diff --git a/ChangeLog.md b/ChangeLog.md
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--- /dev/null
+++ b/ChangeLog.md
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+# Revision history for hbf
+
+## 0.1.0.0 -- 2018-06-23
+
+* First version.
+** Compiler working.
+** VM working.
diff --git a/LICENSE b/LICENSE
new file mode 100644
--- /dev/null
+++ b/LICENSE
@@ -0,0 +1,674 @@
+              GNU GENERAL PUBLIC LICENSE
+                Version 3, 29 June 2007
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+PURPOSE.  THE ENTIRE RISK AS TO THE QUALITY AND PERFORMANCE OF THE PROGRAM
+IS WITH YOU.  SHOULD THE PROGRAM PROVE DEFECTIVE, YOU ASSUME THE COST OF
+ALL NECESSARY SERVICING, REPAIR OR CORRECTION.
+
+  16. Limitation of Liability.
+
+  IN NO EVENT UNLESS REQUIRED BY APPLICABLE LAW OR AGREED TO IN WRITING
+WILL ANY COPYRIGHT HOLDER, OR ANY OTHER PARTY WHO MODIFIES AND/OR CONVEYS
+THE PROGRAM AS PERMITTED ABOVE, BE LIABLE TO YOU FOR DAMAGES, INCLUDING ANY
+GENERAL, SPECIAL, INCIDENTAL OR CONSEQUENTIAL DAMAGES ARISING OUT OF THE
+USE OR INABILITY TO USE THE PROGRAM (INCLUDING BUT NOT LIMITED TO LOSS OF
+DATA OR DATA BEING RENDERED INACCURATE OR LOSSES SUSTAINED BY YOU OR THIRD
+PARTIES OR A FAILURE OF THE PROGRAM TO OPERATE WITH ANY OTHER PROGRAMS),
+EVEN IF SUCH HOLDER OR OTHER PARTY HAS BEEN ADVISED OF THE POSSIBILITY OF
+SUCH DAMAGES.
+
+  17. Interpretation of Sections 15 and 16.
+
+  If the disclaimer of warranty and limitation of liability provided
+above cannot be given local legal effect according to their terms,
+reviewing courts shall apply local law that most closely approximates
+an absolute waiver of all civil liability in connection with the
+Program, unless a warranty or assumption of liability accompanies a
+copy of the Program in return for a fee.
+
+              END OF TERMS AND CONDITIONS
+
+     How to Apply These Terms to Your New Programs
+
+  If you develop a new program, and you want it to be of the greatest
+possible use to the public, the best way to achieve this is to make it
+free software which everyone can redistribute and change under these terms.
+
+  To do so, attach the following notices to the program.  It is safest
+to attach them to the start of each source file to most effectively
+state the exclusion of warranty; and each file should have at least
+the "copyright" line and a pointer to where the full notice is found.
+
+    <one line to give the program's name and a brief idea of what it does.>
+    Copyright (C) <year>  <name of author>
+
+    This program is free software: you can redistribute it and/or modify
+    it under the terms of the GNU General Public License as published by
+    the Free Software Foundation, either version 3 of the License, or
+    (at your option) any later version.
+
+    This program is distributed in the hope that it will be useful,
+    but WITHOUT ANY WARRANTY; without even the implied warranty of
+    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+    GNU General Public License for more details.
+
+    You should have received a copy of the GNU General Public License
+    along with this program.  If not, see <http://www.gnu.org/licenses/>.
+
+Also add information on how to contact you by electronic and paper mail.
+
+  If the program does terminal interaction, make it output a short
+notice like this when it starts in an interactive mode:
+
+    <program>  Copyright (C) <year>  <name of author>
+    This program comes with ABSOLUTELY NO WARRANTY; for details type `show w'.
+    This is free software, and you are welcome to redistribute it
+    under certain conditions; type `show c' for details.
+
+The hypothetical commands `show w' and `show c' should show the appropriate
+parts of the General Public License.  Of course, your program's commands
+might be different; for a GUI interface, you would use an "about box".
+
+  You should also get your employer (if you work as a programmer) or school,
+if any, to sign a "copyright disclaimer" for the program, if necessary.
+For more information on this, and how to apply and follow the GNU GPL, see
+<http://www.gnu.org/licenses/>.
+
+  The GNU General Public License does not permit incorporating your program
+into proprietary programs.  If your program is a subroutine library, you
+may consider it more useful to permit linking proprietary applications with
+the library.  If this is what you want to do, use the GNU Lesser General
+Public License instead of this License.  But first, please read
+<http://www.gnu.org/philosophy/why-not-lgpl.html>.
diff --git a/README.md b/README.md
new file mode 100644
--- /dev/null
+++ b/README.md
@@ -0,0 +1,74 @@
+# HBF [![Build Status](https://travis-ci.org/paraseba/hbf.svg?branch=master)](https://travis-ci.org/paraseba/hbf)
+
+An unoptimized Brainfuck optimizing compiler and evaluator.
+
+[HBF](https://github.com/paraseba/hbf) can compile standard Brainfuck code into an optimized
+Intermediate Representation (IR). This IR can later be executed for faster Brainfuck program
+evaluation.
+
+
+## Getting Started
+
+### Installing
+Use your preferred method for installing HBF from [Hackage](fixme-link). If you prefer to build from source
+you can use cabal.
+
+### Usage
+
+Let's say you have a Brainfuck program in the file `mandelbrot.bf`, for example,
+you can get one [here](https://github.com/pablojorge/brainfuck/blob/master/programs/mandelbrot.bf)
+
+You can compile the program to the Intermediate Representation using the `hbfc` executable provided by this project:
+
+```
+hbfc mandelbrot.bf
+```
+
+That will create a file `mandelbrot.bfc` in the same directory. If you want the output in a different
+path you cane use `--output` option to `hbfc`
+
+Now, you can run the compiled program:
+
+```
+hbf mandelbrot.bfc
+```
+
+and get something like:
+
+![Mandelbrot](https://raw.githubusercontent.com/paraseba/hbf/e86d1ffebcb0795a7c2c6081e2dd27c4154db066/mandelbrot.png)
+
+
+There are several options  to both the compiler and the evaluator, to modify levels of optimization, output and others. Try
+`--help` to learn more.
+
+
+## Hacking
+HBF has heavily documented code. Take a look at the documentation on [Hackage](fixme-link).
+
+
+### Running the tests
+
+```
+cabal test
+```
+
+Test coverage report for the last build can be found [here](https://paraseba.gitlab.io/hbf/coverage/hpc_index.html).
+
+### Running the benchmarks
+
+```
+cabal bench
+```
+
+Benchmark report for the last build can be found [here](https://paraseba.gitlab.io/hbf/bench.html).
+
+## License
+
+This project is licensed under the GPL-3 License - see the [LICENSE](LICENSE) file for details
+
+Copyright 2018 Sebastian Galkin.
+
+## Acknowledgments
+
+This work is based on the excellent project [bfoptimization](https://github.com/matslina/bfoptimization) by matslina: 
+
diff --git a/Setup.hs b/Setup.hs
new file mode 100644
--- /dev/null
+++ b/Setup.hs
@@ -0,0 +1,3 @@
+import           Distribution.Simple
+
+main = defaultMain
diff --git a/bench/Main.hs b/bench/Main.hs
new file mode 100644
--- /dev/null
+++ b/bench/Main.hs
@@ -0,0 +1,48 @@
+module Main where
+
+import           Control.Monad.Trans.State (execStateT)
+import           Criterion.Main
+import qualified Data.Text.Lazy.IO         as TIO
+import           System.FilePath           (takeBaseName)
+
+import           HBF.Compiler              as C
+import qualified HBF.Eval                  as E
+import           HBF.Types
+
+type BenchmarkName = String
+
+type ProgramInput = MockIO
+
+type UnoptimizedP = Program Optimized
+
+type OptimizedP = Program Optimized
+
+programEnv ::
+     FilePath
+  -> String
+  -> IO (BenchmarkName, ProgramInput, OptimizedP, UnoptimizedP)
+programEnv file input = do
+  code <- TIO.readFile file
+  let (Right (optimized, _)) = C.inMemoryCompile C.defaultCompilerOptions code
+  let (Right (unoptimized, _)) =
+        inMemoryCompile noOptimizationCompilerOptions code
+  return (takeBaseName file, mkMockIOS input, optimized, unoptimized)
+
+mkProgramGroup ::
+     (BenchmarkName, ProgramInput, OptimizedP, UnoptimizedP) -> Benchmark
+mkProgramGroup ~(name, input, optimized, unoptimized) =
+  bgroup
+    name
+    [ bench "fully optimized" $ whnfIO $ execStateT (E.eval optimized) input
+    , bench "not optimized" $ whnfIO $ execStateT (E.eval unoptimized) input
+    ]
+
+main :: IO ()
+main =
+  defaultMain
+    [ bgroup
+        "programs"
+        [ env (programEnv "tests/factor.bf" "254504\n") mkProgramGroup
+        , env (programEnv "tests/allfeatures.bf" "0") mkProgramGroup
+        ]
+    ]
diff --git a/hbf.cabal b/hbf.cabal
new file mode 100644
--- /dev/null
+++ b/hbf.cabal
@@ -0,0 +1,200 @@
+-- This file has been generated from package.yml by hpack version 0.27.0.
+--
+-- see: https://github.com/sol/hpack
+--
+-- hash: 52d387cac5e4409ba9bbc2b21b18ab93084d896c2ca023d84c601d76dc628a8f
+
+name:                hbf
+version:             0.1.0.0
+cabal-version:       >= 1.10
+build-type:          Simple
+license:             GPL-3
+license-file:        LICENSE
+tested-with:         GHC == 8.2.1, GHC == 8.2.2, GHC == 8.4.1, GHC == 8.4.2, GHC == 8.4.3
+author:              Sebastian Galkin
+maintainer:          paraseba@gmail.com
+copyright:           Sebastian Galkin, 2018
+synopsis:            An optimizing Brainfuck compiler and evaluator
+description:         hbf is a compiler and executor of Brainfuck programs. It provides two executables: @hbfc@ the Brainfuck compiler, and @hbf@ the virtual machine that executes compiled Brainfuck programs.
