 9 then+ (drop 1 . take 6) s ++ ".."+ else+ s++instance Show NodeName where+ show (NodeName nn) = T.unpack nn++instance Show NodePath where+ show np = T.unpack $ T.concat ["NPath(", catNodePath np, ")" ]++instance Show FieldPath where+ show (FieldPath l) =+ intercalate "." (show <$> V.toList l)++instance Show FieldName where+ -- TODO(kps) escape the '.' characters in the field name+ show (FieldName fn) = T.unpack fn++instance Hashable NodeId++instance IsString FieldName where+ fromString = FieldName . T.pack++instance A.ToJSON NodeName where+ toJSON = A.toJSON . unNodeName++instance A.FromJSON NodeName where+ -- TODO: more parse checks+ parseJSON x = NodeName <$> A.parseJSON x++instance A.ToJSON NodePath where+ toJSON = A.toJSON . unNodePath++instance A.FromJSON NodePath where+ parseJSON x = NodePath <$> A.parseJSON x++instance A.ToJSON FieldName where+ toJSON = A.toJSON . unFieldName++instance A.ToJSON FieldPath where+ toJSON = A.toJSON . unFieldPath++instance Ord FieldName where+ compare f1 f2 = compare (unFieldName f1) (unFieldName f2)++instance A.ToJSON ComputationID where+ toJSON = A.toJSON . unComputationID
+ src/Spark/Core/Try.hs view
@@ -0,0 +1,51 @@++{-|+Useful classes and functions to deal with failures+within the Karps framework.++This is a developer API. Users should not have to invoke functions+from this module.+-}+module Spark.Core.Try(+ NodeError(..),+ Try,+ tryError,+ tryEither+ ) where++import qualified Data.Text as T+import qualified Data.Vector as V++import Spark.Core.StructuresInternal++-- | An error associated to a particular node (an observable or a dataset).+data NodeError = Error {+ ePath :: NodePath,+ eMessage :: T.Text+} deriving (Eq, Show)++-- | The common result of attempting to build something.+type Try = Either NodeError+++-- TODO: rename to tryError+_error :: T.Text -> Try a+_error txt = Left Error {+ ePath = NodePath V.empty,+ eMessage = txt+ }++-- | Returns an error object given a text clue.+tryError :: T.Text -> Try a+tryError = _error++-- | Returns an error object given a string clue.+--Remove this method+--tryError' :: String -> Try a+--tryError' = _error . T.pack++-- | (internal)+-- Given a potentially errored object, converts it to a Try.+tryEither :: Either T.Text a -> Try a+tryEither (Left msg) = tryError msg+tryEither (Right x) = Right x
+ src/Spark/Core/Types.hs view
@@ -0,0 +1,38 @@+{-# LANGUAGE OverloadedStrings #-}+{-# LANGUAGE ScopedTypeVariables #-}++module Spark.Core.Types(+ DataType,+ Nullable(..),+ TupleEquivalence(..),+ NameTuple(..),+ -- intType,+ -- canNull,+ -- noNull,+ -- stringType,+ -- arrayType',+ -- cellType,+ -- structField,+ -- structType,+ -- arrayType,+ SQLType,+ columnType,+ SQLTypeable,+ buildType,+ StructField,+ StructType,+ -- castType,+ catNodePath,+ unSQLType+) where++import Spark.Core.Internal.TypesStructures+import Spark.Core.Internal.TypesGenerics+import Spark.Core.Internal.TypesFunctions+import Spark.Core.StructuresInternal+import Spark.Core.Internal.FunctionsInternals(TupleEquivalence(..), NameTuple(..))++-- | Description of types supported in DataSets+-- Karps supports a restrictive subset of Algebraic Datatypes that is amenable to SQL+-- transformations. This file contains the description of all the supported types, and some+-- conversion tools.
+ src/Spark/IO/Inputs.hs view
@@ -0,0 +1,14 @@++module Spark.IO.Inputs(+ SparkPath,+ JsonMode,+ DataSchema,+ JsonOptions,+ SourceDescription,+ json',+ json,+ jsonInfer+) where++import Spark.IO.Internal.Json+import Spark.IO.Internal.InputGeneric
+ src/Spark/IO/Internal/InputGeneric.hs view
@@ -0,0 +1,172 @@+{-# LANGUAGE ScopedTypeVariables #-}+{-# LANGUAGE OverloadedStrings #-}++module Spark.IO.Internal.InputGeneric(+ SparkPath(..),+ DataSchema(..),+ InputOptionValue(..),+ InputOptionKey(..),+ DataFormat(..),+ SourceDescription(..),+ generic',+ genericWithSchema',+ genericWithSchema+) where++import Data.Text(Text)+import Data.String(IsString(..))+import qualified Data.Map.Strict as M+import qualified Data.Aeson as A+import qualified Data.Text as T+import Data.Aeson(toJSON, (.=))+-- import Debug.Trace++import Spark.Core.Types+import Spark.Core.Context+import Spark.Core.Try+import Spark.Core.Dataset++import Spark.Core.Internal.Utilities(forceRight)+import Spark.Core.Internal.DatasetFunctions(asDF, emptyDataset, emptyLocalData)+import Spark.Core.Internal.TypesStructures(SQLType(..))+import Spark.Core.Internal.OpStructures++{-| A path to some data that can be read by Spark.+-}+newtype SparkPath = SparkPath Text deriving (Show, Eq)++{-| The schema policty with respect to a data source. It should either+request Spark to infer the schema from the source, or it should try to+match the source against a schema provided by the user.+-}+data DataSchema = InferSchema | UseSchema DataType deriving (Show, Eq)++{-| The low-level option values accepted by the Spark reader API.+-}+data InputOptionValue =+ InputIntOption Int+ | InputDoubleOption Double+ | InputStringOption Text+ | InputBooleanOption Bool+ deriving (Eq, Show)++instance A.ToJSON InputOptionValue where+ toJSON (InputIntOption i) = toJSON i+ toJSON (InputDoubleOption d) = toJSON d+ toJSON (InputStringOption s) = toJSON s+ toJSON (InputBooleanOption b) = toJSON b++newtype InputOptionKey = InputOptionKey { unInputOptionKey :: Text } deriving (Eq, Show, Ord)++{-| The type of the source.++This enumeration contains all the data formats that are natively supported by+Spark, either for input or for output, and allows the users to express their+own format if requested.+-}+data DataFormat =+ JsonFormat+ | TextFormat+ | CsvFormat+ | CustomSourceFormat !Text+ deriving (Eq, Show)+-- data InputSource = JsonSource | TextSource | CsvSource | InputSource SparkPath++{-| A description of a data source, following Spark's reader API version 2.++Eeach source constists in an input source (json, xml, etc.), an optional schema+for this source, and a number of options specific to this source.++Since this descriptions is rather low-level, a number of wrappers of provided+for each of the most popular sources that are already built into Spark.+-}+data SourceDescription = SourceDescription {+ inputPath :: !SparkPath,+ inputSource :: !DataFormat,+ inputSchema :: !DataSchema,+ sdOptions :: !(M.Map InputOptionKey InputOptionValue),+ inputStamp :: !(Maybe DataInputStamp)+} deriving (Eq, Show)++instance IsString SparkPath where+ fromString = SparkPath . T.pack++{-| Generates a dataframe from a source description.++This may trigger some calculations on the Spark side if schema inference is+required.+-}+generic' :: SourceDescription -> SparkState DataFrame+generic' sd = do+ dtt <- _inferSchema sd+ return $ dtt >>= \dt -> genericWithSchema' dt sd++{-| Generates a dataframe from a source description, and assumes a given schema.++This schema overrides whatever may have been given in the source description. If+the source description specified that the schema must be checked or inferred,+this instruction is overriden.++While this is convenient, it may lead to runtime errors that are hard to+understand if the data does not follow the given schema.+-}+genericWithSchema' :: DataType -> SourceDescription -> DataFrame+genericWithSchema' dt sd = asDF $ emptyDataset no (SQLType dt) where+ sd' = sd { inputSchema = UseSchema dt }+ so = StandardOperator {+ soName = "org.spark.GenericDatasource",+ soOutputType = dt,+ soExtra = A.toJSON sd'+ }+ no = NodeDistributedOp so++{-| Generates a dataframe from a source description, and assumes a certain+schema on the source.+-}+genericWithSchema :: forall a. (SQLTypeable a) => SourceDescription -> Dataset a+genericWithSchema sd =+ let sqlt = buildType :: SQLType a+ dt = unSQLType sqlt in+ forceRight $ castType sqlt =<< genericWithSchema' dt sd++-- Wraps the action of inferring the schema.+-- This is not particularly efficient here: it does a first pass to get the+-- schema, and then will do a second pass in order to read the data.+_inferSchema :: SourceDescription -> SparkState (Try DataType)+_inferSchema = executeCommand1 . _inferSchemaCmd++-- TODO: this is a monoidal operation, it could be turned into a universal+-- aggregator.+_inferSchemaCmd :: SourceDescription -> LocalData DataType+_inferSchemaCmd sd = emptyLocalData no sqlt where+ sqlt = buildType :: SQLType DataType+ dt = unSQLType sqlt+ so = StandardOperator {+ soName = "org.spark.InferSchema",+ soOutputType = dt,+ soExtra = A.toJSON sd+ }+ no = NodeOpaqueAggregator so++instance A.ToJSON SparkPath where+ toJSON (SparkPath p) = toJSON p++instance A.ToJSON DataSchema where+ toJSON InferSchema = "infer_schema"+ toJSON (UseSchema dt) = toJSON dt++instance A.ToJSON DataFormat where+ toJSON JsonFormat = "json"+ toJSON TextFormat = "text"+ toJSON CsvFormat = "csv"+ toJSON (CustomSourceFormat s) = toJSON s++instance A.ToJSON SourceDescription where+ toJSON sd = A.object [+ "inputPath" .= toJSON (inputPath sd),+ "inputSource" .= toJSON (inputSource sd),+ "inputSchema" .= toJSON (inputSchema sd),+ "inputStamp" .= A.Null,+ "options" .= A.object (f <$> M.toList (sdOptions sd))+ ] where+ f (k, v) = unInputOptionKey k .= toJSON v
