hPDB 1.2.0.4 → 1.2.0.5
raw patch · 2 files changed
+5/−2 lines, 2 filesdep ~basePVP: major bump suggested
API removals or changes: PVP suggests a major version bump
Dependency ranges changed: base
API changes (from Hackage documentation)
- Bio.PDB: [Atom] :: !String -> !Int -> !Vector3 -> !Double -> !Double -> !String -> !String -> !String -> !Bool -> Atom
- Bio.PDB: [Chain] :: !Char -> List Residue -> Chain
- Bio.PDB: [Model] :: !Int -> List Chain -> Model
- Bio.PDB: [Residue] :: !String -> !Int -> List Atom -> !Char -> Residue
- Bio.PDB: [Structure] :: List Model -> Structure
- Bio.PDB.EventParser.ExperimentalMethods: [ElectronCrystallography] :: ExpMethod
- Bio.PDB.EventParser.ExperimentalMethods: [ElectronMicroscopy] :: ExpMethod
- Bio.PDB.EventParser.ExperimentalMethods: [FiberDiffraction] :: ExpMethod
- Bio.PDB.EventParser.ExperimentalMethods: [NeutronDiffraction] :: ExpMethod
- Bio.PDB.EventParser.ExperimentalMethods: [OtherExpMethod] :: !ByteString -> ExpMethod
- Bio.PDB.EventParser.ExperimentalMethods: [SolidStateNMR] :: ExpMethod
- Bio.PDB.EventParser.ExperimentalMethods: [SolutionNMR] :: ExpMethod
- Bio.PDB.EventParser.ExperimentalMethods: [SolutionScattering] :: ExpMethod
- Bio.PDB.EventParser.ExperimentalMethods: [XRayDiffraction] :: ExpMethod
- Bio.PDB.EventParser.ExperimentalMethods: instance Eq ExpMethod
- Bio.PDB.EventParser.ExperimentalMethods: instance Ord ExpMethod
- Bio.PDB.EventParser.ExperimentalMethods: instance Read ExpMethod
- Bio.PDB.EventParser.ExperimentalMethods: instance Show ExpMethod
- Bio.PDB.EventParser.HelixTypes: instance Eq HelixT
- Bio.PDB.EventParser.HelixTypes: instance Ord HelixT
- Bio.PDB.EventParser.HelixTypes: instance Read HelixT
- Bio.PDB.EventParser.HelixTypes: instance Show HelixT
- Bio.PDB.EventParser.PDBEvents: [ANISOU] :: !Int -> !String -> !String -> !Char -> !Int -> !Char -> !Char -> !Int -> !Int -> !Int -> !Int -> !Int -> !Int -> !String -> !String -> !String -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [ATID] :: (String, String, Char, Int, Char) -> ATID
- Bio.PDB.EventParser.PDBEvents: [ATOM] :: !Int -> !String -> !String -> !Char -> !Int -> !Char -> !Char -> !Vector3 -> !Double -> !Double -> !String -> !String -> !String -> !Bool -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [AUTHOR] :: !Int -> ![String] -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [Antiparallel] :: StrandSenseT
- Bio.PDB.EventParser.PDBEvents: [CAVEAT] :: !Int -> !String -> !String -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [CISPEP] :: !Int -> !RESID -> !RESID -> !Int -> Maybe Double -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [COMPND] :: !Int -> ![(String, String)] -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [CONECT] :: ![Int] -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [CRYST1] :: !Double -> !Double -> !Double -> !Double -> !Double -> !Double -> !String -> !Int -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [DBREF] :: !String -> !Char -> !Int -> !Char -> !Int -> !Char -> !String -> !String -> !String -> !Int -> !Char -> !Int -> !Char -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [ENDMDL] :: PDBEvent
- Bio.PDB.EventParser.PDBEvents: [END] :: PDBEvent
- Bio.PDB.EventParser.PDBEvents: [EXPDTA] :: !Int -> ![ExpMethod] -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [ElectronCrystallography] :: ExpMethod
- Bio.PDB.EventParser.PDBEvents: [ElectronMicroscopy] :: ExpMethod
- Bio.PDB.EventParser.PDBEvents: [FORMUL] :: !Int -> !String -> !Int -> !Bool -> ![String] -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [FiberDiffraction] :: ExpMethod