+homepage:            https://gitlab.com/paraseba/hbf
+bug-reports:         https://gitlab.com/paraseba/hbf/issues
+category:            Language
+
+extra-source-files:
+    ChangeLog.md
+    README.md
+    tests/allfeatures.bf
+    tests/factor.bf
+    tests/squares.bf
+
+source-repository head
+  type: git
+  location: git@gitlab.com:paraseba/hbf.git
+
+flag dump
+  description: Dump stg and core files
+  manual: True
+  default: False
+
+flag profile
+  description: Enable profiling in benchmarks
+  manual: True
+  default: False
+
+library
+  exposed-modules:
+      HBF.Types
+      HBF.Parser
+      HBF.Eval
+      HBF.Compiler
+  other-modules:
+      Paths_hbf
+  build-depends:
+      base >=4.10.0.0 && <4.13
+    , binary >=0.8.5.1
+    , bytestring >=0.10.8.0
+    , deepseq >=1.4.3.0
+    , filepath >=1.4.1.2
+    , optparse-applicative >=0.14.0.0
+    , parsec >=3.1.13.0
+    , primitive >=0.6.2.0
+    , text >=1.2.2.0
+    , transformers >=0.5.2.0
+    , vector >=0.12.0.1
+  if flag(dump)
+    ghc-options: -ddump-simpl -ddump-stg -ddump-to-file -dsuppress-idinfo -dsuppress-coercions -dsuppress-type-applications -dsuppress-uniques
+  if flag(profile)
+    ghc-options: -fprof-auto
+  hs-source-dirs:
+      src
+  default-language: Haskell2010
+  ghc-options: -Wall -fwarn-incomplete-record-updates -fwarn-monomorphism-restriction
+
+executable hbf
+  main-is: Main.hs
+  other-modules:
+      Paths_hbf
+  hs-source-dirs:
+      src/exe/hbf
+  ghc-options: -Wall -fwarn-incomplete-record-updates -fwarn-monomorphism-restriction
+  build-depends:
+      base >=4.10.0.0 && <4.13
+    , binary >=0.8.5.1
+    , bytestring >=0.10.8.0
+    , deepseq >=1.4.3.0
+    , filepath >=1.4.1.2
+    , hbf
+    , optparse-applicative >=0.14.0.0
+    , parsec >=3.1.13.0
+    , primitive >=0.6.2.0
+    , text >=1.2.2.0
+    , transformers >=0.5.2.0
+    , vector >=0.12.0.1
+  if flag(profile)
+    ghc-options: -fprof-auto -with-rtsopts='-p -s -h -i0.05'
+  default-language: Haskell2010
+
+executable hbfc
+  main-is: Main.hs
+  other-modules:
+      Paths_hbf
+  hs-source-dirs:
+      src/exe/hbfc
+  ghc-options: -Wall -fwarn-incomplete-record-updates -fwarn-monomorphism-restriction
+  build-depends:
+      base >=4.10.0.0 && <4.13
+    , binary >=0.8.5.1
+    , bytestring >=0.10.8.0
+    , deepseq >=1.4.3.0
+    , filepath >=1.4.1.2
+    , hbf
+    , optparse-applicative >=0.14.0.0
+    , parsec >=3.1.13.0
+    , primitive >=0.6.2.0
+    , text >=1.2.2.0
+    , transformers >=0.5.2.0
+    , vector >=0.12.0.1
+  default-language: Haskell2010
+
+test-suite doctest
+  type: exitcode-stdio-1.0
+  main-is: doctest.hs
+  hs-source-dirs:
+      tests
+  ghc-options: -Wall -fwarn-incomplete-record-updates -fwarn-monomorphism-restriction -threaded -with-rtsopts=-N
+  build-depends:
+      base >=4.10.0.0 && <4.13
+    , binary >=0.8.5.1
+    , bytestring >=0.10.8.0
+    , deepseq >=1.4.3.0
+    , doctest
+    , filepath >=1.4.1.2
+    , hbf
+    , optparse-applicative >=0.14.0.0
+    , parsec >=3.1.13.0
+    , primitive >=0.6.2.0
+    , text >=1.2.2.0
+    , transformers >=0.5.2.0
+    , vector >=0.12.0.1
+  default-language: Haskell2010
+
+test-suite test
+  default-language: Haskell2010
+  type: exitcode-stdio-1.0
+  hs-source-dirs:
+      tests
+  main-is: test.hs
+  build-depends:
+      HUnit >=1.3.1.0
+    , base >=4.10.0.0 && <4.13
+    , binary >=0.8.5.1
+    , bytestring >=0.10.8.0
+    , deepseq >=1.4.3.0
+    , filepath >=1.4.1.2
+    , hbf
+    , hedgehog >=0.5
+    , hedgehog-checkers >=0.1.0.0
+    , optparse-applicative >=0.14.0.0
+    , parsec >=3.1.13.0
+    , primitive >=0.6.2.0
+    , smallcheck >=1.1
+    , tasty >=0.11.2.1
+    , tasty-discover >=2.0.0
+    , tasty-hedgehog >=0.1.0.0
+    , tasty-hunit >=0.9.2
+    , tasty-smallcheck >=0.8
+    , temporary >=1.2.0.3
+    , text >=1.2.2.0
+    , transformers >=0.5.2.0
+    , vector >=0.12.0.1
+  ghc-options: -Wall -fwarn-incomplete-record-updates -fwarn-monomorphism-restriction -threaded -with-rtsopts=-N
+  other-modules:
+      ParserTest
+      CompilerTest
+      EvalTest
+      IntegrationTests
+      Helper
+
+benchmark evalbench
+  other-modules:
+      Paths_hbf
+  hs-source-dirs:
+      bench
+  ghc-options: -Wall -fwarn-incomplete-record-updates -fwarn-monomorphism-restriction -threaded -with-rtsopts=-N
+  type: exitcode-stdio-1.0
+  main-is: Main.hs
+  default-language: Haskell2010
+  build-depends:
+      base >=4.10.0.0 && <4.13
+    , binary >=0.8.5.1
+    , bytestring >=0.10.8.0
+    , criterion >=1.1.4.0
+    , deepseq >=1.4.3.0
+    , filepath >=1.4.1.2
+    , hbf
+    , optparse-applicative >=0.14.0.0
+    , parsec >=3.1.13.0
+    , primitive >=0.6.2.0
+    , text >=1.2.2.0
+    , transformers >=0.5.2.0
+    , vector >=0.12.0.1
diff --git a/src/HBF/Compiler.hs b/src/HBF/Compiler.hs
new file mode 100644
--- /dev/null
+++ b/src/HBF/Compiler.hs
@@ -0,0 +1,557 @@
+{-# LANGUAGE LambdaCase      #-}
+{-# LANGUAGE RecordWildCards #-}
+
+{-|
+Description : Brainfuck compilation to IR
+Copyright   : (c) Sebastian Galkin, 2018
+License     : GPL-3
+
+In this module we:
+
+    - Convert 'Text' into a Brainfuck intermediate representation (IR) consisting of lists of 'Op's.
+    - Provide optimization rules to speed up IR execution.
+    - Parse compiler command line options
+-}
+module HBF.Compiler
+  ( module HBF.Compiler
+  -- * Reexport from "BFP.Parser"
+  , BFP.ParseError
+  ) where
+
+import           Control.Monad             (when)
+import           Control.Monad.Trans.State (State, execState, get, modify, put)
+import qualified Data.Binary               as B
+import           Data.ByteString.Lazy      (ByteString)
+import           Data.Coerce               (coerce)
+import           Data.Foldable             (traverse_)
+import           Data.Functor.Identity     (Identity)
+import           Data.Maybe                (fromMaybe)
+import           Data.Semigroup            (Semigroup (..), (<>))
+import           Data.Text.Lazy            (Text)
+import qualified Data.Text.Lazy.IO         as TIO
+import           Data.Tuple                (swap)
+import           Options.Applicative       (Parser, ParserInfo, ParserResult,
+                                            argument, defaultPrefs,
+                                            execParserPure, fullDesc,
+                                            handleParseResult, header, help,
+                                            helper, info, long, metavar, option,
+                                            optional, progDesc, short, str,
+                                            switch, (<**>))
+import           System.Environment        (getArgs)
+import           System.FilePath           ((-<.>))
+import qualified Text.Parsec               as Parsec
+import           Text.Parsec.Pos           (initialPos)
+
+import qualified HBF.Parser                as BFP
+import           HBF.Types
+
+-- * Compilation
+-- | Encode the compiled file into the given path.
+saveCompilerOutput :: Program Optimized -> FilePath -> IO ()
+saveCompilerOutput = flip B.encodeFile . instructions
+
+-- | Use the given 'CompilerOptions' to parse, compile and optimize the text representation of a
+-- Brainfuck program into the IR. 'cOptsSource' and 'cOptsOut' in the compiler options are ignored.
+inMemoryCompile ::
+     CompilerOptions
+  -> Text
+  -> Either BFP.ParseError (Program Optimized, CompilationSummary)
+inMemoryCompile opts code =
+  (\p -> (p, summarizeCompilation p)) . optimize opts <$> BFP.parseProgram code
+
+-- | Compilation summary for the user. It contains overview information and
+-- statistics about the compilation result.
+newtype CompilationSummary = CompilationSummary
+  { compNumInstructions :: Int
+  } deriving (Show)
+
+-- | Summarize a compiled program creating the 'CompilationSummary'
+summarizeCompilation :: Program Optimized -> CompilationSummary
+summarizeCompilation = CompilationSummary . length . instructions
+
+-- | Use 'CompilerOptions' to read, compile, optimize, and save a program from/to the filesystem.
+-- Input and output files are provided by 'cOptsSource' and 'cOptsOut'.
+compile :: CompilerOptions -> IO (Either BFP.ParseError CompilationSummary)
+compile opts@CompilerOptions {..} = do
+  when cOptsVerbose $ do
+    putStrLn "Compiler options:"
+    print opts
+  compileResult <- inMemoryCompile opts <$> TIO.readFile cOptsSource
+  either
+    (return . Left)
+    (\p -> save p >> (return . Right . snd) p)
+    compileResult
+  where
+    outPath = fromMaybe (cOptsSource -<.> "bfc") cOptsOut
+    save (program, _) = saveCompilerOutput program outPath
+
+-- | Apply optimizations to the 'Unoptimized' program turning. The optimizations that
+-- will be available are the ones specified by the 'CompilerOptions' given.
+optimize :: CompilerOptions -> Program Unoptimized -> Program Optimized
+optimize CompilerOptions {..} p = foldl (flip ($)) base optimizations
+  where
+    base = toIR p
+    opt condition f =
+      if condition
+        then f
+        else id
+    optimizations =
+      [ opt cOptsClearLoopOptimization clearOpt
+      , opt cOptsMulOptimization mulOpt
+      , opt cOptsScanOptimization scanOpt
+      , opt cOptsOffsetInstructionsOptimization offsetInstructionOpt
+      , opt cOptsFusionOptimization fusionOpt
+      ]
+
+-- | Given a parsed program, turn it into an optimized one, but with the null optimization.
+-- Effectively this is only a type change.
+toIR :: Program Unoptimized -> Program Optimized
+toIR = coerce
+
+-- * Optimization
+-- | Helper type to apply the Fuse optimization using a 'Monoid'.
+newtype FusedProgram = Fused
+  { unfused :: Program Optimized
+  } deriving (Show)
+
+-- | This 'Semigroup' for 'FusedProgram' does all the fusion optimization work.
+-- When two contiguous optimizations can be fused into one, '<>' will reduce the
+-- size of the list in the 'FusedProgram'.
+--
+-- Examples of fusable operations:
+--
+--    - (Inc a offset) (Inc b offset) -> (Inc (a+b) offset)
+--    - (Move 3 offset) (Move (-3) offset) -> NoOp
+--    - (Clear offset) (Clear offset) -> Clear offset
+--    - (Scan Up offset) (Scan _ offset') -> Scan Up offset
+instance Semigroup FusedProgram where
+  Fused (Program p1) <> Fused (Program p2) = Fused $ Program $ fuse p1 p2
+    where
+      fuse :: [Op] -> [Op] -> [Op]
+      fuse [] ops           = ops
+      fuse ops []           = ops
+      fuse [op1] (op2:more) = join op1 op2 ++ more
+      fuse (op1:more) ops2  = op1 : fuse more ops2
+      join :: Op -> Op -> [Op]
+      join (Inc a n) (Inc b m)
+        | n == m = ifNotZero (flip Inc n) $ a + b
+      join (Move a) (Move b) = ifNotZero Move $ a + b
+      join (In a n) (In b m)
+        | n == m = ifNotZero (flip In n) $ a + b
+      join (Out a n) (Out b m)
+        | n == m = ifNotZero (flip Out n) $ a + b
+      join (Clear n) (Clear m)
+        | n == m = [Clear n]
+      -- once a scan is found, another one won't move the pointer
+      join (Scan Up o1) (Scan _ o2)
+        | o1 == o2 = [Scan Up o1]
+      join (Scan Down o1) (Scan _ o2)
+        | o1 == o2 = [Scan Down o1]
+      join a b = [a, b]
+      ifNotZero f n = [f n | n /= 0]
+
+-- | Use the 'Semigroup' instance and an empty program as 'mempty'.
+instance Monoid FusedProgram where
+  mempty = Fused mempty
+  mappend = (<>)
+
+-- | Apply the fusion optimization using the 'FusedProgram' 'Monoid' instance.
+--
+-- The fusion optimization consist of turning multiple instructions into one. For example
+-- if the original Brainfuck code contains '++++', this would be parsed as
+--
+-- @
+--'Program' ['Inc' 1 0, 'Inc' 1 0, 'Inc' 1 0, 'Inc' 1 0]
+-- @
+--
+-- but it would be fused to a single IR instruction: @Inc 4 0@.
+--
+-- >>> fusionOpt $ Program [Inc 1 0, Inc 1 0, Inc 1 0, Inc 1 0]
+-- [Inc 4 0]
+--
+-- Similarly, other instructions,
+-- like 'Move', 'In', 'Out', 'Clear' and 'Scan' can be fused as long as the offset at which they
+-- must be applied is the same.
+--
+-- Non fusable operation remain unchanged:
+--
+-- >>> fusionOpt $ Program [Inc 1 0, Inc 1 1]
+-- [Inc 1 0,Inc 1 1]
+fusionOpt :: Program Optimized -> Program Optimized
+fusionOpt = unfused . foldMap (Fused . Program . optimizeIn) . instructions
+  where
+    optimizeIn (Loop as) = [Loop inner | not (null inner)]
+      where
+        inner = instructions $ fusionOpt $ Program as
+    optimizeIn other = [other]
+
+-- | Helper function used to implement optimizations
+-- Iterate over all 'Program' instructions searching for 'Loop's. For each 'Loop'
+-- apply 'f'. If 'f' returns a list of new operations, replace the original loop with
+-- the new instructions. If 'f' returns 'Nothing', process recursively the loop instructions.