+ src/Spark/IO/Internal/Json.hs view
@@ -0,0 +1,107 @@+{-# LANGUAGE OverloadedStrings #-}+{-# LANGUAGE ScopedTypeVariables #-}++module Spark.IO.Internal.Json(+ JsonMode,+ JsonOptions(..),+ json',+ json,+ jsonInfer,+ jsonOpt',+ jsonOpt,+ defaultJsonOptions+) where++import qualified Data.Map.Strict as M+import Data.Text(pack)+++import Spark.Core.Types+import Spark.Core.Dataset(DataFrame, Dataset, castType')+import Spark.Core.Context+import Spark.Core.Try++import Spark.IO.Internal.InputGeneric++{-|+-}+data JsonMode = Permissive | DropMalformed | FailFast++{-| The options for the json input.+-}+data JsonOptions = JsonOptions {+ mode :: !JsonMode,+ jsonSchema :: !DataSchema+}+++{-| Declares a source of data of the given data type.++The source is not read at this point, it is just declared. It may be found to be+invalid in subsequent computations.+-}+json' :: DataType -> String -> DataFrame+json' dt p = genericWithSchema' dt (_jsonSourceDescription (SparkPath (pack p)) defaultJsonOptions)++{-| Declares a source of data of the given data type.++The source is not read at this point, it is just declared.+-}+json :: (SQLTypeable a) => String -> Dataset a+json p = genericWithSchema (_jsonSourceDescription (SparkPath (pack p)) defaultJsonOptions)++{-| Reads a source of data expected to be in the JSON format.++The schema is not required and Spark will infer the schema of the source.+However, all the data contained in the source may end up being read in the+process.+-}+jsonInfer :: SparkPath -> SparkState DataFrame+jsonInfer = jsonOpt' defaultJsonOptions++{-| Reads a source of data expected to be in the JSON format.++The schema is not required and Spark will infer the schema of the source.+However, all the data contained in the source may end up being read in the+process.+-}+jsonOpt' :: JsonOptions -> SparkPath -> SparkState DataFrame+jsonOpt' jo sp = generic' (_jsonSourceDescription sp jo)++{-| Reads a source of data expected to be in the JSON format.++The schema is not required and Spark will infer the schema of the source.+However, all the data contained in the source may end up being read in the+process.+-}+jsonOpt :: forall a. (SQLTypeable a) => JsonOptions -> SparkPath -> SparkState (Try (Dataset a))+jsonOpt jo sp =+ let sqlt = buildType :: SQLType a+ dt = unSQLType sqlt+ jo' = jo { jsonSchema = UseSchema dt }+ in castType' sqlt <$> jsonOpt' jo' sp++defaultJsonOptions :: JsonOptions+defaultJsonOptions = JsonOptions {+ -- Fail fast by default, to be conservative about errors,+ -- and respect the strictness arguments.+ mode = FailFast,+ jsonSchema = InferSchema+}++_jsonSourceDescription :: SparkPath -> JsonOptions -> SourceDescription+_jsonSourceDescription sp jo = SourceDescription {+ inputSource = JsonFormat,+ inputPath = sp,+ inputSchema = jsonSchema jo,+ sdOptions = _jsonOptions jo,+ inputStamp = Nothing+}++_jsonOptions :: JsonOptions -> M.Map InputOptionKey InputOptionValue+_jsonOptions jo = M.fromList [(InputOptionKey "mode", _mode (mode jo))]++_mode :: JsonMode -> InputOptionValue+_mode Permissive = InputStringOption "PERMISSIVE"+_mode DropMalformed = InputStringOption "DROPMALFORMED"+_mode FailFast = InputStringOption "FAILFAST"
+ src/Spark/IO/Internal/OutputCommon.hs view
@@ -0,0 +1,107 @@+{-# LANGUAGE ScopedTypeVariables #-}+{-# LANGUAGE OverloadedStrings #-}+++module Spark.IO.Internal.OutputCommon(+ SaveMode(..),+ OutputBucket,+ DynOutputBucket,+ OutputPartition,+ DynOutputPartition,+ SavingDescription(..),+ partition,+ partition',+ bucket,+ bucket',+ saveDefaults,+ saveCol+) where++-- import Data.Text(Text)+-- import qualified Data.Map.Strict as M+-- import qualified Data.Aeson as A+-- import Data.Aeson(toJSON, (.=))++-- import Spark.Core.Types+-- import Spark.Core.Context+import Spark.Core.Try+import Spark.Core.Column+-- import Spark.Core.ColumnFunctions+-- import Spark.Core.Row+import Spark.Core.Dataset++import Spark.Core.Internal.ColumnStructures(UnknownReference, UntypedColumnData)+import Spark.Core.Internal.ColumnFunctions(dropColReference)+import Spark.Core.Internal.Utilities+import Spark.IO.Internal.InputGeneric++{-| The mode when saving the data.+-}+data SaveMode =+ Overwrite+ | Append+ | Ignore+ | ErrorIfExists deriving(Eq, Show)++data OutputPartition ref = OutputPartition UntypedColumnData++type DynOutputPartition = Try (OutputPartition UnknownReference)++data OutputBucket ref = OutputBucket UntypedColumnData++type DynOutputBucket = Try (OutputBucket UnknownReference)++partition :: Column ref a -> OutputPartition ref+partition = OutputPartition . dropColType . dropColReference++partition' :: DynColumn -> DynOutputPartition+partition' = fmap partition++bucket :: Column ref a -> OutputBucket ref+bucket = OutputBucket . dropColType . dropColReference++bucket' :: DynColumn -> DynOutputBucket+bucket' = fmap bucket+++data SavingDescription ref a = SavingDescription {+ partitions :: ![OutputPartition ref],+ buckets :: ![OutputBucket ref],+ savedCol :: !(Column ref a),+ saveFormat :: !DataFormat,+ savePath :: !SparkPath+}++saveDefaults :: SparkPath -> DataFormat -> Column ref a -> SavingDescription ref a+saveDefaults sp f c = SavingDescription {+ partitions = [],+ buckets = [],+ savedCol = c,+ saveFormat = f,+ savePath = sp+}++{-| Inserts an action to store the given dataframe in the graph of computations.++NOTE: Because of some limitations in Spark, all the columns used when forming+the buckets and the parttions must be present inside the column being written.+These columns will be appended to the column being written if they happen to be+missing. The consequence is that more data may be written than expected.++It returns true if the update was successful. The return type is subject to+ change.+-}+saveCol :: SavingDescription ref a -> LocalData Bool+saveCol _ = missing "saveCol"++-- test :: Int+-- test =+-- let c = undefined :: Column Int Int+-- ld = saveCol (saveDefaults undefined JsonFormat c) { partitions = [partition c, partition c] }+-- in 3+--+-- repeatDS :: Column ref Int -> Column ref a -> Dataset a+--+-- repeatFast :: Column ref Int -> Column ref a -> Dataset a+--+-- repeatScatter :: Int -> Column ref Int -> Column ref a -> Dataset a
+ test-integration/Spark/Core/CachingSpec.hs view
@@ -0,0 +1,45 @@+{-# LANGUAGE MultiParamTypeClasses #-}+{-# LANGUAGE OverloadedStrings #-}++module Spark.Core.CachingSpec where++import Test.Hspec+import qualified Data.Text++import Spark.Core.Context+import Spark.Core.Functions+import Spark.Core.Column+import Spark.Core.ColumnFunctions+import Spark.Core.StructuresInternal(ComputationID(..))+++-- Collecting a dataset made from a list should yield the same list (modulo+-- some reordering)+collectIdempotent :: [Int] -> IO ()+collectIdempotent l = do+ -- stats <- computationStatsDef (ComputationID "0")+ -- print "STATS"+ -- print (show stats)+ let ds = dataset l+ let ds' = autocache ds+ let c1 = asCol ds'+ let s1 = sumCol c1+ let s2 = count ds'+ let x = s1 + s2+ l2 <- exec1Def x+ l2 `shouldBe` (sum l + length l)++run :: String -> IO () -> SpecWith (Arg (IO ()))+run s f = it s $ do+ createSparkSessionDef $ defaultConf { confRequestedSessionName = Data.Text.pack s }+ f+ -- This is horribly not robust to any sort of failure, but it will do for now+ -- TODO(kps) make more robust+ closeSparkSessionDef+ return ()++spec :: Spec+spec = do+ describe "Integration test - caching on ints" $ do+ run "cache_sum1" $+ collectIdempotent ([1,2,3] :: [Int])