- Bio.PDB.EventParser.PDBEvents: [HEADER] :: !String -> !String -> !String -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [HELIX] :: Int -> RESID -> RESID -> HelixT -> String -> Int -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [HETNAM] :: !Int -> !String -> !String -> !Bool -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [HET] :: !String -> !Char -> !Int -> !Char -> !Int -> !String -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [HYDBND] :: !ATID -> !Char -> !ATID -> !Char -> !ATID -> !Char -> !String -> !String -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [JRNL] :: !Int -> ![(String, String)] -> !Bool -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [KEYWDS] :: !Int -> ![String] -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [LINK] :: !ATID -> !Char -> !ATID -> !Char -> !String -> !String -> Maybe Double -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [MASTER] :: !Int -> !Int -> !Int -> !Int -> !Int -> !Int -> !Int -> !Int -> !Int -> !Int -> !Int -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [MDLTYP] :: !Int -> ![String] -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [MODEL] :: !Int -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [MODRES] :: !String -> !RESID -> !String -> !String -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [MTRIXn] :: !Int -> !Bool -> !Int -> ![Vector3] -> ![Double] -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [NUMMDL] :: !Int -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [NeutronDiffraction] :: ExpMethod
- Bio.PDB.EventParser.PDBEvents: [OBSLTE] :: !Int -> !String -> !String -> ![String] -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [ORIGXn] :: Int -> [Vector3] -> [Double] -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [OtherExpMethod] :: !ByteString -> ExpMethod
- Bio.PDB.EventParser.PDBEvents: [PDBIgnoredLine] :: ByteString -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [PDBParseError] :: !Int -> !Int -> !String -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [Parallel] :: StrandSenseT
- Bio.PDB.EventParser.PDBEvents: [REMARK] :: !Int -> ![String] -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [RESID] :: (String, Char, Int, Char) -> RESID
- Bio.PDB.EventParser.PDBEvents: [REVDAT] :: !Int -> !Int -> !String -> !String -> !Int -> ![String] -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [SCALEn] :: Int -> [Vector3] -> [Double] -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [SEQADV] :: !String -> Maybe RESID -> !String -> !String -> !String -> Maybe Int -> !String -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [SEQRES] :: !Int -> !Char -> !Int -> ![String] -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [SHEET] :: Int -> String -> Int -> Maybe StrandSenseT -> RESID -> RESID -> Maybe ATID -> Maybe ATID -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [SIGATM] :: !Int -> !String -> !String -> !Char -> !Int -> !Char -> !Char -> !Vector3 -> !Double -> !Double -> !String -> !String -> !String -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [SIGUIJ] :: !Int -> !String -> !String -> !Char -> !Int -> !Char -> !Char -> !Int -> !Int -> !Int -> !Int -> !Int -> !Int -> !String -> !String -> !String -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [SITE] :: !Int -> !String -> !Int -> ![RESID] -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [SLTBRG] :: !ATID -> !Char -> !ATID -> !Char -> !String -> !String -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [SOURCE] :: !Int -> ![(String, String)] -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [SPLIT] :: !Int -> ![String] -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [SPRSDE] :: !Int -> !String -> !String -> ![String] -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [SSBOND] :: !Int -> RESID -> RESID -> !String -> !String -> !Double -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [SolidStateNMR] :: ExpMethod
- Bio.PDB.EventParser.PDBEvents: [SolutionNMR] :: ExpMethod
- Bio.PDB.EventParser.PDBEvents: [SolutionScattering] :: ExpMethod
- Bio.PDB.EventParser.PDBEvents: [TER] :: !Int -> !String -> !Char -> !Int -> !Char -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [TITLE] :: !Int -> !String -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [TVECT] :: !Int -> Vector3 -> PDBEvent
- Bio.PDB.EventParser.PDBEvents: [Vector3] :: UnpkScalar -> UnpkScalar -> UnpkScalar -> Vector3
- Bio.PDB.EventParser.PDBEvents: [XRayDiffraction] :: ExpMethod
- Bio.PDB.EventParser.PDBEvents: instance Eq ATID
- Bio.PDB.EventParser.PDBEvents: instance Eq PDBEvent
- Bio.PDB.EventParser.PDBEvents: instance Eq RESID
- Bio.PDB.EventParser.PDBEvents: instance Ord ATID