+liftLoop :: ([Op] -> Maybe [Op]) -> Program o -> Program o
+liftLoop f = Program . (>>= g) . instructions
+  where
+    g :: Op -> [Op]
+    g (Loop ops) =
+      fromMaybe ((: []) . Loop . instructions . liftLoop f $ Program ops) $
+      f ops
+    g other = [other]
+
+-- | Basic optimization that turns the loop @[-]@ into a single instruction 'Clear'.
+-- Useful because clearing a memory position is a pretty common operation in Brainfuck and
+-- very expensive if treated as a loop.
+--
+-- >>> :set -XOverloadedStrings
+-- >>> Right (res, _) = inMemoryCompile defaultCompilerOptions "[-]"
+-- >>> res
+-- [Clear 0]
+clearOpt :: Program Optimized -> Program Optimized
+clearOpt = liftLoop onLoops
+  where
+    onLoops :: [Op] -> Maybe [Op]
+    onLoops [Inc (-1) 0] = Just [Clear 0]
+    onLoops _            = Nothing
+
+-- | Copy and multiply optimization. A very common usage of loops is to copy the value of a memory
+-- position to a different: @[->>+<<]@ this will move the contents of the current memory position
+-- to places to the right, also clearing the original position to zero. If we change the number of @+@
+-- operations we get multiplication, if we have several groups of @++..@ operations we get multiple copies.
+-- In the general case, for example:
+--
+-- >>> :set -XOverloadedStrings
+-- >>> Right (res, _) = inMemoryCompile defaultCompilerOptions "[->+>++>++++<<<]"
+-- >>> res
+-- [Mul 1 0 1,Mul 2 0 2,Mul 4 0 3,Clear 0]
+--
+-- The original Brainfuck copies the current position one place to the right, doubles
+-- the current position two places to the right, and quadruples the current position three places to the right;
+-- finally zeroing the current position. With the mul optimization in this function, all that loop would be
+-- replaced by 4 instructions.
+mulOpt :: Program Optimized -> Program Optimized
+mulOpt = liftLoop onLoops
+  where
+    onLoops :: [Op] -> Maybe [Op]
+    onLoops ops = makeOp <$> eitherToMaybe (Parsec.parse mulP "" ops)
+      where
+        makeOp :: [(MulFactor, MemOffset)] -> [Op]
+        makeOp = (++ [Clear 0]) . snd . foldl it (0, [])
+          where
+            it (totalOff, res) (fact, off) =
+              (totalOff + off, res ++ [Mul fact 0 (off + totalOff)]) -- todo very inefficient  foldr
+
+-- | Implement the scan optimization. Another common operation in Brainfuck is to search for the first zero
+-- in the neighboring memory, either to the right or to the left @[>]@ or @[<]@. These loops can be replaced
+-- for a more optimal search, represented as a single @'Scan' 'Up'@ or @'Scan' 'Down'@ instruction.
+--
+-- >>> scanOpt $ Program [Loop [Move 1]]
+-- [Scan Up 0]
+scanOpt :: Program Optimized -> Program Optimized
+scanOpt = liftLoop onLoops
+  where
+    onLoops :: [Op] -> Maybe [Op]
+    onLoops [Move 1]    = Just [Scan Up 0]
+    onLoops [Move (-1)] = Just [Scan Down 0]
+    onLoops _           = Nothing
+
+-- | Helper datastructure to implement a stateful transformation in 'offsetInstructionOpt'.
+data OffsetState = OffSt
+  { stOptimized :: [Op] -- ^ The optimized program so far
+  , stBatch     :: [Op] -- ^ The current batch of instructions being optimized (between loops)
+  , stOffset    :: MemOffset -- ^ The current offset since the last loop
+  } deriving (Show)
+
+-- | Start state for 'offsetInstructionOpt'.
+emptyState :: OffsetState
+emptyState = OffSt [] [] 0
+
+-- | Implement the offset instruction optimization. This is probably the most complex
+-- optimization implemented in the library.
+--
+-- In streams of instructions between loops, there is no need to keep updating the current position
+-- if we can keep track of where the different operations should be applied. This is a trade-off
+-- of time (not updating the pointer) by space (keeping track of the offset in every operation).
+-- For example the following unoptimized code
+--
+--
+-- >>> offsetInstructionOpt  $ Program [Loop [], Move 1, Inc 1 0, Move 2, Clear 0, Mul 2 0 1, Loop []]
+-- [Loop [],Inc 1 1,Clear 3,Mul 2 3 1,Move 3,Loop []]
+--
+-- And the optimization eliminated one 'Move' instruction. In general, for larger programs the gain
+-- will be more noticeable.
+--
+-- An important detail to take into account is that 'Scan' operations break the stream of operations
+-- that can be optimized together, and turn the accumulated offset back to zero:
+--
+-- >>> offsetInstructionOpt  $ Program [Loop [], Move 1, Inc 1 0, Scan Up 0, Inc 0 2, Loop []]
+-- [Loop [],Inc 1 1,Scan Up 1,Inc 0 2,Loop []]
+offsetInstructionOpt :: Program Optimized -> Program Optimized
+offsetInstructionOpt -- We implement this as a stateful computation for code clarity
+ =
+  Program .
+  stOptimized .
+  (`execState` emptyState) .
+  (*> finishLastBatch) . traverse_ processOp . instructions
+  where
+    processOp :: Op -> State OffsetState ()
+    processOp (Loop l) = do
+      let newLoop = Loop (instructions $ offsetInstructionOpt (Program l))
+      finishBatch
+      modify $ \s@OffSt {..} -> s {stOptimized = newLoop : stOptimized}
+    processOp (Move n) = get >>= \s -> put s {stOffset = stOffset s + n}
+    processOp (Inc n off) = add off (Inc n)
+    processOp (In n off) = add off (In n)
+    processOp (Out n off) = add off (Out n)
+    processOp (Clear off) = add off Clear
+    processOp (Mul factor from to) = add from (\o -> Mul factor o to)
+    processOp (Scan d off) = do
+      OffSt {..} <- get
+      put
+        OffSt
+          { stOffset = 0
+          , stOptimized = stOptimized
+          , stBatch = Scan d (off + stOffset) : stBatch
+          }
+    add :: MemOffset -> (MemOffset -> Op) -> State OffsetState ()
+    add off op =
+      get >>= \s@OffSt {..} -> put s {stBatch = op (off + stOffset) : stBatch}
+    finishBatch :: State OffsetState ()
+    finishBatch = do
+      s@OffSt {..} <- get
+      let batch =
+            if stOffset /= 0
+              then Move stOffset : stBatch
+              else stBatch
+      put s {stBatch = [], stOffset = 0, stOptimized = batch ++ stOptimized}
+    finishLastBatch :: State OffsetState ()
+    finishLastBatch = do
+      finishBatch
+      modify $ \s@OffSt {..} -> s {stOptimized = reverse stOptimized}
+
+-- * Loading Compiled Code
+-- | Load a compiled program from 'saveCompilerOutput' output.
+load :: ByteString -> Program Optimized
+load = B.decode
+
+-- | Load a compiled program saved with 'saveCompilerOutput'.
+loadFile :: FilePath -> IO (Program Optimized)
+loadFile = B.decodeFile
+
+-- * Compiler Flags
+-- | Command line flags to the Brainfuck compiler
+data CompilerOptions = CompilerOptions
+  { cOptsOut                            :: Maybe FilePath -- ^ Where to put the compiled output, if 'Nothing' use the input basename with bfc extension
+  , cOptsFusionOptimization             :: Bool -- ^ Enable fusion optimization
+  , cOptsClearLoopOptimization          :: Bool -- ^ Enable clear loop optimization
+  , cOptsMulOptimization                :: Bool -- ^ Enable mul loop optimization
+  , cOptsScanOptimization               :: Bool -- ^ Enable scan loop optimization
+  , cOptsOffsetInstructionsOptimization :: Bool -- ^ Enable offset instructions optimization
+  , cOptsVerbose                        :: Bool -- ^ Output more debugging information
+  , cOptsSource                         :: FilePath -- ^ Input source to the compiler, this should be Brainfuck code
+  } deriving (Show)
+
+optionsP :: Parser CompilerOptions
+optionsP =
+  (\output disableAll fusion clear mul scan offset verbose source ->
+     CompilerOptions
+       { cOptsOut = output
+       , cOptsFusionOptimization = not disableAll || fusion
+       , cOptsClearLoopOptimization = not disableAll || clear
+       , cOptsMulOptimization = not disableAll || mul
+       , cOptsScanOptimization = not disableAll || scan
+       , cOptsOffsetInstructionsOptimization = not disableAll || offset
+       , cOptsVerbose = verbose
+       , cOptsSource = source
+       }) <$>
+  optional
+    (option
+       str
+       (long "output" <> short 'o' <> metavar "OUT" <>
+        help "Compiled output path")) <*>
+  switch
+    (long "disable-all-optimizations" <> short 'd' <>
+     help "Disable all optimizations") <*>
+  switch
+    (long "fusion" <>
+     help
+       "Reenable fusion optimization (turn multiple + or > into a single operation)") <*>
+  switch
+    (long "clear" <>
+     help "Reenable clear loop optimization (turn [-] into a single operation)") <*>
+  switch
+    (long "mul" <>
+     help
+       "Reenable mul loop optimization (turn [->++>+++<<] into [Mul(1, 2) Mul(2,3)] Clear operations)") <*>
+  switch
+    (long "scan" <>
+     help "Reenable scan loop optimization (turn [>] into ScanR operation)") <*>
+  switch
+    (long "offset" <>
+     help
+       "Reenable offset instructions optimization (turn >>+>->> into Inc 1 2, Inc (-1) 1, Move 1, Move 1, Move 1, Move 1, Move 1, operation)") <*>
+  switch
+    (long "verbose" <> short 'v' <> help "Output more debugging information") <*>
+  argument str (metavar "SRC" <> help "Input source code file")
+
+options :: ParserInfo CompilerOptions
+options =
+  info
+    (optionsP <**> helper)
+    (fullDesc <> progDesc "Compile Brainfuck code in SRC file" <>
+     header "An optimizing Brainfuck compiler and evaluator")
+
+-- | Default compiler options: all optimizations, not verbose, no input or output files.
+defaultCompilerOptions :: CompilerOptions
+defaultCompilerOptions =
+  CompilerOptions
+    { cOptsOut = Nothing
+    , cOptsFusionOptimization = True
+    , cOptsClearLoopOptimization = True
+    , cOptsMulOptimization = True
+    , cOptsScanOptimization = True
+    , cOptsOffsetInstructionsOptimization = True
+    , cOptsVerbose = False
+    , cOptsSource = ""
+    }
+
+-- | Compiler options: all optimizations off.
+noOptimizationCompilerOptions :: CompilerOptions
+noOptimizationCompilerOptions =
+  CompilerOptions
+    { cOptsOut = Nothing
+    , cOptsFusionOptimization = False
+    , cOptsClearLoopOptimization = False
+    , cOptsMulOptimization = False
+    , cOptsScanOptimization = False
+    , cOptsOffsetInstructionsOptimization = False
+    , cOptsVerbose = False
+    , cOptsSource = ""
+    }
+
+-- | Parse a list of command line arguments
+parsePure :: [String] -> ParserResult CompilerOptions
+parsePure = execParserPure defaultPrefs options
+
+-- | Parse a list of command line arguments printing errors to the stderr
+unsafeParse :: [String] -> IO CompilerOptions
+unsafeParse = handleParseResult . parsePure
+
+-- | Parse command line arguments printing errors to the stderr
+parse :: IO CompilerOptions
+parse = getArgs >>= unsafeParse
+
+----------------------- implementation details ----------------------
+-- * Implementation Detail: Parsing Lists of Instructions
+-- | This parser is used to implement the mul optimization. See 'mulOpt'.
+type ProgramParser a = Parsec.ParsecT [Op] () Identity a
+
+-- | Parse successfully if the token satisfies the predicate.
+satisfy' :: Show t => (t -> Bool) -> Parsec.ParsecT [t] () Identity t
+satisfy' predicate = Parsec.token showTok posFromTok testTok
+  where
+    showTok t = show t
+    posFromTok _ = initialPos ""
+    testTok t =
+      if predicate t
+        then Just t
+        else Nothing
+
+-- | Parse movement to the right (\>), returning the offset value.