+ test-integration/Spark/Core/CollectSpec.hs view
@@ -0,0 +1,62 @@+{-# LANGUAGE MultiParamTypeClasses #-}+{-# LANGUAGE OverloadedStrings #-}++module Spark.Core.CollectSpec where++import Test.Hspec+import qualified Data.Text+import Data.List(sort)++import Spark.Core.Context+import Spark.Core.Types+import Spark.Core.Row+import Spark.Core.Functions+import Spark.Core.Column+import Spark.Core.IntegrationUtilities+import Spark.Core.Internal.Utilities+++-- Collecting a dataset made from a list should yield the same list (modulo+-- some reordering)+-- TODO: replace the ordering by the canonical ordering over the data+collectIdempotent :: (Ord a, Eq a, Show a, SQLTypeable a, ToSQL a, FromSQL a) => [a] -> IO ()+collectIdempotent l = do+ let ds = dataset l+ l2 <- exec1Def $ collect (asCol ds)+ l2 `shouldBe` sort l++run :: String -> IO () -> SpecWith (Arg (IO ()))+run s f = it s $ do+ createSparkSessionDef $ defaultConf { confRequestedSessionName = Data.Text.pack s }+ f+ -- This is horribly not robust to any sort of failure, but it will do for now+ -- TODO(kps) make more robust+ closeSparkSessionDef+ return ()++spec :: Spec+spec = do+ describe "Integration test - collect on ints" $ do+ run "running_twice" $ do+ let ds = dataset [1::Int,2]+ let c = traceHint "c=" $ collect (asCol ds)+ l2 <- exec1Def $ c+ l2' <- exec1Def $ collect (asCol ds)+ l2 `shouldBe` l2'+ run "empty_ints1" $+ collectIdempotent ([] :: [Int])+ run "ints1" $+ collectIdempotent ([4,5,1,2,3] :: [Int])+ run "ints1_opt" $+ collectIdempotent ([Just 1, Nothing] :: [Maybe Int])+ run "nothing_ints_opt" $+ collectIdempotent ([Nothing] :: [Maybe Int])+ run "ints1_opt" $+ collectIdempotent ([Just 1, Just 2] :: [Maybe Int])+ run "empty_ints_opt" $+ collectIdempotent ([] :: [Maybe Int])+ describe "Integration test - collect on TestStruct5" $ do+ run "empty_TestStruct5" $+ collectIdempotent ([] :: [TestStruct5])+ run "single_TestStruct5" $+ collectIdempotent ([TestStruct5 1 2] :: [TestStruct5])
+ test-integration/Spark/Core/ColumnSpec.hs view
@@ -0,0 +1,59 @@+{-# LANGUAGE MultiParamTypeClasses #-}+{-# LANGUAGE OverloadedStrings #-}++module Spark.Core.ColumnSpec where++import Test.Hspec+import Data.List.NonEmpty(NonEmpty( (:|) ))++import Spark.Core.Context+import Spark.Core.Dataset+import Spark.Core.Column+import Spark.Core.Row+import Spark.Core.Functions+import Spark.Core.ColumnFunctions+import Spark.Core.SimpleAddSpec(run)+import Spark.Core.Internal.LocalDataFunctions(iPackTupleObs)+import Spark.Core.Internal.DatasetFunctions(untypedLocalData)++myScaler :: Column ref Double -> Column ref Double+myScaler col =+ let cnt = asDouble (countCol col)+ m = sumCol col / cnt+ centered = col .- m+ stdDev = sumCol (centered * centered) / cnt+ in centered ./ stdDev+++spec :: Spec+spec = do+ describe "local data operations" $ do+ run "broadcastPair_struct" $ do+ let ds = dataset [1] :: Dataset Int+ let cnt = countCol (asCol ds)+ let c = collect (asCol ds .+ cnt)+ res <- exec1Def c+ res `shouldBe` [2]+ run "LocalPack (doubles)" $ do+ let x = untypedLocalData (1 :: LocalData Double)+ let x2 = iPackTupleObs (x :| [x])+ res <- exec1Def x2+ res `shouldBe` rowArray [DoubleElement 1, DoubleElement 1]+ run "LocalPack" $ do+ let x = untypedLocalData (1 :: LocalData Int)+ let x2 = iPackTupleObs (x :| [x])+ res <- exec1Def x2+ res `shouldBe` rowArray [IntElement 1, IntElement 1]+ run "BroadcastPair" $ do+ let x = 1 :: LocalData Int+ let ds = dataset [2, 3] :: Dataset Int+ let ds2 = broadcastPair ds x+ res <- exec1Def (collect (asCol ds2))+ res `shouldBe` [(2, 1), (3, 1)]+ -- TODO: this combines a lot of elements together.+ describe "columns - integration" $ do+ run "mean" $ do+ let ds = dataset [-1, 1] :: Dataset Double+ let c = myScaler (asCol ds)+ res <- exec1Def (collect c)+ res `shouldBe` [-1, 1]
+ test-integration/Spark/Core/GroupsSpec.hs view
@@ -0,0 +1,35 @@+{-# LANGUAGE MultiParamTypeClasses #-}+{-# LANGUAGE OverloadedStrings #-}++module Spark.Core.GroupsSpec where++import Test.Hspec+import Data.Text(Text)++import Spark.Core.Context+import Spark.Core.Functions+import Spark.Core.ColumnFunctions+import Spark.Core.Column+import Spark.Core.IntegrationUtilities+import Spark.Core.CollectSpec(run)+import Spark.Core.Internal.Groups++sumGroup :: [MyPair] -> [(Text, Int)] -> IO ()+sumGroup l lexp = do+ let ds = dataset l+ let keys = ds // myKey'+ let values = ds // myVal'+ let g = groupByKey keys values+ let ds2 = g `aggKey` sumCol+ l2 <- exec1Def $ collect (asCol ds2)+ l2 `shouldBe` lexp++spec :: Spec+spec = do+ describe "Integration test - groups on (text, int)" $ do+ run "empty" $+ sumGroup [] []+ run "one" $+ sumGroup [MyPair "x" 1] [("x", 1)]+ run "two" $+ sumGroup [MyPair "x" 1, MyPair "x" 2, MyPair "y" 1] [("x", 3), ("y", 1)]
+ test-integration/Spark/Core/IntegrationUtilities.hs view
@@ -0,0 +1,74 @@+{-# LANGUAGE MultiParamTypeClasses #-}+{-# LANGUAGE OverloadedStrings #-}+{-# LANGUAGE DeriveGeneric #-}+{-# LANGUAGE GeneralizedNewtypeDeriving #-}++module Spark.Core.IntegrationUtilities where++import GHC.Generics (Generic)+import Data.Text(Text)+import Data.Aeson(ToJSON)++import Spark.Core.Context+import Spark.Core.Types+import Spark.Core.Row+import Spark.Core.Column++data TestStruct1 = TestStruct1 {+ ts1f1 :: Int,+ ts1f2 :: Maybe Int } deriving (Show, Eq, Generic)+instance ToSQL TestStruct1+instance FromSQL TestStruct1+instance SQLTypeable TestStruct1++data TestStruct2 = TestStruct2 {+ ts2f1 :: [Int]+} deriving (Show, Generic)+instance SQLTypeable TestStruct2++data TestStruct3 = TestStruct3 {+ ts3f1 :: Int+} deriving (Show, Eq, Generic)+instance ToSQL TestStruct3+instance SQLTypeable TestStruct3++data TestStruct4 = TestStruct4 {+ ts4f1 :: TestStruct3+} deriving (Show, Eq, Generic)++data TestStruct5 = TestStruct5 {+ ts5f1 :: Int,+ ts5f2 :: Int+} deriving (Show, Eq, Generic, Ord)+-- instance ToJSON TestStruct5+instance SQLTypeable TestStruct5+instance FromSQL TestStruct5+instance ToSQL TestStruct5++data TestStruct6 = TestStruct6 {+ ts6f1 :: Int,+ ts6f2 :: Int,+ ts6f3 :: TestStruct3+} deriving (Show, Eq, Generic)++data TestStruct7 = TestStruct7 {+ ts7f1 :: Text+} deriving (Show, Eq, Generic)+instance ToSQL TestStruct7+instance SQLTypeable TestStruct7+instance ToJSON TestStruct7++newtype TestT1 = TestT1 {+ unTestT1 :: Int+} deriving (Eq, Show, Generic, Num)++data MyPair = MyPair {+ myKey :: Text,+ myVal :: Int } deriving (Generic, Show)++myKey' :: StaticColProjection MyPair Text+myKey' = unsafeStaticProjection buildType "myKey"+myVal' :: StaticColProjection MyPair Int+myVal' = unsafeStaticProjection buildType "myVal"+instance SQLTypeable MyPair+instance ToSQL MyPair
+ test-integration/Spark/Core/JoinsSpec.hs view
@@ -0,0 +1,33 @@+{-# LANGUAGE MultiParamTypeClasses #-}+{-# LANGUAGE OverloadedStrings #-}++module Spark.Core.JoinsSpec where++import Test.Hspec++import Spark.Core.Context+import Spark.Core.Dataset+import Spark.Core.Column+import Spark.Core.ColumnFunctions+import Spark.Core.Row+import Spark.Core.Functions+import Spark.Core.SimpleAddSpec(run)++spec :: Spec+spec = do+ describe "Path test" $ do+ run "test_path1" $ do+ let ds1 = dataset [1] :: Dataset Int+ let x1 = sumCol (asCol ds1) @@ "x1"+ let x2 = ((x1 + 1) @@ "x2") `logicalParents` [untyped ds1]+ res <- exec1Def x2+ res `shouldBe` 2+ -- describe "Join test - join on ints" $ do+ -- run "empty_ints1" $ do+ -- let ds1 = dataset [(1,2)] :: Dataset (Int, Int)+ -- let ds2 = dataset [(1,3)] :: Dataset (Int, Int)+ -- let df1 = asDF ds1+ -- let df2 = asDF ds2+ -- let df = joinInner' (df1/-"_1") (df1/-"_2") (df2/-"_1") (df2/-"_2" @@ "_3")+ -- res <- exec1Def' (collect' (asCol' df))+ -- res `shouldBe` rowArray [rowArray [IntElement 1, IntElement 2, IntElement 3]]
+ test-integration/Spark/Core/PruningSpec.hs view