- Bio.PDB.EventParser.PDBEvents: instance Ord RESID
- Bio.PDB.EventParser.PDBEvents: instance Show ATID
- Bio.PDB.EventParser.PDBEvents: instance Show PDBEvent
- Bio.PDB.EventParser.PDBEvents: instance Show RESID
- Bio.PDB.EventParser.StrandSense: [Antiparallel] :: StrandSenseT
- Bio.PDB.EventParser.StrandSense: [Parallel] :: StrandSenseT
- Bio.PDB.EventParser.StrandSense: instance Eq StrandSenseT
- Bio.PDB.EventParser.StrandSense: instance Ord StrandSenseT
- Bio.PDB.EventParser.StrandSense: instance Read StrandSenseT
- Bio.PDB.EventParser.StrandSense: instance Show StrandSenseT
- Bio.PDB.Structure: [Atom] :: !String -> !Int -> !Vector3 -> !Double -> !Double -> !String -> !String -> !String -> !Bool -> Atom
- Bio.PDB.Structure: [Chain] :: !Char -> List Residue -> Chain
- Bio.PDB.Structure: [Model] :: !Int -> List Chain -> Model
- Bio.PDB.Structure: [Residue] :: !String -> !Int -> List Atom -> !Char -> Residue
- Bio.PDB.Structure: [Structure] :: List Model -> Structure
- Bio.PDB.Structure: instance Constructor C1_0Atom
- Bio.PDB.Structure: instance Constructor C1_0Chain
- Bio.PDB.Structure: instance Constructor C1_0Model
- Bio.PDB.Structure: instance Constructor C1_0Residue
- Bio.PDB.Structure: instance Constructor C1_0Structure
- Bio.PDB.Structure: instance Datatype D1Atom
- Bio.PDB.Structure: instance Datatype D1Chain
- Bio.PDB.Structure: instance Datatype D1Model
- Bio.PDB.Structure: instance Datatype D1Residue
- Bio.PDB.Structure: instance Datatype D1Structure
- Bio.PDB.Structure: instance Eq Atom
- Bio.PDB.Structure: instance Eq Chain
- Bio.PDB.Structure: instance Eq Model
- Bio.PDB.Structure: instance Eq Residue
- Bio.PDB.Structure: instance Eq Structure
- Bio.PDB.Structure: instance Generic Atom
- Bio.PDB.Structure: instance Generic Chain
- Bio.PDB.Structure: instance Generic Model
- Bio.PDB.Structure: instance Generic Residue
- Bio.PDB.Structure: instance Generic Structure
- Bio.PDB.Structure: instance NFData Atom
- Bio.PDB.Structure: instance NFData Chain
- Bio.PDB.Structure: instance NFData Model
- Bio.PDB.Structure: instance NFData Residue
- Bio.PDB.Structure: instance NFData Structure
- Bio.PDB.Structure: instance Selector S1_0_0Atom
- Bio.PDB.Structure: instance Selector S1_0_0Chain
- Bio.PDB.Structure: instance Selector S1_0_0Model
- Bio.PDB.Structure: instance Selector S1_0_0Residue
- Bio.PDB.Structure: instance Selector S1_0_0Structure
- Bio.PDB.Structure: instance Selector S1_0_1Atom
- Bio.PDB.Structure: instance Selector S1_0_1Chain
- Bio.PDB.Structure: instance Selector S1_0_1Model
- Bio.PDB.Structure: instance Selector S1_0_1Residue
- Bio.PDB.Structure: instance Selector S1_0_2Atom
- Bio.PDB.Structure: instance Selector S1_0_2Residue
- Bio.PDB.Structure: instance Selector S1_0_3Atom
- Bio.PDB.Structure: instance Selector S1_0_3Residue
- Bio.PDB.Structure: instance Selector S1_0_4Atom
- Bio.PDB.Structure: instance Selector S1_0_5Atom
- Bio.PDB.Structure: instance Selector S1_0_6Atom
- Bio.PDB.Structure: instance Selector S1_0_7Atom
- Bio.PDB.Structure: instance Selector S1_0_8Atom
- Bio.PDB.Structure: instance Show Atom
- Bio.PDB.Structure: instance Show Chain
- Bio.PDB.Structure: instance Show Model
- Bio.PDB.Structure: instance Show Residue
- Bio.PDB.Structure: instance Show Structure
- Bio.PDB.Structure.List: instance NFData (TempList m a)
- Bio.PDB.Structure.Vector: [Vector3] :: UnpkScalar -> UnpkScalar -> UnpkScalar -> Vector3
- Bio.PDB.Structure.Vector: instance Arbitrary Vector3
- Bio.PDB.StructurePrinter: instance PDBWritable Atom
- Bio.PDB.StructurePrinter: instance PDBWritable Chain
- Bio.PDB.StructurePrinter: instance PDBWritable Model
- Bio.PDB.StructurePrinter: instance PDBWritable Residue
- Bio.PDB.StructurePrinter: instance PDBWritable Structure
+ Bio.PDB: Atom :: !String -> !Int -> !Vector3 -> !Double -> !Double -> !String -> !String -> !String -> !Bool -> Atom
+ Bio.PDB: Chain :: !Char -> List Residue -> Chain
+ Bio.PDB: Model :: !Int -> List Chain -> Model
+ Bio.PDB: Residue :: !String -> !Int -> List Atom -> !Char -> Residue
+ Bio.PDB: Structure :: List Model -> Structure
+ Bio.PDB.EventParser.ExperimentalMethods: ElectronCrystallography :: ExpMethod