+--
+-- >>> Parsec.parse mrightP "" [Move 3]
+-- Right 3
+--
+-- >>> Data.Either.isLeft $ Parsec.parse mrightP "" [Move (-1)]
+-- True
+mrightP :: ProgramParser MemOffset
+mrightP =
+  satisfy' isRight <&> \case
+    Move n -> n
+    _ -> undefined
+
+-- | Parsemovement to the left (\<), returning the offset value.
+--
+-- >>> Parsec.parse mleftP "" [Move (-3)]
+-- Right 3
+--
+-- >>> Data.Either.isLeft $ Parsec.parse mleftP "" [Move 1]
+-- True
+mleftP :: ProgramParser MemOffset
+mleftP =
+  satisfy' isLeft <&> \case
+    Move n -> (negate n)
+    _ -> undefined
+
+-- | Parse increment, returning total increment.
+--
+-- >>> Parsec.parse plusP "" [Inc 3 0]
+-- Right 3
+--
+-- >>> Data.Either.isLeft $ Parsec.parse plusP "" [Inc (-2) 0]
+-- True
+plusP :: ProgramParser Int
+plusP =
+  satisfy' isPlus <&> \case
+    Inc n 0 -> n
+    _ -> undefined
+
+-- | Parse decrement, returning total decrement.
+--
+-- >>> Parsec.parse minusP "" [Inc (-3) 0]
+-- Right 3
+--
+-- >>> Data.Either.isLeft $ Parsec.parse minusP "" [Inc 2 0]
+-- True
+minusP :: ProgramParser Int
+minusP =
+  satisfy' isMinus <&> \case
+    Inc n 0 -> (negate n)
+    _ -> undefined
+
+-- | Sum the result of a parser applied repeatedly
+--
+-- >>> Parsec.parse (summedP plusP) "" [Inc 3 0, Inc 1 0, Inc (-4) 0]
+-- Right 4
+summedP :: Num n => ProgramParser n -> ProgramParser n
+summedP = fmap sum . Parsec.many1
+
+-- | Full multiple copy/multiply operation parser. Returns the set of factors and relative, incremental offsets.
+--
+-- >>> Parsec.parse mulP "" [Inc (-1) 0, Move 1, Inc 2 0, Move 3, Inc 1 0, Move (-4)]
+-- Right [(2,1),(1,3)]
+mulP :: ProgramParser [(MulFactor, MemOffset)]
+mulP = do
+  _ <- minusP
+  copies <- Parsec.many1 shiftFactorP
+  let totalShift = sum $ map fst copies
+  back <- summedP mleftP
+  Parsec.eof
+  if back == coerce totalShift
+    then return (fmap swap copies)
+    else Parsec.unexpected "number of left returns to close the loop"
+  where
+    shiftFactorP = (,) <$> summedP mrightP <*> fmap MulFactor (summedP plusP)
+
+-- | Is the instruction a right movement?
+isRight :: Op -> Bool
+isRight (Move n)
+  | n > 0 = True
+isRight _ = False
+
+-- | Is the instruction a left movement?
+isLeft :: Op -> Bool
+isLeft (Move n)
+  | n < 0 = True
+isLeft _ = False
+
+-- | Is the instruction an increment?
+isPlus :: Op -> Bool
+isPlus (Inc n 0)
+  | n > 0 = True
+isPlus _ = False
+
+-- | Is the instruction a decrement?
+isMinus :: Op -> Bool
+isMinus (Inc n 0)
+  | n < 0 = True
+isMinus _ = False
diff --git a/src/HBF/Eval.hs b/src/HBF/Eval.hs
new file mode 100644
--- /dev/null
+++ b/src/HBF/Eval.hs
@@ -0,0 +1,235 @@
+{-# LANGUAGE FlexibleContexts    #-}
+{-# LANGUAGE RecordWildCards     #-}
+{-# LANGUAGE ScopedTypeVariables #-}
+{-# OPTIONS_GHC -fno-full-laziness #-}
+
+{-|
+Description : Brainfuck Virtual Machine
+Copyright   : (c) Sebastian Galkin, 2018
+License     : GPL-3
+
+Functions to evaluate a compiled Brainfuck program.
+-}
+module HBF.Eval
+  ( MachineType
+  , eval
+  , evalWith
+  , evalWithIO
+  , evalWithMachine
+  , emptyMachine
+  , mkMachine
+  , VMOptions(..)
+  , defaultVMOptions
+  , unsafeParse
+  , parse
+  , parsePure
+  ) where
+
+import           Control.Monad                     (replicateM_, when)
+import           Control.Monad.Primitive           (PrimMonad, PrimState)
+import           Data.Coerce                       (coerce)
+import           Data.Int                          (Int8)
+import           Data.Maybe                        (fromMaybe)
+import           Data.Monoid                       ((<>))
+import qualified Data.Vector.Fusion.Stream.Monadic as VStream
+import qualified Data.Vector.Generic               as GV
+import qualified Data.Vector.Generic.Mutable       as MV
+import qualified Data.Vector.Unboxed
+import           Options.Applicative               (Parser, ParserInfo,
+                                                    ParserResult, argument,
+                                                    auto, defaultPrefs,
+                                                    execParserPure, fullDesc,
+                                                    handleParseResult, header,
+                                                    help, helper, info, long,
+                                                    metavar, option, progDesc,
+                                                    short, str, switch, value,
+                                                    (<**>))
+import           System.Environment                (getArgs)
+
+import           HBF.Types
+
+-- | An alias for a 'Machine' in which memory is an unboxed vector of bytes.
+type MachineType = Machine (Data.Vector.Unboxed.Vector Int8)
+
+{-# INLINABLE eval #-}
+-- | Evaluate the given program returning the end state of the 'Machine'. The evaluation can
+-- happen in any 'PrimMonad' for which we can do I/O. The reason to use 'PrimState' is that
+-- we will use mutable vectors for the evaluation.
+eval :: (PrimMonad m, MachineIO m) => Program Optimized -> m MachineType
+eval = evalWithMachine defaultVMOptions emptyMachine
+
+{-# INLINABLE evalWith #-}
+-- | Evaluate the given program returning the end state of the 'Machine'. The evaluation can
+-- happen in any 'PrimMonad' for which we can do I/O. The reason to use 'PrimState' is that
+-- we will use mutable vectors for the evaluation. 'VMOptions' are used to tune the details
+-- of the VM, like available memory, verbosity, etc.
+evalWith ::
+     (PrimMonad m, MachineIO m)
+  => VMOptions
+  -> Program Optimized
+  -> m MachineType
+evalWith opts program =
+  evalWithMachine opts (mkMachine (vmOptsMemoryBytes opts)) program
+
+{-# INLINABLE evalWithIO #-}
+-- | Evaluate the given program returning the end state of the 'Machine'. The evaluation
+-- happens in IO, so Input/Output is done to the console.
+evalWithIO :: VMOptions -> Program Optimized -> IO MachineType
+evalWithIO opts program = do
+  machine <- evalWith opts program
+  when (vmOptsDumpMemory opts) $ print machine
+  return machine
+
+{-# SPECIALISE evalWithMachine ::
+                 VMOptions -> MachineType -> Program Optimized -> IO MachineType #-}
+
+{-# INLINABLE evalWithMachine #-}
+-- | Evaluate the given program returning the end state of the 'Machine'. The evaluation can
+-- happen in any 'PrimMonad' for which we can do I/O. The reason to use 'PrimState' is that
+-- we will use mutable vectors for the evaluation. 'VMOptions' are used to tune the details
+-- of the VM, like memory available, verbosity, etc. The evaluation starts with the specified
+-- 'MachineType', so the memory and initial pointer can be configured before running.
+evalWithMachine ::
+     forall m. (PrimMonad m, MachineIO m)
+  => VMOptions
+  -> MachineType
+  -> Program Optimized
+  -> m MachineType
+evalWithMachine _ Machine {..} program = do
+  mem <- GV.thaw memory
+  finalPointer <- mutableEval (instructions program) mem 0
+  finalMemory <- GV.unsafeFreeze mem
+  return Machine {memory = finalMemory, pointer = finalPointer}
+  -- For some reason making this function a top level binding brings down performance by compiling
+  -- without native arithmetic. Even if we add SPECIALIZE pragma
+  -- Maybe this is the reason why we also need -fno-full-laziness
+  where
+    mutableEval ::
+         forall v. (MV.MVector v Int8)
+      => [Op]
+      -> v (PrimState m) Int8
+      -> MemOffset
+      -> m MemOffset
+    mutableEval [] _ pos = return pos
+    mutableEval (op:ops) mem pos =
+      case op of
+        Inc n memOffset ->
+          MV.unsafeModify mem (+ fromIntegral n) (o2i $ pos + memOffset) *>
+          mutableEval ops mem pos
+        Move n -> mutableEval ops mem (pos + coerce n)
+        Out times memOffset -> do
+          val <- MV.unsafeRead mem (o2i $ pos + memOffset)
+          replicateM_ times (putByte val)
+          mutableEval ops mem pos
+        In times memOffset ->
+          if times == 0
+            then mutableEval ops mem pos
+            else let input :: m (Maybe Int8)
+                     input =
+                       foldr (flip (*>)) (return Nothing) $
+                       replicate times getByte
+                  in do input >>=
+                          MV.write mem (o2i $ pos + memOffset) . fromMaybe 0
+                        mutableEval ops mem pos
+        Loop l -> do
+          let go pos' = do
+                condition <- MV.unsafeRead mem (o2i pos')
+                if condition == 0
+                  then mutableEval ops mem pos'
+                  else (do pos'' <- mutableEval l mem pos'
+                           go pos'')
+          go pos
+        Clear offset ->
+          MV.unsafeWrite mem (o2i $ pos + offset) 0 *> mutableEval ops mem pos
+        Mul factor from to -> do
+          x <- MV.unsafeRead mem (o2i $ pos + from)
+          MV.unsafeModify
+            mem
+            (\old -> old + x * factor2i factor)
+            (o2i $ pos + from + to)
+          mutableEval ops mem pos
+        Scan Up offset ->
+          let start = o2i $ pos + offset
+              slice :: v (PrimState m) Int8
+              slice = MV.slice start (MV.length mem - start) mem
+           in do Just idx <- VStream.findIndex (== 0) (MV.mstream slice) -- todo error handling
+                 mutableEval ops mem (MemOffset $ start + idx)
+        Scan Down offset ->
+          let end = o2i $ pos + offset
+              slice :: v (PrimState m) Int8
+              slice = MV.slice 0 (end + 1) mem
+           in do Just idx <- VStream.findIndex (== 0) (MV.mstreamR slice) -- todo error handling
+                 mutableEval ops mem (MemOffset $ end - idx)
+
+o2i :: MemOffset -> Int
+o2i = coerce
+
+{-# INLINE o2i #-}
+factor2i :: MulFactor -> Int8
+factor2i = fromIntegral . (coerce :: MulFactor -> Int)
+
+{-# INLINE factor2i #-}
+-- | Size of the default VM memory, in bytes.
+machineSize :: Word
+machineSize = 30000
+
+-- | A VM 'Machine' with the default memory available.
+emptyMachine :: MachineType
+emptyMachine = mkMachine machineSize
+
+-- | Create a new machine with the given memory
+mkMachine :: Word -> MachineType
+mkMachine n = Machine {memory = GV.replicate (fromIntegral n) 0, pointer = 0}
+
+-- | Command line arguments for the VM evaluator.
+data VMOptions = VMOptions
+  { vmOptsMemoryBytes :: Word -- ^ Available memory in bytes.
+  , vmOptsDumpMemory  :: Bool -- ^ Dump the contents of the memory after executing a program
+  , vmOptsProgramPath :: FilePath -- ^ Path to the compiled program
+  } deriving (Show)
+
+-- | Default configuration for the VM.