@@ -0,0 +1,37 @@+{-# LANGUAGE MultiParamTypeClasses #-}+{-# LANGUAGE OverloadedStrings #-}++module Spark.Core.PruningSpec where++import Test.Hspec+import qualified Data.Text as T+import Data.List(sort)++import Spark.Core.Context+import Spark.Core.Types+import Spark.Core.Row+import Spark.Core.Functions+import Spark.Core.Column+import Spark.Core.IntegrationUtilities+import Spark.Core.CollectSpec(run)++run2 :: T.Text -> IO () -> SpecWith (Arg (IO ()))+run2 s f = it (T.unpack s) $ do+ createSparkSessionDef $ defaultConf {+ confRequestedSessionName = s,+ confUseNodePrunning = True }+ f+ -- This is horribly not robust to any sort of failure, but it will do for now+ -- TODO(kps) make more robust+ closeSparkSessionDef+ return ()+++spec :: Spec+spec = do+ describe "Integration test - pruning" $ do+ run2 "running_twice" $ do+ let ds = dataset [1::Int,2]+ l2 <- exec1Def $ collect (asCol ds)+ l2' <- exec1Def $ collect (asCol ds)+ l2 `shouldBe` l2'
+ test-integration/Spark/Core/SimpleAddSpec.hs view
@@ -0,0 +1,66 @@+{-# LANGUAGE MultiParamTypeClasses #-}+{-# LANGUAGE OverloadedStrings #-}++module Spark.Core.SimpleAddSpec where++import Test.Hspec+import qualified Data.Text++import Spark.Core.Context+import Spark.Core.Types+import Spark.Core.Row+import Spark.Core.Functions+++smallSum :: (Eq a, Show a, SQLTypeable a, ToSQL a, FromSQL a, Num a) => a -> a -> IO ()+smallSum x y = do+ let x' = constant x+ let y' = constant y+ let z1' = x' + y'+ z1 <- exec1Def z1'+ z1 `shouldBe` (x + y)+ let z2' = y' + x'+ z2 <- exec1Def z2'+ z2 `shouldBe` (x + y)++negation :: (Eq a, Show a, SQLTypeable a, ToSQL a, FromSQL a, Num a) => a -> a -> IO ()+negation x y = do+ let x' = constant x+ let y' = constant y+ let z1' = x' - y'+ z1 <- exec1Def z1'+ z1 `shouldBe` (x - y)+ let z2' = y' - x'+ z2 <- exec1Def z2'+ z2 `shouldBe` (y - x)++checkNegate :: (Eq a, Show a, SQLTypeable a, ToSQL a, FromSQL a, Num a) => a -> IO ()+checkNegate x = do+ let x' = constant x+ let z1' = negate x'+ z1 <- exec1Def z1'+ z1 `shouldBe` negate x++run :: String -> IO () -> SpecWith (Arg (IO ()))+run s f = it s $ do+ createSparkSessionDef $ defaultConf {+ confRequestedSessionName = Data.Text.pack s,+ confPollingIntervalMillis = 100,+ confUseNodePrunning = False } -- Disabling caching for now, it causes issues.+ f+ -- This is horribly not robust to any sort of failure, but it will do for now+ -- TODO(kps) make more robust+ closeSparkSessionDef+ return ()++spec :: Spec+spec = do+ describe "Integration test - sum on ints" $ do+ run "empty_ints1" $+ smallSum (1 :: Int) (2 :: Int)+ run "zero_ints1" $+ smallSum (0 :: Int) (2 :: Int)+ run "negation_ints1" $+ negation (1 :: Int) (2 :: Int)+ run "negate_ints1" $+ checkNegate (1 :: Int)
+ test-integration/Spark/IO/JsonSpec.hs view
@@ -0,0 +1,41 @@+{-# LANGUAGE MultiParamTypeClasses #-}+{-# LANGUAGE OverloadedStrings #-}++module Spark.IO.JsonSpec where++import Test.Hspec+import Data.Aeson(encode)+import qualified Data.ByteString.Lazy+-- import System.IO++import Spark.Core.Context+import Spark.Core.Types+import Spark.Core.Row+import Spark.Core.Functions+import Spark.Core.Column+import Spark.IO.Inputs+import Spark.Core.IntegrationUtilities+import Spark.Core.SimpleAddSpec(run)++spec :: Spec+spec = do+ describe "Read a json file" $ do+ run "simple read" $ do+ let xs = [TestStruct7 "x"]+ let js = encode xs+ _ <- Data.ByteString.Lazy.writeFile "/tmp/x.json" js+ let dt = unSQLType (buildType :: SQLType TestStruct7)+ let df = json' dt "/tmp/x.json"+ let c = collect' (asCol' df)+ c1 <- exec1Def' c+ c1 `shouldBe` rowArray [rowArray [StringElement "x"]]+ c2 <- exec1Def' c+ c2 `shouldBe` rowArray [rowArray [StringElement "x"]]+ run "simple inference" $ do+ let xs = [TestStruct7 "x"]+ let js = encode xs+ _ <- Data.ByteString.Lazy.writeFile "/tmp/x.json" js+ df <- execStateDef $ jsonInfer "/tmp/x.json"+ let c = collect' (asCol' df)+ c1 <- exec1Def' c+ c1 `shouldBe` rowArray [rowArray [StringElement "x"]]
+ test-integration/Spark/IO/StampSpec.hs view
@@ -0,0 +1,28 @@+{-+let s = "s"++createSparkSessionDef $ defaultConf { confRequestedSessionName = Data.Text.pack s }++execStateDef (checkDataStamps [HdfsPath (Data.Text.pack "/tmp/")])++-}++module Spark.IO.StampSpec where++import Test.Hspec++-- import Spark.Core.Context+-- import Spark.Core.Types+-- import Spark.Core.Row+-- import Spark.Core.Functions+-- import Spark.Core.Column+-- import Spark.IO.Inputs+-- import Spark.Core.IntegrationUtilities+import Spark.Core.SimpleAddSpec(run)++spec :: Spec+spec = do+ describe "Read a json file" $ do+ run "simple read" $ do+ let x = 1 :: Int+ x `shouldBe` x
+ test-integration/Spec.hs view
@@ -0,0 +1,2 @@+-- Not working???+{-# OPTIONS_GHC -F -pgmF hspec-discover #-}
+ test/Spark/Core/ColumnSpec.hs view
@@ -0,0 +1,66 @@+{-# LANGUAGE OverloadedStrings #-}++module Spark.Core.ColumnSpec where++import Test.Hspec++import Spark.Core.Column+import Spark.Core.Dataset+import Spark.Core.Functions+import Spark.Core.Types+import Spark.Core.ColumnFunctions+import Spark.Core.Internal.Utilities++data Z+data Y++myScaler :: Column ref Double -> Column ref Double+myScaler col =+ let cnt = asDouble (countCol col)+ m = sumCol col / cnt+ centered = col .- m+ stdDev = sumCol (centered * centered) / cnt+ in centered ./ stdDev+++spec :: Spec+spec = do+ describe "ColumnSpec: ensure rules compile correctly" $ do+ let ds = dataset [(1,2)] :: Dataset (Int, Int)+ let c1 = ds // _1+ let c2 = ds // _2+ let c1' = untypedCol c1+ let c2' = untypedCol c2+ let i1 = 3 :: Int+ let o1 = constant 4 :: LocalData Int+ let o2 = 5 :: LocalData Int+ let o1' = asLocalObservable o1+ let o2' = asLocalObservable o2+ it "+ should not blow up" $ do+ let z1 = c1 + c2+ let z2 = c1' + c2'+ let z3 = c1 + 1+ let z4 = 1 + c1+ 'a' `shouldBe` 'a'+ it ".+ should not blow up with colums" $ do+ let z1 = c1 .+ c2+ let z2 = c1' .+ c2'+ let z3 = c1 .+ c2'+ let z4 = c1' .+ c2+ let z5 = c1 .+ o1+ let z6 = c1 .+ o1'+ 'a' `shouldBe` 'a'+ it "simple aggregations" $ do+ let c3 = c1 + (c2 .+ sumCol c2)+ let ds2 = pack1 c3+ nodeType ds2 `shouldBe` (buildType :: SQLType Int)+ it "mean" $ do+ let ds' = dataset [1, 2] :: Dataset Double+ let c = asCol ds'+ let cnt = asDouble (countCol c)+ let m = traceHint "m=" $ sumCol c / cnt+ let centered = c .- m+ let stdDev = sumCol (centered * centered) / cnt+ let scaled = traceHint "scaled=" $ centered ./ stdDev+ let ds2 = pack1 scaled+ nodeType ds2 `shouldBe` (buildType :: SQLType Double)
+ test/Spark/Core/ContextSpec.hs view
@@ -0,0 +1,17 @@+++module Spark.Core.ContextSpec where++import Test.Hspec++import Spark.Core.Functions++spec :: Spec+spec = do+ describe "Basic routines to get something out" $ do+ it "should print a node" $ do+ let x = dataset ([1 ,2, 3, 4]::[Int])+ x `shouldBe` x+ -- b = nodeToBundle (untyped x) in+ -- trace (pretty b) $+ -- 1 `shouldBe` 1
+ test/Spark/Core/DatasetSpec.hs view
@@ -0,0 +1,70 @@+{-# LANGUAGE OverloadedStrings #-}++module Spark.Core.DatasetSpec where++import qualified Data.Text as T+import Test.Hspec+import qualified Data.Vector as V++import Spark.Core.Dataset+import Spark.Core.Functions+import Spark.Core.Column+import Spark.Core.StructuresInternal+import Spark.Core.Internal.ContextInternal+import Spark.Core.Internal.Utilities+import Spark.Core.Internal.DAGStructures+import Spark.Core.Internal.ComputeDag++nName :: String -> NodeName+nName = NodeName . T.pack++spec :: Spec+spec = do+ describe "create a dataframe" $ do+ it "should not explode" $+ let x = dataset ([1 ,2, 3, 4]::[Int]) in+ nodeName x `shouldBe` nName "distributedliteral_c87697"++ it "renaming should work" $+ let x = dataset ([1 ,2, 3]::[Int]) @@ "ds1" in+ nodeName x `shouldBe` nName "ds1"++ describe "check localset" $ do+ it "should not explode" $+ let x = dataset ([1 ,2, 3]::[Int]) in+ nodeName x `shouldBe` nName "distributedliteral_1ba31e"++ it "renaming should work" $+ let x = dataset ([1 ,2, 3]::[Int]) @@ "ds1" in+ nodeName x `shouldBe` nName "ds1"++ describe "column syntax" $+ it "should not explode" $ do+ let ds = dataset ([1 ,2, 3]::[Int])+ let c1 = ds/-"c1"+ c1 `shouldBe` c1++ describe "Logical dependencies" $ do+ it "should work" $ do+ let ds = dataset ([1 ,2, 3, 4]::[Int])+ let ds1 = dataset ([1]::[Int]) `depends` [untyped ds]+ let g = traceHint (T.pack "g=") $ computeGraphToGraph $ forceRight $ buildComputationGraph ds1+ V.length (gVertices g) `shouldBe` 2+++-- describe "simple test" $ do+-- it "the type should match" $ do+-- let+-- n1 = constant "xxx"+-- n = NodeType $ T.pack "org.spark.Constant" in+-- (nodeOp n1) `shouldBe` n++-- it "no name" $ do+-- let n1 = constant "xxx"+-- t = NodeName $ T.pack "org.spark.Constant" in+-- (nodeName n1) `shouldBe` t++-- it "some name" $ do+-- let n1 = constant "xxx" @@ "name"+-- t = NodeName $ T.pack "name" in+-- (nodeName n1) `shouldBe` t