+defaultVMOptions :: VMOptions
+defaultVMOptions =
+  VMOptions
+    { vmOptsMemoryBytes = 30000
+    , vmOptsDumpMemory = False
+    , vmOptsProgramPath = ""
+    }
+
+optionsP :: Parser VMOptions
+optionsP =
+  (\mem dump input ->
+     VMOptions
+       { vmOptsMemoryBytes = mem
+       , vmOptsDumpMemory = dump
+       , vmOptsProgramPath = input
+       }) <$>
+  option
+    auto
+    (long "memory" <> short 'm' <> metavar "BYTES" <>
+     value (vmOptsMemoryBytes defaultVMOptions) <>
+     help "Size of the memory [in bytes] used to run the program") <*>
+  switch
+    (long "dump-memory" <> short 'd' <>
+     help "Dump the contents of the memory when the program is finished") <*>
+  argument str (metavar "PROGRAM" <> help "Path to the compiled program")
+
+parserInfo :: ParserInfo VMOptions
+parserInfo =
+  info
+    (optionsP <**> helper)
+    (fullDesc <> progDesc "Run the compiled Brainfuck program in PROGRAM file" <>
+     header "An optimizing Brainfuck compiler and evaluator")
+
+-- | Parse a list of command line arguments
+parsePure :: [String] -> ParserResult VMOptions
+parsePure = execParserPure defaultPrefs parserInfo
+
+-- | Parse a list of command line arguments printing errors to the stderr
+unsafeParse :: [String] -> IO VMOptions
+unsafeParse = handleParseResult . parsePure
+
+-- | Parse command line arguments printing errors to the stderr
+parse :: IO VMOptions
+parse = getArgs >>= unsafeParse
diff --git a/src/HBF/Parser.hs b/src/HBF/Parser.hs
new file mode 100644
--- /dev/null
+++ b/src/HBF/Parser.hs
@@ -0,0 +1,91 @@
+{-|
+Description : Brainfuck parsing
+Copyright   : (c) Sebastian Galkin, 2018
+License     : GPL-3
+
+Parsing 'Text' into 'Program' 'Unparsed'
+-}
+module HBF.Parser
+  ( module HBF.Parser
+  -- * Reexport from "Text.Parsec"
+  , Text.Parsec.ParseError
+  ) where
+
+import           Control.Applicative   ((<|>))
+import           Data.Text.Lazy        (Text)
+import           Text.Parsec           (ParseError, between, eof, many, many1,
+                                        runP)
+import           Text.Parsec.Char      (char, noneOf, oneOf)
+import           Text.Parsec.Text.Lazy (Parser)
+
+import           HBF.Types
+
+-- $setup
+-- >>> :set -XOverloadedStrings
+-- >>> import Data.Either
+-- >>> let parse :: Parser a -> Text -> Either ParseError a; parse p text = runP p () "" text
+
+
+-- | Parser for a full 'Program'.
+--
+-- >>> isRight $ parse program "  +[->>+  +[<] ##garbage## ],.[-]  can ignore garbage"
+-- True
+program :: Parser (Program Unoptimized)
+program = Program <$> many1 operation
+
+-- | Parser for an 'Op', ignoring unknown characters.
+--
+-- >>> parse operation "  +///"
+-- Right (Inc 1 0)
+--
+-- >>> parse operation "fooo  [+>]  baaar  "
+-- Right (Loop [Inc 1 0,Move 1])
+operation :: Parser Op
+operation = many garbage *> (simpleOp <|> loopOp) <* many garbage
+
+-- | The characters allowed in a Brainfuck program except for the loop characters @[@ and @]@.
+bfSimpleTokens :: String
+bfSimpleTokens = "><+-.,"
+
+-- | The characters allowed in a Brainfuck program.
+bfTokens :: String
+bfTokens = "[]" ++ bfSimpleTokens
+
+-- | Parser for unknown characters
+--
+-- >>> parse garbage "this is @#! garbage"
+-- Right 't'
+--
+-- >>> isLeft $ parse garbage "+"
+-- True
+garbage :: Parser Char
+garbage = noneOf bfTokens
+
+-- | Parser for simple operations (not loops).
+--
+-- >>> parse simpleOp ">"
+-- Right (Move 1)
+--
+-- >>> parse simpleOp "."
+-- Right (Out 1 0)
+simpleOp :: Parser Op
+simpleOp = build <$> oneOf bfSimpleTokens
+  where
+    build '>' = Move 1
+    build '<' = Move (-1)
+    build '+' = Inc 1 0
+    build '-' = Inc (-1) 0
+    build '.' = Out 1 0
+    build ',' = In 1 0
+    build _   = error "Unknown character"
+
+-- | Parser for loops.
+--
+-- >>> parse loopOp "[+-]"
+-- Right (Loop [Inc 1 0,Inc (-1) 0])
+loopOp :: Parser Op
+loopOp = Loop . instructions <$> between (char '[') (char ']') program
+
+-- | Parse program stream. Returns an error or the parsed 'Program'
+parseProgram :: Text -> Either ParseError (Program Unoptimized)
+parseProgram = runP (program <* eof) () ""
diff --git a/src/HBF/Types.hs b/src/HBF/Types.hs
new file mode 100644
--- /dev/null
+++ b/src/HBF/Types.hs
@@ -0,0 +1,193 @@
+{-# LANGUAGE DeriveAnyClass             #-}
+{-# LANGUAGE DeriveGeneric              #-}
+{-# LANGUAGE DerivingStrategies         #-}
+{-# LANGUAGE FlexibleInstances          #-}
+{-# LANGUAGE GeneralizedNewtypeDeriving #-}
+{-# LANGUAGE InstanceSigs               #-}
+{-# LANGUAGE RecordWildCards            #-}
+
+{-|
+Description : Basic types for the Brainfuck compiler and virtual machine.
+Copyright   : (c) Sebastian Galkin, 2018
+License     : GPL-3
+
+All the basic types for the Brainfuck compiler and VM are defined in this module.
+This includes the different instructions ('Op's), the 'Program' and the 'MachineIO'.
+-}
+module HBF.Types where
+
+import           Control.DeepSeq                (NFData)
+import           Control.Exception              (catch)
+import           Control.Monad.Trans.State.Lazy (StateT, get, modify, put)
+import           Data.Binary                    (Binary)
+import           Data.Char                      (chr, ord)
+import           Data.Int                       (Int8)
+import           Data.List                      (uncons)
+import           Data.Semigroup                 (Semigroup (..))
+import           GHC.Generics                   (Generic)
+import           System.IO                      (hFlush, stdout)
+
+-- * Virtual Machine Instructions
+-- | Operations or instructions in the Brainfuck virtual machine.
+--
+-- Some of these operations are \"native\" to Brainfuck and others are the result of optimization during compilation.
+-- The compiler generates these types of instructions and the virtual machine can execute them.
+--
+-- In all these instructions the 'MemOffset' represents a shift relative to the current position of the pointer.
+-- The operation will refer and apply its action to this shifted position.
+data Op
+  -- | Increment by the amount specified by the @Int@
+  = Inc {-# UNPACK #-}!Int
+        {-# UNPACK #-}!MemOffset
+  -- | Move the current pointer by the specified amount
+  | Move {-# UNPACK #-}!MemOffset
+  -- | Repeatedly read a byte into the machine and write the last one read to the shifted position.
+  -- @n@ is usually 1 in real programs, but not always. Where the byte is read from will depend on the 'MachineIO' impleentation.
+  | In {-# UNPACK #-}!Int
+       {-# UNPACK #-}!MemOffset
+  -- | Repeatedly write the byte in the shifted position. Where the byte is written will depend on the 'MachineIO' impleentation.
+  | Out {-# UNPACK #-}!Int
+        {-# UNPACK #-}!MemOffset
+  -- | Native Brainfuck looping instruction.
+  | Loop ![Op]
+  -- | Optimized instruction. Set the shifted position to zero. In Brainfuck this is usually written as @[-]@
+  | Clear {-# UNPACK #-}!MemOffset
+  -- | Optimized instruction. Multiply by the factor the byte in the first @MemOffset@, writting to the second one.
+  -- Second @MemOffset@ is relative to the first one. In brainfuck this is usually written as [->+<] and similar
+  -- expressions.
+  | Mul {-# UNPACK #-}!MulFactor
+        {-# UNPACK #-}!MemOffset
+        {-# UNPACK #-}!MemOffset
+  -- | Find the nearest zero in the given direction, starting at the offset position. See 'Direction'.
+  | Scan !Direction
+         {-# UNPACK #-}!MemOffset
+  deriving (Show, Eq, Generic, Binary, NFData)
+
+-- | An offset into the Brainfuck VM memory. Positive numbers are in the direction of higher memory.
+newtype MemOffset =
+  MemOffset Int
+  deriving (Generic)
+  deriving newtype (Show, Eq, Num, Ord)
+  deriving anyclass (Binary, NFData)
+
+-- | A factor to multiply by in the 'Mul' instruction.
+newtype MulFactor =
+  MulFactor Int
+  deriving (Generic)
+  deriving newtype (Show, Eq, Num)
+  deriving anyclass (Binary, NFData)
+
+-- | A direction to 'Scan' for a memory position. 'Up' is in the direction of higher memory.
+data Direction
+  = Up -- ^ Scan in the direction of higher memory.
+  | Down -- ^ Scan in the direction of lower memory.
+  deriving (Show, Eq, Generic)
+  deriving anyclass (Binary, NFData)
+
+-- * Programs
+-- | Marker type to distinguish optimized and 'Unoptimized' 'Program's.
+data Optimized
+
+-- | Marker type to distinguish 'Optimized' and unoptimized 'Program's.
+data Unoptimized
+
+-- | A list of 'Op's. 'opt' will be one of 'Optimized' or 'Unoptimized' to
+-- distinguish both types of programs at the type level.
+newtype Program opt = Program
+  { instructions :: [Op] -- ^ The list of instructions in the program.
+  } deriving (Generic) deriving newtype (Show, Eq) deriving anyclass ( Binary
+                                                                     , NFData
+                                                                     )
+
+-- | Return the full list of instructions in a program, by unrolling 'Loop' instructions
+-- into the list.
+--
+-- >>> flattened $ Program [Inc 1 0, Loop [Move 1, Scan Up 0]]
+-- [Inc 1 0,Move 1,Scan Up 0]
+flattened :: Program o -> [Op]
+flattened p = [atom | op <- instructions p, atom <- atoms op]
+  where
+    atoms (Loop ops) = concatMap atoms ops
+    atoms other      = [other]
+
+-- | Apply '<>' to the underlying @List@ of instructions.
+instance Semigroup (Program o) where
+  Program a <> Program b = Program $ a <> b
+
+-- | The 'Monoid' of the underlying @List@ of instructions.
+instance Monoid (Program o) where
+  mappend = (<>)
+  mempty = Program mempty
+
+-- * Runtime State
+-- | The state of a Brainfuck virtual machine.
+data Machine v = Machine
+  { memory  :: v -- ^ The full memory of the machine. This will be a 'Data.Vector.Unboxed.Vector' or a List.
+  , pointer :: MemOffset -- ^ The current execution pointer, information is written and read at this position.
+  } deriving (Show, Eq)
+
+-- * VM Input/Output
+-- | Provide input and output to a Brainfuck virtual machine.
+--
+-- This class allows to run the VM in different monads, like 'IO' or 'StateT'.
+class MachineIO m where
+  putByte :: Int8 -> m () -- ^ Write the byte to the output of the VM.
+  getByte :: m (Maybe Int8) -- ^ Read a byte from the input of the VM. If @EOF@ has been reached, return 'Nothing'
+
+-- | 'IO' takes its input and output from stdin/stdout
+instance MachineIO IO where
+  putByte = putChar . toEnum . fromIntegral
+  getByte = fmap (fromIntegral . fromEnum) <$> (hFlush stdout >> safeGetChar)
+    where
+      safeGetChar = fmap Just getChar `catch` recover
+      recover :: IOError -> IO (Maybe Char)
+      recover _ = return Nothing
+
+-- * Test Helpers
+-- | A data structure for mocking input and output to the VM. This can be used to run the VM
+-- in a 'StateT' monad for testing purposes.
+data MockIO = MockIO
+  { machineIn  :: [Int8]
+    -- ^ Every time the machine executes an 'In' instruction, input will be taken from this list.
+  , machineOut :: [Int8]
+    -- ^ Every time the machine executes an 'Out' instruction, output will be put into this list, in LIFO order.
+  } deriving (Show, Eq, Generic, NFData)
+
+-- | Create a 'MockIO' that will have the given input available.
+mkMockIO :: [Int8] -> MockIO
+mkMockIO input = MockIO {machineIn = input, machineOut = []}
+
+-- | Create a 'MockIO' that will have the given input available. ASCII encoding.
+mkMockIOS :: String -> MockIO
+mkMockIOS = mkMockIO . map (fromIntegral . ord)
+
+-- | Get the output after a VM has ran using this 'MockIO'.
+mockOutput :: MockIO -> [Int8]
+mockOutput = reverse . machineOut
+
+-- | Get the output after a VM has ran using this 'MockIO'. ASCII encoding.
+mockOutputS :: MockIO -> String
+mockOutputS = map (chr . fromIntegral) . mockOutput
+
+-- | 'StateT' takes its input and output from the lists inside the 'MockIO'.
+instance Monad m => MachineIO (StateT MockIO m) where
+  putByte :: Int8 -> StateT MockIO m ()
+  putByte b = modify update
+    where
+      update st@MockIO {..} = st {machineOut = b : machineOut}
+  getByte :: StateT MockIO m (Maybe Int8)
+  getByte = do
+    st@MockIO {..} <- get
+    maybe (pure Nothing) (update st) $ uncons machineIn
+    where
+      update st (b, bs) = put st {machineIn = bs} >> return (Just b)
+
+-- * Helper Functions
+-- | '<$>' with arguments reversed.
+(<&>) :: Functor f => f a -> (a -> b) -> f b
+(<&>) = flip (<$>)
+
+-- | Helper function to convert a 'Right' into a 'Just' and a 'Left' into a 'Nothing'.
+eitherToMaybe :: Either a b -> Maybe b
+eitherToMaybe (Right b) = Just b
+eitherToMaybe (Left _)  = Nothing
diff --git a/src/exe/hbf/Main.hs b/src/exe/hbf/Main.hs
new file mode 100644
--- /dev/null
+++ b/src/exe/hbf/Main.hs
@@ -0,0 +1,12 @@
+module Main where
+
+import           HBF.Compiler (loadFile)
+import           HBF.Eval     (VMOptions (..), evalWithIO, parse)
+import           System.IO    (hFlush, stdout)
+
+main :: IO ()
+main = do
+  vmOpts <- parse
+  program <- loadFile (vmOptsProgramPath vmOpts)
+  _ <- evalWithIO vmOpts program
+  hFlush stdout
diff --git a/src/exe/hbfc/Main.hs b/src/exe/hbfc/Main.hs
new file mode 100644
--- /dev/null
+++ b/src/exe/hbfc/Main.hs
@@ -0,0 +1,20 @@
+module Main where
+
+import           Data.Monoid  ((<>))
+import           System.Exit  (die)
+
+import           HBF.Compiler (CompilationSummary, ParseError, compile, parse)
+
+main :: IO ()
+main = do
+  compilerOpts <- parse
+  res <- compile compilerOpts
+  either errorOut successOut res
+
+errorOut :: ParseError -> IO ()
+errorOut err = do
+  putStrLn "Error compiling code"
+  die (show err)
+
+successOut :: CompilationSummary -> IO ()
+successOut s = putStrLn $ "Compiled code:\n" <> show s
diff --git a/tests/CompilerTest.hs b/tests/CompilerTest.hs
new file mode 100644
--- /dev/null
+++ b/tests/CompilerTest.hs
@@ -0,0 +1,204 @@
+module CompilerTest where
+
+import           Control.Monad.Trans.State (execStateT)
+import qualified Data.Text.Lazy.IO         as TIO
+import           Hedgehog
+import qualified Hedgehog                  as H
+import           Hedgehog.Checkers         as HC
+import           Test.HUnit
+
+import           HBF.Compiler
+import qualified HBF.Eval                  as E
+import           HBF.Types
+import           Helper
+
+unit_fusionOptimization :: Assertion
+unit_fusionOptimization = fusionOpt (Program p) @?= Program expected
+  where
+    p =
+      [ Inc 2 1
+      , Inc (-1) 1
+      , Move 3
+      , Move (-1)
+      , Inc 1 0
+      , In 1 0
+      , In 2 0
+      , Out 3 0
+      , Out 4 0
+      , Inc 2 0
+      , Inc (-2) 0 -- should eliminate this
+      , Out 1 0 --should not fuse the next two, but should fuse this one with the previous Out
+      , Out 1 1
+      , Out 1 2
+      , Loop
+          [ Inc 1 0
+          , Inc 2 0
+          , Loop [Move 1, Move 2, Clear 0, Clear 0, Clear 1, Clear 2]
+          , Loop [Move 1, Move (-1)] -- should eliminate this whole loop
+          , Scan Up 0
+          , Scan Up 0
+          , Scan Down 3
+          , Scan Down 3
+          , Scan Up 0 -- shouldn't fuse the next two
+          , Scan Up 3
+          , Scan Down 0 -- shouldn't fuse the next two
+          , Scan Down 3
+          ]
+      ]
+    expected =
+      [ Inc 1 1
+      , Move 2
+      , Inc 1 0
+      , In 3 0
+      , Out 8 0
+      , Out 1 1
+      , Out 1 2
+      , Loop
+          [ Inc 3 0
+          , Loop [Move 3, Clear 0, Clear 1, Clear 2]
+          , Scan Up 0
+          , Scan Down 3
+          , Scan Up 0
+          , Scan Up 3
+          , Scan Down 0
+          , Scan Down 3
+          ]
+      ]
+
+unit_optimizationsDontChangeResults :: Assertion
+unit_optimizationsDontChangeResults = do
+  code <- TIO.readFile "tests/factor.bf"
+  let (Right (optimized, _)) = inMemoryCompile defaultCompilerOptions code
+  let (Right (unoptimized, _)) =
+        inMemoryCompile noOptimizationCompilerOptions code
+  a <- exec optimized
+  b <- exec unoptimized
+  a @?= b
+  where
+    exec program = execStateT (E.eval program) (mkMockIOS "25454\n")
+
+fullyFused :: Program o -> Bool
+fullyFused p = all (uncurry fused) (zip ops (tail ops))
+  where
+    ops = instructions p
+    fused (Inc _ n) (Inc _ m)
+      | n == m = False
+    fused (Move _) (Move _) = False
+    fused (In _ n) (In _ m)
+      | n == m = False
+    fused (Out _ n) (Out _ m)
+      | n == m = False
+    fused (Clear n) (Clear m)
+      | n == m = False
+    fused (Loop inner) _ = fullyFused $ Program inner
+    fused _ (Loop inner) = fullyFused $ Program inner
+    fused _ _ = True
+
+unit_fullyFusedTest :: Assertion
+unit_fullyFusedTest =
+  not (fullyFused $ Program [Inc 1 1, Inc 4 1]) &&
+  not (fullyFused $ Program [Inc 1 0, Loop [Inc 1 1, Loop [Move 1, Move 2]]]) &&
+  fullyFused (Program [Inc 1 0, Move 2]) @=? True
+
+hprop_fusionDoesntLeaveAnythingToBeFused :: Property
+hprop_fusionDoesntLeaveAnythingToBeFused =
+  property $ do
+    program <- forAll programGen
+    let optimized = fusionOpt . toIR $ program
+    H.assert $ all noNoOp (flattened optimized) && fullyFused optimized
+  where
+    noNoOp (Inc n _)    = n /= 0
+    noNoOp (Move n)     = n /= 0
+    noNoOp (In n _)     = n /= 0
+    noNoOp (Out n _)    = n /= 0
+    noNoOp (Clear _)    = True
+    noNoOp (Mul _ _ to) = to /= 0
+    noNoOp (Scan _ _)   = True
+    noNoOp (Loop _)     = error "noNoOp: unexpected operation"
+
+hprop_FusedProgramHasValidMonoid :: Property
+hprop_FusedProgramHasValidMonoid = property $ HC.monoid programGen
+
+unit_clearOptimization :: Assertion
+unit_clearOptimization = clearOpt (Program p) @?= Program expected
+  where
+    p =
+      [ Inc 2 0
+      , Inc (-1) 0
+      , Loop [Inc (-1) 0]
+      , Loop
+          [ Inc 1 0
+          , Loop [Inc (-1) 0]
+          , Loop [Loop [Inc (-1) 0], Move 3, Loop [Inc (-1) 0]]
+          ]
+      ]
+    expected =
+      [ Inc 2 0
+      , Inc (-1) 0
+      , Clear 0
+      , Loop [Inc 1 0, Clear 0, Loop [Clear 0, Move 3, Clear 0]]
+      ]
+
+unit_mulOptimization :: Assertion
+unit_mulOptimization = mulOpt (Program p) @?= Program expected
+  where
+    p =
+      [ Inc 2 0
+      , Inc (-1) 0
+      , makeMul [(1, 2)]
+      , Loop [Inc (-1) 0, makeMul [(2, 4), (4, 5)], Inc 1 0]
+      , Loop [Inc (-1) 0, Move 1, Inc 1 0, Move (-1), Inc 1 0] {- this extra part breaks the multiplication loop -}
+         -- this tests missing eof
+      ]
+    expected =
+      [ Inc 2 0
+      , Inc (-1) 0
+      , Mul 1 0 2
+      , Clear 0
+      , Loop [Inc (-1) 0, Mul 2 0 4, Mul 4 0 9, Clear 0, Inc 1 0]
+      , Loop [Inc (-1) 0, Move 1, Inc 1 0, Move (-1), Inc 1 0]
+      ]
+
+unit_scanOptimization :: Assertion
+unit_scanOptimization = scanOpt (Program p) @?= Program expected
+  where
+    p =
+      [ Inc 2 0
+      , Inc (-1) 0
+      , Loop [Move (-1)]
+      , Loop [Inc (-1) 0, Loop [Move 1], Loop [Move 2], Inc 1 0]
+      ]
+    expected =
+      [ Inc 2 0
+      , Inc (-1) 0
+      , Scan Down 0
+      , Loop [Inc (-1) 0, Scan Up 0, Loop [Move 2], Inc 1 0]
+      ]
+
+unit_offsetInstructionsOptimization :: Assertion
+unit_offsetInstructionsOptimization =
+  offsetInstructionOpt (Program p) @?= Program expected
+  where
+    p =
+      [ Inc 2 0
+      , Move 1
+      , Inc (-1) 0
+      , Move 2
+      , Mul 3 0 2
+      , Loop [Move (-1)]
+      , Loop
+          [ Inc (-1) 0
+          , Move (-1)
+          , In 1 0
+          , Loop [Move 2, Inc 3 0, Move (-1)]
+          , Inc 1 0
+          ]
+      ]
+    expected =
+      [ Inc 2 0
+      , Inc (-1) 1
+      , Mul 3 3 2
+      , Move 3
+      , Loop [Move (-1)]
+      , Loop [Inc (-1) 0, In 1 (-1), Move (-1), Loop [Inc 3 2, Move 1], Inc 1 0]
+      ]
diff --git a/tests/EvalTest.hs b/tests/EvalTest.hs
new file mode 100644
--- /dev/null
+++ b/tests/EvalTest.hs
@@ -0,0 +1,89 @@
+module EvalTest where
+
+import           Control.Monad.Trans.State (runStateT)
+import           Data.Char                 (ord)
+import           Data.Int                  (Int8)
+import qualified Data.Text.Lazy.IO         as TIO
+import qualified Data.Vector.Generic       as GV
+import           Test.HUnit
+import           Test.SmallCheck
+
+import qualified HBF.Compiler              as C
+import qualified HBF.Eval                  as E
+import           HBF.Types
+import           Helper
+
+unit_canFactorNumbers :: Assertion
+unit_canFactorNumbers = do
+  (_, out) <- execFile "tests/factor.bf" "25454\n"
+  out @?= "25454: 2 11 13 89\n"
+
+unit_evalScanR :: Assertion
+unit_evalScanR = do
+  (machine, _) <- execProgramS program ""
+  let (Machine mem index) = listMachine machine
+  (index, take 6 mem) @?= (4, [42, 42, 42, 42, 17, 0])
+  where
+    program -- evaluating should give [42,42,42,42,17,0,...]
+     = Program [Inc 42 0, Mul 1 0 1, Mul 1 0 2, Mul 1 0 3, Scan Up 0, Inc 17 0]
+
+unit_evalScanL :: Assertion
+unit_evalScanL = do
+  (machine, _) <- execProgramS program ""
+  let (Machine mem index) = listMachine machine
+  (index, take 6 mem) @?= (1, [0, 17, 42, 42, 42, 0])
+  where
+    program -- evaluating should give [0,17,42,42,42,0,...]
+     = Program [Move 2, Inc 42 0, Mul 1 0 1, Mul 1 0 2, Scan Down 0, Inc 17 0]
+
+unit_evalScanROnZero :: Assertion
+unit_evalScanROnZero = do
+  (machine, _) <- execProgramS program ""
+  let (Machine mem index) = listMachine machine
+  (index, take 4 mem) @?= (1, [42, 0, 42, 0])
+  where
+    program -- evaluating should give [42,0,42,0,...]