+ test/Spark/Core/Internal/CachingSpec.hs view
@@ -0,0 +1,169 @@+{-# LANGUAGE MultiParamTypeClasses #-}+{-# LANGUAGE OverloadedStrings #-}++module Spark.Core.Internal.CachingSpec where++import Test.Hspec++import qualified Data.ByteString.Char8 as C8+import Data.Either(isLeft, isRight)+import Control.Arrow((&&&))+import Data.Text(Text)+import Data.Foldable(toList)+import Formatting++import Spark.Core.Try+import Spark.Core.Functions+import Spark.Core.Column+import Spark.Core.ColumnFunctions+import Spark.Core.Internal.Caching+-- Required for instance resolution+import Spark.Core.StructuresInternal()+import Spark.Core.Internal.Client(LocalSessionId(..))+import Spark.Core.Internal.DAGStructures+import Spark.Core.Internal.DAGFunctions+import Spark.Core.Internal.DatasetStructures+import Spark.Core.Internal.Utilities+import Spark.Core.Internal.ContextStructures+import Spark.Core.Internal.ContextInternal+import Spark.Core.Internal.Pruning(emptyNodeCache)++data TestType = AutocacheNode | CacheNode | UncacheNode | Dataset | Row deriving (Eq, Show)++data TestNode = TestNode { tnId :: VertexId, tnType :: TestType, tnParents :: [(StructureEdge, TestNode)] } deriving (Eq)++instance Show TestNode where+ show v = "TestNode(" ++ (C8.unpack . unVertexId. tnId $ v) ++ ")"++nid :: String -> VertexId+nid = VertexId . C8.pack++node :: String -> TestType -> [TestNode] -> TestNode+node s tp p = TestNode (VertexId (C8.pack s)) tp ((const ParentEdge &&& id) <$> p)++instance GraphVertexOperations TestNode where+ vertexToId = tnId+ expandVertexAsVertices x = snd <$> tnParents x++instance GraphOperations TestNode StructureEdge where+ expandVertex tn = tnParents tn++acGen :: AutocacheGen TestNode+acGen =+ let deriveUncache' (Vertex (VertexId x) (TestNode _ AutocacheNode _)) =+ let vid' = VertexId $ C8.pack . (++ "_uncache") . C8.unpack $ x+ in Vertex vid' (TestNode vid' UncacheNode [])+ deriveUncache' x = error (show x)+ deriveIdentity' (Vertex (VertexId x) (TestNode _ r _)) =+ let vid' = VertexId $ C8.pack . (++ "_identity") . C8.unpack $ x+ in Vertex vid' (TestNode vid' r [])+ in AutocacheGen {+ deriveUncache = deriveUncache',+ deriveIdentity = deriveIdentity'+ }++expandFun :: TestNode -> CacheTry NodeCachingType+expandFun n = case (tnType n, tnParents n) of+ (AutocacheNode, [_]) -> pure $ AutocacheOp (tnId n)+ (AutocacheNode, x) -> Left $ sformat ("Node: "%shown%": expected one parent for autocaching, got "%shown) n x+ (CacheNode, [_]) -> pure $ CacheOp (tnId n)+ (CacheNode, x) -> Left $ sformat ("Node: "%shown%": expected one parent for caching, got "%shown) n x+ (UncacheNode, [(ParentEdge, x)]) -> pure $ UncacheOp (tnId n) (tnId x)+ (UncacheNode, x) -> Left $ sformat ("Node: "%shown%": Expected one parent for uncaching, got "%shown) n x+ (Dataset, _) -> Right Through+ (Row, _) -> Right Stop++errors :: TestNode -> CacheTry [CachingFailure]+errors tn = do+ g <- buildGraph tn :: Either Text (Graph TestNode StructureEdge)+ checkCaching (graphMapEdges g (const ParentEdge)) expandFun++errors' :: TestNode -> CacheTry (Graph TestNode StructureEdge)+errors' tn = do+ g <- buildGraph tn :: Either Text (Graph TestNode StructureEdge)+ fillAutoCache expandFun acGen g++intErrors :: LocalData a -> Try ComputeGraph+intErrors ld =+ let cg = buildComputationGraph ld+ in performGraphTransforms emptySession =<< cg++emptySession :: SparkSession+emptySession = SparkSession c (LocalSessionId "id") 3 emptyNodeCache+ where c = SparkSessionConf "end_point" (negate 1) 10 "session_name" True++spec :: Spec+spec = do+ describe "Caching operations" $ do+ it "missing parent node" $ do+ let n1 = node "1" CacheNode []+ errors n1 `shouldSatisfy` isLeft+ it "caching: parent node" $ do+ let n0 = node "0" Dataset []+ let n1 = node "1" CacheNode [n0]+ errors n1 `shouldBe` Right []+ it "uncaching: missing parent node" $ do+ let n1 = node "1" UncacheNode []+ errors n1 `shouldSatisfy` isLeft+ it "uncaching: parent node" $ do+ let n0 = node "0" Dataset []+ let n1 = node "1" CacheNode [n0]+ let n2 = node "2" CacheNode [n1]+ errors n2 `shouldBe` Right []+ it "too many nodes for uncaching" $ do+ let n0 = node "0" Dataset []+ let n1 = node "1" CacheNode [n0]+ let n2 = node "2" UncacheNode [n1, n2]+ errors n2 `shouldSatisfy` isLeft+ it "access after uncaching" $ do+ let n0 = node "0" Dataset []+ let n1 = node "1" CacheNode [n0]+ let n2 = node "2" UncacheNode [n1]+ let n3 = node "3" Dataset [n1, n2]+ errors n3 `shouldBe` Right [CachingFailure (nid "1") (nid "2") (nid "3")]+ it "ambigous access after uncaching" $ do+ let n0 = node "0" Dataset []+ let n1 = node "1" CacheNode [n0]+ let n2 = node "2" UncacheNode [n1]+ let n3 = node "3" Dataset [n1]+ let n4 = node "4" Dataset [n3, n2]+ errors n4 `shouldBe` Right [CachingFailure (nid "1") (nid "2") (nid "3")+ ,CachingFailure (nid "1") (nid "2") (nid "4")]+ describe "Autocaching operations" $ do+ it "missing parent node" $ do+ let n1 = node "1" AutocacheNode []+ let g = traceHint "g=" (errors' n1)+ g `shouldSatisfy` isLeft+ it "auto-uncaching with no child should not create uncaching" $ do+ let n0 = node "0" Dataset []+ let n1 = node "1" AutocacheNode [n0]+ let g = traceHint "g=" (errors' n1)+ g `shouldSatisfy` isRight+ ((length . toList . gVertices) <$> g) `shouldBe` Right 2+ it "access after uncaching" $ do+ let n0 = node "0" Dataset []+ let n1 = node "1" AutocacheNode [n0]+ let n2 = node "2" Row [n1]+ let g = traceHint "g=" (errors' n2)+ g `shouldSatisfy` isRight+ ((length . toList . gVertices) <$> g) `shouldBe` Right 5+ it "access after and scoping" $ do+ let n0 = node "0" Dataset []+ let n1 = node "1" AutocacheNode [n0]+ let n2a = node "2a" Row [n1]+ let n2b = node "2b" Row [n1]+ let n3 = node "3" Row [n2a, n2b]+ let g = traceHint "g=" (errors' n3)+ g `shouldSatisfy` isRight+ ((length . toList . gVertices) <$> g) `shouldBe` Right 8+ describe "Autocaching integration tests" $ do+ it "test 1" $ do+ let l = [1,2,3] :: [Int]+ let ds = dataset l+ let ds' = autocache ds+ let c1 = asCol ds'+ let s1 = sumCol c1+ let s2 = count ds'+ let x = s1 + s2+ let g = traceHint "g=" (intErrors x)+ g `shouldSatisfy` isRight
+ test/Spark/Core/Internal/DAGFunctionsSpec.hs view
@@ -0,0 +1,113 @@+{-# LANGUAGE DeriveAnyClass #-}+{-# LANGUAGE ScopedTypeVariables #-}+{-# LANGUAGE MultiParamTypeClasses #-}++-- :script test/Spark/Core/Internal/PathsSpec.hs+module Spark.Core.Internal.DAGFunctionsSpec where++import Test.Hspec+import qualified Data.Map.Strict as M+import qualified Data.Vector as V+import qualified Data.ByteString.Char8 as C8+import Control.Arrow((&&&))+import Data.Foldable(toList)++import Spark.Core.Internal.DAGStructures+import Spark.Core.Internal.DAGFunctions+import Spark.Core.Internal.Utilities++data MyV = MyV {+ mvId :: VertexId,+ mvParents :: [MyV]+} deriving (Eq)++id2Str :: VertexId -> String+id2Str = C8.unpack . unVertexId++instance Show MyV where+ show v = "MyV(" ++ (id2Str . mvId $ v) ++ ")"+++instance GraphVertexOperations MyV where+ vertexToId = mvId+ expandVertexAsVertices = mvParents++instance GraphOperations MyV () where+ expandVertex = ((const () &&& id) <$>) . mvParents++myv :: String -> [MyV] -> MyV+myv s = MyV (VertexId (C8.pack s))++expandNodes :: MyV -> DagTry [String]+expandNodes vx =+ let tg = buildGraph vx :: DagTry (Graph MyV ())+ in (id2Str . mvId . vertexData <$>) . toList . gVertices <$> tg++-- edges: from -> to+expandEdges :: MyV -> DagTry [(String, String)]+expandEdges vx =+ let tg = buildGraph vx :: DagTry (Graph MyV ())+ in tg <&> \g ->+ concat $ M.assocs (gEdges g) <&> \(vid, v) ->+ (C8.unpack . unVertexId . vertexId . veEndVertex &&&+ C8.unpack . unVertexId . const vid) <$> V.toList v++spec :: Spec+spec = do+ describe "Tests on paths" $ do+ it "no parent" $ do+ let v0 = myv "v0" []+ expandNodes v0 `shouldBe` Right ["v0"]+ it "common parent" $ do+ let v0 = myv "v0" []+ let v0' = myv "v0" []+ let v1 = myv "v1" [v0, v0']+ expandEdges v1 `shouldBe` Right [("v0", "v1"), ("v0", "v1")]+ it "diamond" $ do+ let va = myv "va" []+ let va' = myv "va" []+ let v0 = myv "v0" [va]+ let v0' = myv "v0" [va']+ let v1 = myv "v1" [v0, v0']+ expandEdges v1 `shouldBe` Right [("va", "v0"), ("v0", "v1"), ("v0", "v1")]+ it "simple sources" $ do+ let v0 = myv "v0" []+ let v1 = myv "v1" [v0]+ let tg = buildGraph v1 :: DagTry (Graph MyV ())+ let g = forceRight tg+ mvId . vertexData <$> graphSources g `shouldBe` [mvId v1]+ it "simple sinks" $ do+ let v0 = myv "v0" []+ let v1 = myv "v1" [v0]+ let tg = buildGraph v1 :: DagTry (Graph MyV ())+ let g = forceRight tg+ mvId . vertexData <$> graphSinks g `shouldBe` [mvId v0]+ it "longer sources" $ do+ let v0 = myv "v0" []+ let v1 = myv "v1" [v0]+ let v2 = myv "v2" [v1]+ let tg = buildGraph v2 :: DagTry (Graph MyV ())+ let g = forceRight tg+ mvId . vertexData <$> graphSources g `shouldBe` [mvId v2]+ it "longer sinks" $ do+ let v0 = myv "v0" []+ let v1 = myv "v1" [v0]+ let v2 = myv "v2" [v1]+ let tg = buildGraph v2 :: DagTry (Graph MyV ())+ let g = forceRight tg+ mvId . vertexData <$> graphSinks g `shouldBe` [mvId v0]+ describe "building DAGs" $ do+ it "2 nodes" $ do+ let v0 = myv "v0" []+ let v1 = myv "v1" [v0]+ let v2 = myv "v2" [v1]+ let l = forceRight $ buildVertexList v2+ id2Str . mvId <$> l `shouldBe` ["v0", "v1", "v2"]+ it "triangle" $ do+ let v0 = myv "v0" []+ let v1 = myv "v1" [v0]+ let v2 = myv "v2" [v0, v1]+ let l = forceRight $ buildVertexList v2+ -- The return order should be in lexicographic order+ -- (which is unique in this case).+ id2Str . mvId <$> l `shouldBe` ["v0", "v1", "v2"]
+ test/Spark/Core/Internal/GroupsSpec.hs view
@@ -0,0 +1,56 @@+{-# LANGUAGE OverloadedStrings #-}+{-# LANGUAGE DeriveGeneric #-}+{-# LANGUAGE MultiParamTypeClasses #-}++module Spark.Core.Internal.GroupsSpec where++import Data.Text(Text)+import Test.Hspec+import GHC.Generics+import Data.Either(isRight)++import Spark.Core.Functions+import Spark.Core.ColumnFunctions+import Spark.Core.Dataset+import Spark.Core.Column+import Spark.Core.Row+import Spark.Core.Types+import Spark.Core.Internal.Groups+++data MyPair = MyPair {+ myKey :: Text,+ myVal :: Int } deriving (Generic, Show)++myKey' :: StaticColProjection MyPair Text+myKey' = unsafeStaticProjection buildType "myKey"+myVal' :: StaticColProjection MyPair Int+myVal' = unsafeStaticProjection buildType "myVal"+instance SQLTypeable MyPair+instance ToSQL MyPair++-- The tests are really light for now, and just check that the code passes the+-- dynamic type checker.+spec :: Spec+spec = do+ describe "typed grouping tests" $ do+ let ds = dataset [MyPair "1" 1, MyPair "2" 2]+ let keys = ds // myKey'+ let values = ds // myVal'+ let g = groupByKey keys values+ let sqlt1 = buildType :: SQLType MyPair+ it "group" $ do+ let tds2 = castType sqlt1 (groupAsDS g)+ tds2 `shouldSatisfy` isRight+ it "map group" $ do+ let g2 = g `mapGroup` \c -> c + c+ let tds2 = castType sqlt1 (groupAsDS g2)+ tds2 `shouldSatisfy` isRight+ it "simple reduce" $ do+ let ds2 = g `aggKey` sumCol+ let tds3 = castType sqlt1 ds2+ tds3 `shouldSatisfy` isRight+ it "complex reduce" $ do+ let ds2 = g `aggKey` \c -> sumCol (c + c)+ let tds3 = castType sqlt1 ds2+ tds3 `shouldSatisfy` isRight
+ test/Spark/Core/Internal/LocalDataFunctionsSpec.hs view
@@ -0,0 +1,18 @@++module Spark.Core.Internal.LocalDataFunctionsSpec where++import Test.Hspec++import Spark.Core.Dataset+import Spark.Core.Functions()++spec :: Spec+spec = do+ describe "Arithmetic operations on local data (integers)" $ do+ it "ints" $ do+ let x1 = 1 :: LocalData Int+ let x2 = 2 :: LocalData Int+ let y1 = x1 + x2+ let y2 = x1 `div` x2+ (y2 `shouldBe` y2)+ (y1 `shouldBe` y1)
+ test/Spark/Core/Internal/OpFunctionsSpec.hs view
@@ -0,0 +1,33 @@+{-# LANGUAGE DeriveAnyClass #-}+{-# LANGUAGE DeriveGeneric #-}+{-# LANGUAGE OverloadedStrings #-}+{-# LANGUAGE ScopedTypeVariables #-}+{-# LANGUAGE QuasiQuotes #-}++module Spark.Core.Internal.OpFunctionsSpec where++import Data.Aeson+import Test.Hspec+import Text.RawString.QQ++import Spark.Core.Functions+import Spark.Core.Internal.OpFunctions+import Spark.Core.Internal.DatasetFunctions+++spec :: Spec+spec = do+ describe "extraNodeOpData" $ do+ it "should have the content of a constant dataset" $ do+ let l = [1,2,3] :: [Int]+ let res :: Maybe Value+ res = decode+ ([r|{"content": [1,2,3],+ "cellType" : {+ "dt": "integer",+ "nullable": false+ }+ }|])+ let ds = dataset l+ let d = extraNodeOpData . nodeOp $ ds+ Just d `shouldBe` res
+ test/Spark/Core/Internal/PathsSpec.hs view
@@ -0,0 +1,188 @@+{-# LANGUAGE DeriveAnyClass #-}+{-# LANGUAGE DeriveGeneric #-}+{-# LANGUAGE ScopedTypeVariables #-}++-- :script test/Spark/Core/Internal/PathsSpec.hs+module Spark.Core.Internal.PathsSpec where++import Test.Hspec+import qualified Data.Map.Strict as M+import qualified Data.Set as S+import qualified Data.ByteString.Char8 as C8+import qualified Data.Text as T++import Spark.Core.StructuresInternal+import Spark.Core.Functions+import Spark.Core.Dataset+import Spark.Core.Internal.Paths+import Spark.Core.Internal.DAGStructures+import Spark.Core.Internal.DAGFunctions+import Spark.Core.Internal.ComputeDag+import Spark.Core.Internal.PathsUntyped+import Spark.Core.Internal.Utilities+import Spark.Core.Internal.DatasetFunctions+import Spark.Core.Internal.DatasetStructures++data MyV = MyV {+ mvId :: VertexId,+ mvLogical :: [MyV],+ mvParents :: [MyV]+} deriving (Eq)++instance Show MyV where+ show v = "MyV(" ++ (C8.unpack . unVertexId . mvId $ v) ++ ")"+++assignPaths :: UntypedNode -> [UntypedNode]+assignPaths n =+ let cgt = buildCGraph n :: DagTry (ComputeDag UntypedNode NodeEdge)+ cg = forceRight cgt+ acgt = assignPathsUntyped cg+ ncg = forceRight acgt+ in graphDataLexico . tieNodes $ ncg+++instance GraphVertexOperations MyV where+ vertexToId = mvId+ expandVertexAsVertices = mvParents++myv :: String -> [MyV] -> [MyV] -> MyV+myv s logical inner = MyV (VertexId (C8.pack s)) logical inner++myvToVertex :: MyV -> Vertex MyV+myvToVertex x = Vertex (mvId x) x++buildScopes :: [MyV] -> Scopes+buildScopes l = iGetScopes0 l' fun where+ l' = myvToVertex <$> l+ fun vx = ParentSplit {+ psLogical = myvToVertex <$> (mvLogical . vertexData $ vx),+ psInner = myvToVertex <$> (mvParents . vertexData $ vx) }++simple :: [(Maybe String, [String])] -> Scopes+simple [] = M.empty+simple ((ms, ss) : t) =+ let+ key = VertexId . C8.pack <$> ms+ vals = VertexId . C8.pack <$> ss+ new = M.singleton key (S.fromList vals)+ in mergeScopes new (simple t)++gatherings :: [(String, [[String]])] -> M.Map VertexId [[VertexId]]+gatherings [] = M.empty+gatherings ((key, paths) : t) =+ let+ k = VertexId . C8.pack $ key+ ps = (VertexId . C8.pack <$>) <$> paths+ new = M.singleton k ps+ in M.unionWith (++) new (gatherings t)++gatherPaths' :: [MyV] -> M.Map VertexId [[VertexId]]+gatherPaths' = gatherPaths . buildScopes++spec :: Spec+spec = do+ describe "Tests on paths" $ do+ it "nothing" $ do+ buildScopes [] `shouldBe` simple []+ it "no parent" $ do+ let v0 = myv "v0" [] []+ let res = [ (Nothing, ["v0"]), (Just "v0", []) ]+ buildScopes [v0] `shouldBe` simple res+ it "one logical parent" $ do+ let v0 = myv "v0" [] []+ let v1 = myv "v1" [v0] []+ let res = [ (Nothing, ["v0", "v1"])+ , (Just "v1", [])+ , (Just "v0", []) ]+ buildScopes [v1, v0] `shouldBe` simple res+ it "one inner parent" $ do+ let v0 = myv "v0" [] []+ let v1 = myv "v1" [] [v0]+ let res = [ (Nothing, ["v1"])+ , (Just "v1", ["v0"])+ , (Just "v0", []) ]+ buildScopes [v1, v0] `shouldBe` simple res+ it "logical scoping over a parent" $ do+ let v0 = myv "v0" [] []+ let v1 = myv "v1" [v0] []+ let v2 = myv "v2" [v0] [v1]+ let res = [ (Nothing, ["v0", "v2"])+ , (Just "v0", [])+ , (Just "v1", [])+ , (Just "v2", ["v1"]) ]+ buildScopes [v2] `shouldBe` simple res+ it "common ancestor" $ do+ let top = myv "top" [] []+ let inner = myv "inner" [top] []+ let v1 = myv "v1" [top] [inner]+ let v2 = myv "v2" [top] [inner]+ let res = [ (Nothing, ["top", "v1", "v2"])+ , (Just "inner", [])+ , (Just "top", [])+ , (Just "v1", ["inner"])+ , (Just "v2", ["inner"]) ]+ buildScopes [v1, v2] `shouldBe` simple res+ it "common ancestor, unbalanced" $ do+ let top = myv "top" [] []+ let inner = myv "inner" [top] []+ let v1 = myv "v1" [top] [inner]+ let v2 = myv "v2" [] [inner]+ let res = [ (Nothing, ["top", "v1", "v2"])+ , (Just "inner", [])+ , (Just "top", [])+ , (Just "v1", ["inner"])+ , (Just "v2", ["inner", "top"]) ]+ buildScopes [v1, v2] `shouldBe` simple res+ describe "Path gatherings" $ do+ it "nothing" $ do+ gatherPaths' [] `shouldBe` gatherings []+ it "no parent" $ do+ let v0 = myv "v0" [] []+ let res = [("v0", [[]])]+ gatherPaths' [v0] `shouldBe` gatherings res+ it "one logical parent" $ do+ let v0 = myv "v0" [] []+ let v1 = myv "v1" [v0] []+ let res = [ ("v1", [[]])+ , ("v0", [[]])]+ gatherPaths' [v1] `shouldBe` gatherings res+ it "one inner parent" $ do+ let v0 = myv "v0" [] []+ let v1 = myv "v1" [] [v0]+ let res = [ ("v1", [[]])+ , ("v0", [["v1"]])]+ gatherPaths' [v1] `shouldBe` gatherings res+ it "logical scoping over a parent" $ do+ let v0 = myv "v0" [] []+ let v1 = myv "v1" [v0] []+ let v2 = myv "v2" [v0] [v1]+ let res = [ ("v0", [[]])+ , ("v1", [["v2"]])+ , ("v2", [[]]) ]+ gatherPaths' [v2] `shouldBe` gatherings res+ it "common ancestor" $ do+ let top = myv "top" [] []+ let inner = myv "inner" [top] []+ let v1 = myv "v1" [top] [inner]+ let v2 = myv "v2" [top] [inner]+ let res = [ ("inner", [["v1"], ["v2"]])+ , ("top", [[]])+ , ("v1", [[]])+ , ("v2", [[]]) ]+ gatherPaths' [v1, v2] `shouldBe` gatherings res+ describe "Real paths" $ do+ it "simple test" $ do+ let c0 = constant (1 :: Int) @@ "c0"+ let c1 = identity c0 @@ "c1"+ let c2 = identity c1 `logicalParents` [untyped c0] @@ "c2"+ nodeId <$> nodeParents c1 `shouldBe` [nodeId c0]+ nodeId <$> nodeParents c2 `shouldBe` [nodeId c1]+ let withParents = T.unpack . catNodePath . nodePath <$> assignPaths (untyped c2)+ withParents `shouldBe` ["c0", "c2/c1", "c2"]+ it "simple test 2" $ do+ let ds = dataset ([1 ,2, 3, 4]::[Int]) @@ "ds"+ let c = count ds @@ "c"+ let c2 = (c + (identity c @@ "id")) `logicalParents` [untyped ds] @@ "c2"+ let withParents = T.unpack . catNodePath . nodePath <$> assignPaths (untyped c2)+ withParents `shouldBe` ["ds", "c2/c","c2/id","c2"]
+ test/Spark/Core/Internal/RowUtilsSpec.hs view
@@ -0,0 +1,40 @@+{-# LANGUAGE DeriveAnyClass #-}+{-# LANGUAGE OverloadedStrings #-}+{-# LANGUAGE ScopedTypeVariables #-}++module Spark.Core.Internal.RowUtilsSpec where++import Data.Aeson+import Data.Maybe(fromJust)+import Test.Hspec+import Data.ByteString.Lazy(ByteString)+import qualified Data.Vector as V+import Data.Either(isRight)++import Spark.Core.Types+import Spark.Core.Row+import Spark.Core.Internal.TypesFunctions+import Spark.Core.Internal.RowGenericsFrom+import Spark.Core.Internal.TypesStructuresRepr(DataTypeElementRepr)++fun :: ByteString -> DataType -> Cell -> IO ()+fun js dt cell2 =+ let+ mval = decode js :: Maybe Value+ val = fromJust mval+ cellt = jsonToCell dt val+ in cellt `shouldBe` (Right cell2)+++spec :: Spec+spec = do+ describe "JSON -> Row" $ do+ it "ints" $ do+ fun "2" intType (IntElement 2)+ it "[ints]" $ do+ fun "[2]" (arrayType' intType) (RowArray (V.singleton (IntElement 2)))+ describe "Decoding data types" $ do+ it "should decode DataTypeElementRepr" $ do+ let x = rowArray [rowArray [StringElement "ts3f1"],BoolElement True,IntElement 1,IntElement 0]+ let elt = cellToValue x :: TryS DataTypeElementRepr+ elt `shouldSatisfy` isRight
+ test/Spark/Core/PathSpec.hs view
@@ -0,0 +1,42 @@+{-# LANGUAGE ExistentialQuantification #-}+{-# LANGUAGE FlexibleInstances #-}++module Spark.Core.PathSpec where++import Data.Maybe(fromJust)+import Test.Hspec++import Spark.Core.Functions+import Spark.Core.Dataset++fun1 :: LocalData Int+fun1 =+ let m1 = constant (1::Int)+ m2 = constant (2::Int) in+ constant (3::Int)+ `logicalParents` [untyped m1, untyped m2]+ `parents` []+++fun2 :: LocalData Int -> LocalData Int+fun2 ld1 = let+ m1 = constant (1 :: Int) `parents` [untyped ld1] @@ "m1"+ in+ constant (3 :: Int)+ `logicalParents` [untyped m1]+ `parents` [untyped ld1]+ @@ "c2"++-- fun3 :: LocalData Int -> LocalData Int+-- fun3 ld = ld + 3++spec :: Spec+spec = do+ describe "Tests with nodes" $ do+ it "should get a node" $ do+ let n1 = fun1+ let l = fromJust $ nodeLogicalParents n1+ (length l) `shouldBe` 2+ -- it "should work with ints" $ do+ -- let n2 = (fun3 4) @@ "" in+ -- (length $ nodeDependencies n2) `shouldBe` 2
+ test/Spark/Core/ProjectionsSpec.hs view
@@ -0,0 +1,113 @@+{-# LANGUAGE ExistentialQuantification #-}+{-# LANGUAGE FlexibleInstances #-}+{-# LANGUAGE FlexibleContexts #-}+{-# LANGUAGE DeriveGeneric #-}+{-# LANGUAGE GeneralizedNewtypeDeriving #-}+{-# LANGUAGE MultiParamTypeClasses #-}+{-# LANGUAGE OverloadedStrings #-}++module Spark.Core.ProjectionsSpec where++import Test.Hspec+import GHC.Generics+import Data.List(isPrefixOf)+import Data.Either(isRight, isLeft)+import qualified Data.Vector as V+import qualified Data.Text as T++import Spark.Core.Functions+import Spark.Core.Dataset+import Spark.Core.Column+import Spark.Core.Row+import Spark.Core.Types+import Spark.Core.Try+import Spark.Core.Internal.Utilities+import Spark.Core.Internal.TypesFunctions+++data Tree = Tree {+ treeId :: Int,+ treeWidth :: Int,+ treeHeight :: Int } deriving (Generic, Show)++treeId' :: StaticColProjection Tree Int+treeId' = unsafeStaticProjection buildType "treeId"+treeWidth' :: StaticColProjection Tree Int+treeWidth' = unsafeStaticProjection buildType "treeWidth"+instance SQLTypeable Tree+instance ToSQL Tree++newtype MyId = MyId Int deriving (Generic, Show, Num)+instance SQLTypeable MyId+instance ToSQL MyId++newtype Height = Height Int deriving (Generic, Num, Show)+instance SQLTypeable Height+instance ToSQL Height++data STree = STree {+ sTreeId :: MyId,+ sTreeWidth :: Height,+ sTreeHeight :: Int } deriving (Generic, Show)++instance SQLTypeable STree+instance ToSQL STree+sTreeId' :: StaticColProjection STree MyId+sTreeId' = unsafeStaticProjection buildType "sTreeId"+sTreeWidth' :: StaticColProjection STree Height+sTreeWidth' = unsafeStaticProjection buildType "sTreeWidth"+instance TupleEquivalence STree (MyId, Height, Int) where+ tupleFieldNames = NameTuple ["sTreeId", "sTreeWidth", "sTreeHeight"]++rawData :: [(Int, Int, Int)]+rawData = [(1, 3, 2)]++spec :: Spec+spec = do+ let ds = dataset [Tree 1 3 2]+ -- The untyped elements+ let dt = structType [structField (T.pack "treeId") intType, structField (T.pack "treeWidth") intType, structField (T.pack "treeHeight") intType]+ let fun (id', height, width) = RowArray $ V.fromList [IntElement id', IntElement height, IntElement width]+ let df1 = traceHint (T.pack "df1=") $ dataframe dt (fun <$> rawData)+ let ds1 = traceHint (T.pack "ds1=") $ forceRight (asDS df1) :: Dataset Tree+ describe "Simple projection demos" $ do+ it "should get a node" $ do+ ds `shouldBe` ds1+ it "Failing dynamic projection on dataframe" $ do+ df1/-"xx" `shouldSatisfy` isLeft+ it "Failing dynamic projection on dataset" $ do+ ds1/-"xx" `shouldSatisfy` isLeft+ it "Basic arithmetic on DS cols" $ do+ let c1 = ds1//treeWidth'+ let c2 = (c1 + c1)+ (show c2) `shouldSatisfy` ("treeWidth + treeWidth{int}" `isPrefixOf`)+ it "Basic arithmetic on DF cols" $ do+ let c1 = df1 // treeWidth'+ let c2 = c1 + c1+ (show c2) `shouldSatisfy` ("Right treeWidth + treeWidth{int}" `isPrefixOf`)+ it "Construction of ds2" $ do+ let str = struct' [ (df1/-"treeId") @@ "sTreeId",+ (df1/-"treeWidth") @@ "sTreeWidth",+ (df1/-"treeHeight") @@ "sTreeHeight"]+ let df2 = pack' str+ let ds2 = traceHint (T.pack "ds2=") $ asDS df2 :: Try (Dataset STree)+ ds2 `shouldSatisfy` isRight+ it "Static construction of ds2" $ do+ let ds2 = do+ idCol <- castCol' (buildType::SQLType MyId) (df1/-"treeId")+ widthCol <- castCol' (buildType::SQLType Height) (df1/-"treeWidth")+ heightCol <- castCol' (buildType::SQLType Int) (df1/-"treeWidth")+ let s = pack (idCol, widthCol, heightCol) :: Dataset STree+ return $ traceHint (T.pack "ds2=") s+ ds2 `shouldSatisfy` isRight+ it "Basic arithmetic on DS cols 1" $ do+ let ds2' = do+ idCol <- castCol' (buildType::SQLType MyId) (df1/-"treeId")+ widthCol <- castCol' (buildType::SQLType Height) (df1/-"treeWidth")+ heightCol <- castCol' (buildType::SQLType Int) (df1/-"treeWidth")+ let s = pack (idCol, widthCol, heightCol) :: Dataset STree+ return $ traceHint (T.pack "ds2=") s+ let ds2 = forceRight ds2'+ let c1 = ds2//sTreeWidth'+ let c2 = c1 + c1+ (show c2) `shouldSatisfy` ("sTreeWidth + sTreeWidth{int}" `isPrefixOf`)