+     = Program [Inc 42 0, Move 2, Inc 42 0, Move (-1), Scan Up 0]
+
+unit_evalScanLOnZero :: Assertion
+unit_evalScanLOnZero = do
+  (machine, _) <- execProgramS program ""
+  let (Machine mem index) = listMachine machine
+  (index, take 4 mem) @?= (1, [42, 0, 42, 0])
+  where
+    program -- evaluating should give [42,0,42,0,...]
+     = Program [Inc 42 0, Move 2, Inc 42 0, Move (-1), Scan Down 0]
+
+-- todo: implement a property test starting with arbitrary memory
+-- and evaluating ScanR and ScanL
+scprop_allOptimizationFlagsSameResult :: CompFlags -> Property IO
+scprop_allOptimizationFlagsSameResult (CompFlags opts) =
+  monadic $ do
+    code <- TIO.readFile "tests/allfeatures.bf"
+    let (Right (program, _)) = C.inMemoryCompile opts code
+    (finalMachine, finalState) <- execProgram program (mkMockIOS "0")
+    pure $
+      mockOutputS finalState == expectedOutput &&
+      memory finalMachine == expectedMemory
+  where
+    expectedOutput = "AABFAq"
+    expectedMemory =
+      memory E.emptyMachine GV.//
+      zip [0 ..] [fromIntegral (ord '0' + ord 'A') :: Int8, 0, 0, 0, 1, 1, 70]
+
+unit_evalWithSmallMemory :: Assertion
+unit_evalWithSmallMemory = do
+  code <- TIO.readFile "tests/allfeatures.bf"
+  let (Right (program, _)) = C.inMemoryCompile C.defaultCompilerOptions code
+  (finalMachine, finalState) <-
+    runStateT
+      (E.evalWith E.defaultVMOptions {E.vmOptsMemoryBytes = bytes} program)
+      (mkMockIOS "0")
+  mockOutputS finalState @?= expectedOutput
+  memory finalMachine @?= expectedMemory
+  where
+    bytes = 7 :: Word
+    expectedOutput = "AABFAq"
+    expectedMemory =
+      memory (E.mkMachine bytes) GV.//
+      zip [0 ..] [fromIntegral (ord '0' + ord 'A') :: Int8, 0, 0, 0, 1, 1, 70]
diff --git a/tests/Helper.hs b/tests/Helper.hs
new file mode 100644
--- /dev/null
+++ b/tests/Helper.hs
@@ -0,0 +1,139 @@
+{-# LANGUAGE FlexibleInstances     #-}
+{-# LANGUAGE MultiParamTypeClasses #-}
+{-# LANGUAGE OverloadedStrings     #-}
+
+-- needed for smallcheck
+module Helper where
+
+import           Control.Monad.Trans.State (runStateT)
+import           Data.Coerce               (coerce)
+import           Data.Int                  (Int8)
+import           Data.Semigroup            ((<>))
+import           Data.Text.Lazy            (Text, pack)
+import qualified Data.Text.Lazy.IO         as TIO
+import qualified Data.Vector.Unboxed       as Vector
+import           Hedgehog                  (Gen)
+import qualified Hedgehog.Gen              as Gen
+import qualified Hedgehog.Range            as Range
+import           Test.SmallCheck.Series
+
+import           HBF.Compiler              (CompilerOptions (..),
+                                            defaultCompilerOptions,
+                                            inMemoryCompile)
+import           HBF.Eval                  (MachineType, eval)
+import           HBF.Parser
+import           HBF.Types
+
+basicOpCharGen :: Gen Char
+basicOpCharGen = Gen.element bfSimpleTokens
+
+commentCodeGen :: Gen Char
+commentCodeGen = Gen.filter (not . flip elem bfTokens) Gen.unicode
+
+basicCodeGen :: Gen Text
+basicCodeGen = pack <$> Gen.filter hasCode strings
+  where
+    chars = Gen.frequency [(5, basicOpCharGen), (2, commentCodeGen)]
+    strings = Gen.list (Range.linear 1 100) chars
+    hasCode :: String -> Bool
+    hasCode = any (`elem` bfSimpleTokens)
+
+loopGen :: Gen Text
+loopGen = fmap (\code -> "[" <> code <> "]") codeGen
+
+codeGen :: Gen Text
+codeGen = (<>) <$> block <*> block
+  where
+    block = Gen.frequency [(10, basicCodeGen), (1, loopGen)]
+
+programGen :: Gen (Program Unoptimized)
+programGen =
+  Program . concat <$>
+  Gen.list
+    (Range.linear 0 120)
+    (Gen.recursive weights [basic] [(: []) . Loop . instructions <$> programGen])
+  where
+    basic :: Gen [Op]
+    basic =
+      Gen.frequency
+        [ (100, pure [Inc 1 0])
+        , (50, pure [Inc (-1) 0])
+        , (80, pure [Move (-1)])
+        , (70, pure [Move 1])
+        , (5, pure [Out 1 0])
+        , (2, pure [In 1 0])
+        , (10, (\b -> b ++ b) <$> basic) --fusable
+        , (3, pure [Loop [Move (-1)]]) --scanL
+        , (2, pure [Loop [Move 1]]) --scanR
+        , (1, pure [Loop [Inc (-1) 0]]) --clear loop
+        , ( 1
+          , pure
+              [ Inc (-1) 0
+              , Move 1
+              , Inc 1 0
+              , Inc 1 0
+              , Move 1
+              , Move 1
+              , Inc (-1) 0
+              , Move (-1)
+              , Move (-1)
+              ]) --mul loop --fixme use makeMul
+        ]
+    weights [nonrec] = nonrec
+    weights (nonrec:recursive:_) = Gen.frequency [(10, nonrec), (1, recursive)]
+    weights [] = error "programGen: unexpected condition"
+
+makeMul :: [(MulFactor, MemOffset)] -> Op
+makeMul muls =
+  Loop $
+  (Inc (-1) 0 : concatMap mkMul muls) ++
+  replicate (coerce $ sum $ map snd muls) (Move (-1))
+  where
+    mkMul (MulFactor fact, MemOffset off) =
+      replicate off (Move 1) ++ replicate fact (Inc 1 0)
+
+listMachine :: Machine (Vector.Vector Int8) -> Machine [Int8]
+listMachine t = t {memory = Vector.toList (memory t)}
+
+newtype CompFlags =
+  CompFlags CompilerOptions
+  deriving (Show)
+
+instance Monad m => Serial m CompFlags where
+  series =
+    cons5
+      (\a b c d e ->
+         CompFlags
+           CompilerOptions
+             { cOptsOut = Nothing
+             , cOptsFusionOptimization = a
+             , cOptsClearLoopOptimization = b
+             , cOptsMulOptimization = c
+             , cOptsScanOptimization = d
+             , cOptsOffsetInstructionsOptimization = e
+             , cOptsVerbose = False
+             , cOptsSource = ""
+             })
+
+cons5 ::
+     (Serial m a5, Serial m a4, Serial m a3, Serial m a2, Serial m a1)
+  => (a1 -> a2 -> a3 -> a4 -> a5 -> a6)
+  -> Series m a6
+cons5 f = decDepth $ f <$> series <~> series <~> series <~> series <~> series
+
+execProgram :: Program Optimized -> MockIO -> IO (MachineType, MockIO)
+execProgram p = runStateT (eval p)
+
+execProgramS :: Program Optimized -> String -> IO (MachineType, MockIO)
+execProgramS p input = runStateT (eval p) (mkMockIOS input)
+
+execCodeMock :: Text -> String -> IO (MachineType, MockIO)
+execCodeMock code input = execProgram p (mkMockIOS input)
+  where
+    (Right (p, _)) = inMemoryCompile defaultCompilerOptions code
+
+execCode :: Text -> String -> IO (MachineType, String)
+execCode code input = fmap mockOutputS <$> execCodeMock code input
+
+execFile :: FilePath -> String -> IO (MachineType, String)
+execFile p input = TIO.readFile p >>= \code -> execCode code input
diff --git a/tests/IntegrationTests.hs b/tests/IntegrationTests.hs
new file mode 100644
--- /dev/null
+++ b/tests/IntegrationTests.hs
@@ -0,0 +1,35 @@
+{-# LANGUAGE OverloadedStrings #-}
+
+module IntegrationTests where
+
+import           Control.Monad.Trans.State (execStateT)
+import           System.IO                 (hClose)
+import           System.IO.Temp            (withSystemTempFile)
+import           Test.HUnit
+
+import qualified HBF.Compiler              as C
+import qualified HBF.Eval                  as E
+import           HBF.Types
+
+squaresPath :: FilePath
+squaresPath = "tests/squares.bf"
+
+squaresResult :: String
+squaresResult = concatMap ((++ "\n") . show) sq
+  where
+    sq :: [Int]
+    sq = takeWhile (<= 10000) $ map (\n -> n * n) [0 ..]
+
+compile :: FilePath -> IO (Program Optimized)
+compile inpath =
+  withSystemTempFile "hbftests.bfc" $ \outpath handle -> do
+    hClose handle
+    cOpts <- C.unsafeParse ["--output", outpath, inpath]
+    Right _ <- C.compile cOpts
+    C.loadFile outpath
+
+unit_compileAndEvalSquares :: Assertion
+unit_compileAndEvalSquares = do
+  program <- compile squaresPath
+  mock <- execStateT (E.eval program) (mkMockIO [])
+  mockOutputS mock @?= squaresResult
diff --git a/tests/ParserTest.hs b/tests/ParserTest.hs
new file mode 100644
--- /dev/null
+++ b/tests/ParserTest.hs
@@ -0,0 +1,42 @@
+{-# LANGUAGE OverloadedStrings #-}
+
+module ParserTest where
+
+import           Data.Either    (isLeft, isRight)
+import           Data.Semigroup ((<>))
+import           Hedgehog
+import qualified Hedgehog       as H
+import qualified Hedgehog.Gen   as Gen
+import           Test.HUnit
+import qualified Test.HUnit     as HU
+
+import           HBF.Parser
+import           HBF.Types
+import           Helper
+
+unit_parseBasicProgram :: Assertion
+unit_parseBasicProgram =
+  parseProgram "+><-[+,.[-]<<]" @?= Right (Program result)
+  where
+    result =
+      [ Inc 1 0
+      , Move 1
+      , Move (-1)
+      , Inc (-1) 0
+      , Loop [Inc 1 0, In 1 0, Out 1 0, Loop [Inc (-1) 0], Move (-1), Move (-1)]
+      ]
+
+unit_cantParseEmpty :: Assertion
+unit_cantParseEmpty = HU.assert $ isLeft $ parseProgram ""
+
+hprop_parseRandomPrograms :: Property
+hprop_parseRandomPrograms =
+  property $ forAll codeGen >>= H.assert . isRight . parseProgram
+
+hprop_cantParseUnbalancedLoop :: Property
+hprop_cantParseUnbalancedLoop =
+  property $ do
+    p1 <- forAll $ Gen.frequency [(10, codeGen), (1, Gen.constant "")]
+    p2 <- forAll $ Gen.frequency [(10, codeGen), (1, Gen.constant "")]
+    braket <- forAll $ Gen.element ["[", "]"]
+    H.assert $ isLeft $ parseProgram (p1 <> braket <> p2)
diff --git a/tests/allfeatures.bf b/tests/allfeatures.bf
new file mode 100644
--- /dev/null
+++ b/tests/allfeatures.bf
@@ -0,0 +1,86 @@
+write a number 65 in position 1 by multiplying 6 by 10 and adding 5
+
+++++++  this is a 6
+[->++++++++++ (10 times)<]  a multiplication loop
+
+> +++++
+
+at this point memory should be (0 65# 0 0 0 etc)
+
+print an A
+
+.
+
+> > + > + > +-+
+
+(0 65 0 1 1 1# 0 0 etc)
+
+[<]
+
+(0 65 0# 1 1 1 0 0 etc)
+
+copy twice the 65 before
+
+<
+[->+>+<<]
+
+(0 0# 65 66 1 1 0 0 etc)
+
+Print A and B
+>.>.
+
+move to the first 0 to the right
+[>]
+
+(0 0 65 66 1 1 0# 0 etc)
+
+put a negative by adding 128 and wrapping
+++++++++++
+++++++++++
+++++++++++
+++++++++++
+++++++++++
+++++++++++
+++++++++++
+++++++++++
+++++++++++
+++++++++++
+++++++++++
+++++++++++
+++++++++
+
+multiply the 66 by 3 putting in the zero
+
+<<<
+[->>>+++<<<]
+
+
+(0 0 65 0# 1 1 70 0 etc)
+
+>>>
+
+print F
+.
+
+[<]
+<
+
+print A
+.
+
+(0 0 65# 0 1 1 70 0 etc)
+
+get some data
+<,
+
+add it to 65 in position 0
+
+[-<+>]
+>
+[-<<+>>]
+
+
+(65 plus x 0 0# 0 1 1 70 0 etc)
+
+print the result (if a 0 was the input it should print a q (48 plus 65)
+<<.
diff --git a/tests/doctest.hs b/tests/doctest.hs
new file mode 100644
--- /dev/null
+++ b/tests/doctest.hs
@@ -0,0 +1,4 @@
+import Test.DocTest
+
+main :: IO ()
+main = doctest ["-isrc", "src/HBF"]
diff --git a/tests/factor.bf b/tests/factor.bf
new file mode 100644
--- /dev/null
+++ b/tests/factor.bf
@@ -0,0 +1,195 @@
+* factor an arbitrarily large positive integer
+*
+* Copyright (C) 1999 by Brian Raiter
+* under the GNU General Public License
+
+>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>-
+
+*
+* read in the number
+*
+
+<<<<<<<<<+
+[-[>>>>>>>>>>][-]<<<<<<<<<<[[->>>>>>>>>>+<<<<<<<<<<]<<<<<<<<<<]
+  >>>>>>>>>>,----------]
+>>>>>>>>>>[------------------------------------->>>>>>>>>->]
+<[+>[>>>>>>>>>+>]<-<<<<<<<<<<]-
+
+*
+* display the number and initialize the loop variable to two
+*
+
+[>++++++++++++++++++++++++++++++++++++++++++++++++.
+  ------------------------------------------------<<<<<<<<<<<]
+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++.
+--------------------------.[-]
+>>>>>>>>>>>>++<<<<+
+
+*
+* the main loop
+*
+
+[ [-]>>
+
+  *
+  * make copies of the number and the loop variable
+  *
+
+  [>>>>[-]>[-]>[-]>[-]
+    >[-]>[-]
+    <<<<<<<[->>>+>+<<<<]>>>>>>>>]
+  <<<<<<<<<<[>>>>>>[-<<<<+>>>>]<<<<<<<<<<<<<<<<]>>>>>>>>>>
+  [>[->>>+>>+<<<<<]>>>>>>>>>]
+  <<<<<<<<<<[>>>>>>[-<<<<<+>>>>>]<<<<<<<<<<<<<<<<]>>>>>>>>>>
+
+  *
+  * divide the number by the loop variable
+  *
+
+  [>>>[-]>>>[-]>[-]>>>]                                  initialize
+  <<<<<<<<<<[<<<<<<<<<<]
+  >>>>>>>>>[-]>>>>>>>+<<<<<<<<[+]+
+  [ ->>                               double divisor until above dividend
+    [>>>>>>[->++<]>>>>]<<<<<<<<<<
+    [>>>>>>>>[-]>[-]
+       <<<<[->>>++<<<]<<<<<<<<<<<<<<<]>>>>>>>>>>
+    [>>>>>>>>[->+<[->+<[->+<[->+<[->+<[->+<[->+<[->+<[->+<
+            [->--------->>>>>>>>>+<<<<<<<<<<[->+<]]]]]]]]]]]>>]
+    <<<<<<<<<<[>>>>>>>>>[-<+<<<+>>>>]<<<<<<<<<<<<<<<<<<<]>>>>>>>>>>
+    [>>>>>>>[-<+>[-<+>[-<+>[-<+>[-<+>[-<+>[-<+>[-<+>[-<+>
+            [-<--------->>>>>>>>>>>+<<<<<<<<<<[-<+>]]]]]]]]]]]>>>]
+    <<<<<<<<<<
+    [>>>>[->>>+>>+<<<<<]<<<<<<<<<<<<<<]
+    >>>>>>>>>>[>>>>>>>[-<<<+>>>]>>>]<<<<<<<<<<
+    [>>>>>>>>[->-<]>
+      [<<<<<<<<<[<[-]>>>>>>>>>>[-<<<<<<<<<<+>>>>>>>>>>]<<<<<<<<<<<<<<<<<<<]
+        >>>>>>>>>>>>>>>>>>>]
+      <<<<<<<<<<<<<<<<<<<]
+    >>>>>>>>>[+[+[+[+[+[+[+[+[+[+[[-]<+>]]]]]]]]]]]<
+  ]
+  >>>>>>>>
+  [                                   subtract divisor from dividend
+    <<<<<<
+    [>>>>>>>>[-]>[-]<<<<<[->>>+>+<<<<]>>>>>>]<<<<<<<<<<
+    [>>>>>>>>[-<<<<+>>>>]<<<[->>>+>+<<<<]<<<<<<<<<<<<<<<]>>>>>>>>>>
+    [>>>>>>>>>[-<<<<+>>>>]>]<<<<<<<<<<
+    [>>>>>>>>[-<->]<<<<<<<<<<<<<<<<<<]>>>>>>>>>>
+    [>>>>>>>[->+<[->+<[->+<[->+<[->+<[->+<[->+<[->+<[->+<[->+<
+            [++++++++++[+>-<]>>>>>>>>>>-<<<<<<<<<<]]]]]]]]]]]>>>]
+    >>>>>>>+
+    [                                 if difference is nonnegative then
+      [-]<<<<<<<<<<<<<<<<<            replace dividend and increment quotient
+      [>>>>[-]>>>>[-<<<<+>>>>]<<[->>+<<]<<<<<<<<<<<<<<<<]>>>>>>>>>>
+      [>>>>>>>>[->+<<<+>>]>>]<<<<<<<<<<
+      [>>>[->>>>>>+<<<<<<]<<<<<<<<<<<<<]>>>>>>>>>>
+      [>>>>>>>>>[-<<<<<<+>>>>>>[-<<<<<<+>>>>>>
+                [-<<<<<<+>>>>>>[-<<<<<<+>>>>>>
+                [-<<<<<<+>>>>>>[-<<<<<<+>>>>>>
+                [-<<<<<<+>>>>>>[-<<<<<<+>>>>>>
+                [-<<<<<<+>>>>>>[-<<<<<<--------->>>>>>>>>>>>>>>>+<<<<<<<<<<
+                [-<<<<<<+>>>>>>]]]]]]]]]]]>]
+      >>>>>>>
+    ]                                 halve divisor and loop until zero
+    <<<<<<<<<<<<<<<<<[<<<<<<<<<<]>>>>>>>>>>
+    [>>>>>>>>[-]<<[->+<]<[->>>+<<<]>>>>>]<<<<<<<<<<
+    [+>>>>>>>[-<<<<<<<+>>>>>>>[-<<<<<<<->>>>>>+>
+             [-<<<<<<<+>>>>>>>[-<<<<<<<->>>>>>+>
+             [-<<<<<<<+>>>>>>>[-<<<<<<<->>>>>>+>
+             [-<<<<<<<+>>>>>>>[-<<<<<<<->>>>>>+>
+             [-<<<<<<<+>>>>>>>]]]]]]]]]<<<<<<<
+             [->>>>>>>+<<<<<<<]-<<<<<<<<<<]
+    >>>>>>>
+    [-<<<<<<<<<<<+>>>>>>>>>>>]
+      >>>[>>>>>>>[-<<<<<<<<<<<+++++>>>>>>>>>>>]>>>]<<<<<<<<<<
+    [+>>>>>>>>[-<<<<<<<<+>>>>>>>>[-<<<<<<<<->>>>>+>>>
+              [-<<<<<<<<+>>>>>>>>[-<<<<<<<<->>>>>+>>>
+              [-<<<<<<<<+>>>>>>>>[-<<<<<<<<->>>>>+>>>
+              [-<<<<<<<<+>>>>>>>>[-<<<<<<<<->>>>>+>>>
+              [-<<<<<<<<+>>>>>>>>]]]]]]]]]<<<<<<<<
+              [->>>>>>>>+<<<<<<<<]-<<<<<<<<<<]
+    >>>>>>>>[-<<<<<<<<<<<<<+>>>>>>>>>>>>>]>>
+    [>>>>>>>>[-<<<<<<<<<<<<<+++++>>>>>>>>>>>>>]>>]<<<<<<<<<<
+    [<<<<<<<<<<]>>>>>>>>>>
+    >>>>>>
+  ]
+  <<<<<<
+
+  *
+  * make copies of the loop variable and the quotient
+  *
+
+  [>>>[->>>>+>+<<<<<]>>>>>>>]
+  <<<<<<<<<<
+  [>>>>>>>[-<<<<+>>>>]<<<<<[->>>>>+>>+<<<<<<<]<<<<<<<<<<<<]
+  >>>>>>>>>>[>>>>>>>[-<<<<<+>>>>>]>>>]<<<<<<<<<<
+
+  *
+  * break out of the loop if the quotient is larger than the loop variable
+  *
+
+  [>>>>>>>>>[-<->]<
+    [<<<<<<<<
+      [<<[-]>>>>>>>>>>[-<<<<<<<<<<+>>>>>>>>>>]<<<<<<<<<<<<<<<<<<]
+    >>>>>>>>>>>>>>>>>>]<<<<<<<<<<<<<<<<<<]
+  >>>>>>>>[>-<[+[+[+[+[+[+[+[+[+[[-]>+<]]]]]]]]]]]>+
+
+  [ [-]
+
+    *
+    * partially increment the loop variable
+    *
+
+    <[-]+>>>>+>>>>>>>>[>>>>>>>>>>]<<<<<<<<<<
+
+    *
+    * examine the remainder for nonzero digits
+    *
+
+    [<<<<<<[<<<<[<<<<<<<<<<]>>>>+<<<<<<<<<<]<<<<]
+    >>>>>>>>>>>>>>>>>>>>[>>>>>>>>>>]<<<<<<<<<<[<<<<<<<<<<]
+    >>>>-
+
+    [ [+]
+
+      *
+      * decrement the loop variable and replace the number with the quotient
+      *
+
+      >>>>>>>>-<<[>[-]>>[-<<+>>]>>>>>>>]<<<<<<<<<<
+
+      *
+      * display the loop variable
+      *
+
+      [+>>[>>>>>>>>+>>]<<-<<<<<<<<<<]-
+      [>>++++++++++++++++++++++++++++++++++++++++++++++++.
+         ------------------------------------------------<<<<<<<<<<<<]
+      ++++++++++++++++++++++++++++++++.[-]>>>>
+
+    ]
+
+    *
+    * normalize the loop variable
+    *
+
+    >>>>>>
+    [>>[->>>>>+<<<<<[->>>>>+<<<<<
+       [->>>>>+<<<<<[->>>>>+<<<<<
+       [->>>>>+<<<<<[->>>>>+<<<<<
+       [->>>>>+<<<<<[->>>>>+<<<<<
+       [->>>>>+<<<<<[->>>>>--------->>>>>+<<<<<<<<<<
+       [->>>>>+<<<<<]]]]]]]]]]]>>>>>>>>]
+    <<<<<<<<<<[>>>>>>>[-<<<<<+>>>>>]<<<<<<<<<<<<<<<<<]
+    >>>>>>>>>
+
+  ]<
+
+]>>
+
+*
+* display the number and end
+*
+
+[>>>>>>>>>>]<<<<<<<<<<[+>[>>>>>>>>>+>]<-<<<<<<<<<<]-
+[>++++++++++++++++++++++++++++++++++++++++++++++++.<<<<<<<<<<<]
+++++++++++.
diff --git a/tests/squares.bf b/tests/squares.bf
new file mode 100644
--- /dev/null
+++ b/tests/squares.bf
@@ -0,0 +1,8 @@
+++++[>+++++<-]>[<+++++>-]+<+[
+    >[>+>+<<-]++>>[<<+>>-]>>>[-]++>[-]+
+    >>>+[[-]++++++>>>]<<<[[<++++++++<++>>-]+<.<[>----<-]<]
+    <<[>>>>>[>>>[-]+++++++++<[>-<-]+++++++++>[-[<->-]+[<<<]]<[>+<-]>]<<-]<<-
+]
+[Outputs square numbers from 0 to 10000.
+Daniel B Cristofani (cristofdathevanetdotcom)
+http://www.hevanet.com/cristofd/brainfuck/]
diff --git a/tests/test.hs b/tests/test.hs
new file mode 100644
--- /dev/null
+++ b/tests/test.hs
@@ -0,0 +1,1 @@
+{-# OPTIONS_GHC -F -pgmF tasty-discover #-}