+ test/Spark/Core/RowToSQLSpec.hs view
@@ -0,0 +1,68 @@+{-# LANGUAGE DeriveAnyClass #-}+{-# LANGUAGE DeriveGeneric #-}+{-# LANGUAGE OverloadedStrings #-}+{-# LANGUAGE BangPatterns #-}++module Spark.Core.RowToSQLSpec where++import qualified Data.Vector as V+import GHC.Generics (Generic)+import Test.Hspec++import Spark.Core.Types+import Spark.Core.Row++data TestStruct1 = TestStruct1 {+ ts1f1 :: Int,+ ts1f2 :: Maybe Int } deriving (Show, Eq, Generic, ToSQL, FromSQL)++data TestStruct2 = TestStruct2 { ts2f1 :: [Int] } deriving (Show, Generic, SQLTypeable)++data TestStruct3 = TestStruct3 { ts3f1 :: Int } deriving (Show, Eq, Generic, ToSQL, FromSQL)+data TestStruct4 = TestStruct4 { ts4f1 :: TestStruct3 } deriving (Show, Eq, Generic, ToSQL, FromSQL)++data TestStruct5 = TestStruct5 {+ ts5f1 :: Int,+ ts5f2 :: Int,+ ts5f3 :: TestStruct3+} deriving (Show, Eq, Generic, ToSQL, FromSQL)++newtype TestT1 = TestT1 { unTestT1 :: Int } deriving (Eq, Show, Generic, ToSQL, FromSQL)+++v2c :: (Show a, ToSQL a, FromSQL a, Eq a) => a -> Cell -> IO ()+v2c !x !y = do+ _ <- shouldBe (valueToCell x) y+ _ <- shouldBe (cellToValue y) (Right x)+ return ()++spec :: Spec+spec = do+ describe "Simple type tests" $ do+ it "int" $+ v2c (3 :: Int) (IntElement 3)+ it "int?" $+ v2c (Just 3 :: Maybe Int) (IntElement 3)+ it "int? 2" $+ v2c (Nothing :: Maybe Int) Empty+ it "TestStruct3" $+ v2c (TestStruct3 2) (RowArray $ V.fromList [IntElement 2])+ it "TestStruct4" $+ v2c (TestStruct4 (TestStruct3 3)) $+ (RowArray $ V.fromList [+ RowArray $ V.fromList [IntElement 3]+ ])+ it "TestStruct1 - empty" $+ v2c (TestStruct1 2 Nothing) (RowArray $ V.fromList [IntElement 2, Empty])+ it "TestStruct1 - full" $+ v2c (TestStruct1 2 (Just 4)) (RowArray $ V.fromList [IntElement 2, IntElement 4])+ it "TestStruct5" $+ v2c (TestStruct5 1 2 (TestStruct3 3)) $+ (RowArray $ V.fromList [+ IntElement 1,+ IntElement 2,+ RowArray $ V.fromList [IntElement 3]+ ])+ -- describe "Simple type tests" $ do+ -- it "newtype" $+ -- v2c (TestT1 3) (IntElement 3)
+ test/Spark/Core/SimpleExamplesSpec.hs view
@@ -0,0 +1,75 @@+{-# LANGUAGE DeriveAnyClass #-}+{-# LANGUAGE ScopedTypeVariables #-}+{-# LANGUAGE QuasiQuotes #-}++-- Some small examples that get fully verified.+module Spark.Core.SimpleExamplesSpec where++import Data.Either(isRight)+import Data.Maybe(isJust)+import Test.Hspec+import qualified Data.Text as T+import Text.RawString.QQ++import Spark.Core.Dataset+import Spark.Core.Functions+import Spark.Core.Column+import Spark.Core.ColumnFunctions+import Spark.Core.Internal.DatasetStructures+import Spark.Core.Internal.Utilities(pretty)+import Spark.Core.Internal.OpFunctions(extraNodeOpData)++ds1 :: Dataset Int+ds1 = dataset [1,2,3]++ds2 :: Dataset Double+ds2 = error "ds2"++spec :: Spec+spec = do+ describe "Simple examples" $ do+ it "Precdence of renaming" $ do+ let numbers = asCol ds1+ let s = sumCol numbers+ let numCount = count ds1+ let avg = s `div` numCount @@ "myaverage"+ _cnName avg `shouldSatisfy` isJust+ it "name for simple integers" $ do+ let numbers = asCol ds1+ let s = sumCol numbers+ let numCount = count ds1+ let avg = s `div` numCount @@ "myaverage"+ -- TODO: should it show "value: int" instead?+ -- I think it should show it for distributed nodes only.+ -- SQL is not allowed on observables+ (show avg) `shouldBe` "/myaverage@org.spark.LocalDiv!int"+ describe "pack1" $ do+ it "Extracting and packing one column" $ do+ let numbers = asCol ds1+ let ds1' = pack1 numbers+ (nodeType ds1) `shouldBe` (nodeType ds1')+ describe "pack" $ do+ it "Extracting and packing one column" $ do+ let ds1' = pack' . asCol $ ds1+ (nodeType <$> (asDF ds1)) `shouldBe` (nodeType <$> ds1')+ describe "simple json example" $ do+ it "packing and unpacking one column" $ do+ let ds1' = pack' . asCol $ ds1+ let d' = pretty . extraNodeOpData . nodeOp <$> ds1'+ d' `shouldBe` Right (T.pack "{\"cellType\":{\"dt\":\"integer\",\"nullable\":false},\"content\":[1,2,3]}")+ it "packing and unpacking 2 columns, one with a bad name" $ do+ let col1 = asCol ds1+ let col2 = col1 @@ "other"+ let ds1' = pack' (col1, col2)+ ds1' `shouldSatisfy` isRight -- NOT SURE WHY IT WOULD FAIL+ it "packing and unpacking 2 columns, one with a good name" $ do+ let col1 = asCol ds1 @@ "first"+ let col2 = col1 @@ "second"+ let ds1' = pack' (col1, col2)+ ds1' `shouldSatisfy` isRight+++ -- it "example2" $ do+ -- let numbers = asCol ds2+ -- let avg = (colSum numbers) / (count ds2)+ -- 1 `shouldBe` 1
+ test/Spark/Core/TypesSpec.hs view
@@ -0,0 +1,98 @@+{-# LANGUAGE DeriveAnyClass #-}+{-# LANGUAGE DeriveGeneric #-}+{-# LANGUAGE OverloadedStrings #-}++module Spark.Core.TypesSpec where++import GHC.Generics (Generic)+import Test.Hspec+import Test.Hspec.QuickCheck++import Spark.Core.Types+import Spark.Core.Internal.TypesFunctions+import Spark.Core.Internal.TypesGenerics()++data TestStruct1 = TestStruct1 {+ ts1f1 :: Int,+ ts1f2 :: Maybe Int } deriving (Show, Generic)++instance SQLTypeable TestStruct1++data TestStruct2 = TestStruct2 { ts2f1 :: [Int] } deriving (Show, Generic, SQLTypeable)++data TestStruct3 = TestStruct3 { ts3f1 :: Int } deriving (Show, Generic, SQLTypeable)+data TestStruct4 = TestStruct4 { ts4f1 :: TestStruct3 } deriving (Show, Generic, SQLTypeable)++-- instance SQLTypeable TestStruct1+-- instance Menu TestStruct1+++-- main :: IO ()+-- main = hspec spec++spec :: Spec+spec = do+ describe "Simple type tests" $ do+ it "show ints" $+ show intType `shouldBe` "int"++ it "show arrays" $+ show (arrayType' intType) `shouldBe` "[int]"++ it "show structures" $+ show (arrayType' (canNull intType)) `shouldBe` "[int?]"++ describe "The basic tests for int types" $ do+ it "ints" $+ let t = buildType :: (SQLType Int)+ dt = columnType t in+ dt `shouldBe` intType++ it "opt ints" $+ let t = buildType :: (SQLType (Maybe Int))+ dt = columnType t in+ dt `shouldBe` canNull intType++ -- The projection of all the product types+ it "opt opt ints" $+ let t = buildType :: (SQLType (Maybe (Maybe Int))) in+ columnType t `shouldBe` canNull intType++ it "array ints" $+ let t = buildType :: (SQLType [Int]) in+ columnType t `shouldBe` arrayType' intType++ it "array opt ints" $+ let t = buildType :: (SQLType [Maybe Int]) in+ columnType t `shouldBe` arrayType' (canNull intType)++ it "opt array ints" $+ let t = buildType :: (SQLType (Maybe [Int])) in+ columnType t `shouldBe` canNull (arrayType' intType)++ describe "The basic tests for records" $ do+ it "records with maybe" $+ let t = buildType :: (SQLType TestStruct1)+ out = structType [structField "ts1f1" intType, structField "ts1f2" (canNull intType)] in+ columnType t `shouldBe` out++ it "records with arrays" $+ let t = buildType :: (SQLType TestStruct2)+ out = structType [structField "ts2f1" (arrayType' intType)] in+ columnType t `shouldBe` out++ it "records within records" $+ let t = buildType :: (SQLType TestStruct4)+ out0 = structType [structField "ts3f1" intType]+ out = structType [structField "ts4f1" out0] in+ columnType t `shouldBe` out++ describe "Construction of frame types" $ do+ prop "frameTypeFromCol should be invertible" $+ \x ->+ let dt = colTypeFromFrame x+ y = frameTypeFromCol dt+ in x == y+ -- TODO this is not always working. Figure out the rules here.+ -- prop "colTypeFromFrame should be invertible" $+ -- \x -> (colTypeFromFrame . frameTypeFromCol) x == x
+ test/Spec.hs view
@@ -0,0 +1,2 @@+-- Not working???+{-# OPTIONS_GHC -F -pgmF hspec-discover #-}