+ Bio.PDB.EventParser.ExperimentalMethods: ElectronMicroscopy :: ExpMethod
+ Bio.PDB.EventParser.ExperimentalMethods: FiberDiffraction :: ExpMethod
+ Bio.PDB.EventParser.ExperimentalMethods: NeutronDiffraction :: ExpMethod
+ Bio.PDB.EventParser.ExperimentalMethods: OtherExpMethod :: !ByteString -> ExpMethod
+ Bio.PDB.EventParser.ExperimentalMethods: SolidStateNMR :: ExpMethod
+ Bio.PDB.EventParser.ExperimentalMethods: SolutionNMR :: ExpMethod
+ Bio.PDB.EventParser.ExperimentalMethods: SolutionScattering :: ExpMethod
+ Bio.PDB.EventParser.ExperimentalMethods: XRayDiffraction :: ExpMethod
+ Bio.PDB.EventParser.ExperimentalMethods: instance GHC.Classes.Eq Bio.PDB.EventParser.ExperimentalMethods.ExpMethod
+ Bio.PDB.EventParser.ExperimentalMethods: instance GHC.Classes.Ord Bio.PDB.EventParser.ExperimentalMethods.ExpMethod
+ Bio.PDB.EventParser.ExperimentalMethods: instance GHC.Read.Read Bio.PDB.EventParser.ExperimentalMethods.ExpMethod
+ Bio.PDB.EventParser.ExperimentalMethods: instance GHC.Show.Show Bio.PDB.EventParser.ExperimentalMethods.ExpMethod
+ Bio.PDB.EventParser.HelixTypes: instance GHC.Classes.Eq Bio.PDB.EventParser.HelixTypes.HelixT
+ Bio.PDB.EventParser.HelixTypes: instance GHC.Classes.Ord Bio.PDB.EventParser.HelixTypes.HelixT
+ Bio.PDB.EventParser.HelixTypes: instance GHC.Read.Read Bio.PDB.EventParser.HelixTypes.HelixT
+ Bio.PDB.EventParser.HelixTypes: instance GHC.Show.Show Bio.PDB.EventParser.HelixTypes.HelixT
+ Bio.PDB.EventParser.PDBEvents: ANISOU :: !Int -> !String -> !String -> !Char -> !Int -> !Char -> !Char -> !Int -> !Int -> !Int -> !Int -> !Int -> !Int -> !String -> !String -> !String -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: ATID :: (String, String, Char, Int, Char) -> ATID
+ Bio.PDB.EventParser.PDBEvents: ATOM :: !Int -> !String -> !String -> !Char -> !Int -> !Char -> !Char -> !Vector3 -> !Double -> !Double -> !String -> !String -> !String -> !Bool -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: AUTHOR :: !Int -> ![String] -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: Antiparallel :: StrandSenseT
+ Bio.PDB.EventParser.PDBEvents: CAVEAT :: !Int -> !String -> !String -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: CISPEP :: !Int -> !RESID -> !RESID -> !Int -> Maybe Double -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: COMPND :: !Int -> ![(String, String)] -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: CONECT :: ![Int] -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: CRYST1 :: !Double -> !Double -> !Double -> !Double -> !Double -> !Double -> !String -> !Int -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: DBREF :: !String -> !Char -> !Int -> !Char -> !Int -> !Char -> !String -> !String -> !String -> !Int -> !Char -> !Int -> !Char -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: END :: PDBEvent
+ Bio.PDB.EventParser.PDBEvents: ENDMDL :: PDBEvent
+ Bio.PDB.EventParser.PDBEvents: EXPDTA :: !Int -> ![ExpMethod] -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: ElectronCrystallography :: ExpMethod
+ Bio.PDB.EventParser.PDBEvents: ElectronMicroscopy :: ExpMethod
+ Bio.PDB.EventParser.PDBEvents: FORMUL :: !Int -> !String -> !Int -> !Bool -> ![String] -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: FiberDiffraction :: ExpMethod
+ Bio.PDB.EventParser.PDBEvents: HEADER :: !String -> !String -> !String -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: HELIX :: Int -> RESID -> RESID -> HelixT -> String -> Int -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: HET :: !String -> !Char -> !Int -> !Char -> !Int -> !String -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: HETNAM :: !Int -> !String -> !String -> !Bool -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: HYDBND :: !ATID -> !Char -> !ATID -> !Char -> !ATID -> !Char -> !String -> !String -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: JRNL :: !Int -> ![(String, String)] -> !Bool -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: KEYWDS :: !Int -> ![String] -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: LINK :: !ATID -> !Char -> !ATID -> !Char -> !String -> !String -> Maybe Double -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: MASTER :: !Int -> !Int -> !Int -> !Int -> !Int -> !Int -> !Int -> !Int -> !Int -> !Int -> !Int -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: MDLTYP :: !Int -> ![String] -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: MODEL :: !Int -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: MODRES :: !String -> !RESID -> !String -> !String -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: MTRIXn :: !Int -> !Bool -> !Int -> ![Vector3] -> ![Double] -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: NUMMDL :: !Int -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: NeutronDiffraction :: ExpMethod
+ Bio.PDB.EventParser.PDBEvents: OBSLTE :: !Int -> !String -> !String -> ![String] -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: ORIGXn :: Int -> [Vector3] -> [Double] -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: OtherExpMethod :: !ByteString -> ExpMethod
+ Bio.PDB.EventParser.PDBEvents: PDBIgnoredLine :: ByteString -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: PDBParseError :: !Int -> !Int -> !String -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: Parallel :: StrandSenseT
+ Bio.PDB.EventParser.PDBEvents: REMARK :: !Int -> ![String] -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: RESID :: (String, Char, Int, Char) -> RESID
+ Bio.PDB.EventParser.PDBEvents: REVDAT :: !Int -> !Int -> !String -> !String -> !Int -> ![String] -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: SCALEn :: Int -> [Vector3] -> [Double] -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: SEQADV :: !String -> Maybe RESID -> !String -> !String -> !String -> Maybe Int -> !String -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: SEQRES :: !Int -> !Char -> !Int -> ![String] -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: SHEET :: Int -> String -> Int -> Maybe StrandSenseT -> RESID -> RESID -> Maybe ATID -> Maybe ATID -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: SIGATM :: !Int -> !String -> !String -> !Char -> !Int -> !Char -> !Char -> !Vector3 -> !Double -> !Double -> !String -> !String -> !String -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: SIGUIJ :: !Int -> !String -> !String -> !Char -> !Int -> !Char -> !Char -> !Int -> !Int -> !Int -> !Int -> !Int -> !Int -> !String -> !String -> !String -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: SITE :: !Int -> !String -> !Int -> ![RESID] -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: SLTBRG :: !ATID -> !Char -> !ATID -> !Char -> !String -> !String -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: SOURCE :: !Int -> ![(String, String)] -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: SPLIT :: !Int -> ![String] -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: SPRSDE :: !Int -> !String -> !String -> ![String] -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: SSBOND :: !Int -> RESID -> RESID -> !String -> !String -> !Double -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: SolidStateNMR :: ExpMethod
+ Bio.PDB.EventParser.PDBEvents: SolutionNMR :: ExpMethod
+ Bio.PDB.EventParser.PDBEvents: SolutionScattering :: ExpMethod
+ Bio.PDB.EventParser.PDBEvents: TER :: !Int -> !String -> !Char -> !Int -> !Char -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: TITLE :: !Int -> !String -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: TVECT :: !Int -> Vector3 -> PDBEvent
+ Bio.PDB.EventParser.PDBEvents: Vector3 :: UnpkScalar -> UnpkScalar -> UnpkScalar -> Vector3
+ Bio.PDB.EventParser.PDBEvents: XRayDiffraction :: ExpMethod
+ Bio.PDB.EventParser.PDBEvents: instance GHC.Classes.Eq Bio.PDB.EventParser.PDBEvents.ATID
+ Bio.PDB.EventParser.PDBEvents: instance GHC.Classes.Eq Bio.PDB.EventParser.PDBEvents.PDBEvent
+ Bio.PDB.EventParser.PDBEvents: instance GHC.Classes.Eq Bio.PDB.EventParser.PDBEvents.RESID
+ Bio.PDB.EventParser.PDBEvents: instance GHC.Classes.Ord Bio.PDB.EventParser.PDBEvents.ATID
+ Bio.PDB.EventParser.PDBEvents: instance GHC.Classes.Ord Bio.PDB.EventParser.PDBEvents.RESID
+ Bio.PDB.EventParser.PDBEvents: instance GHC.Show.Show Bio.PDB.EventParser.PDBEvents.ATID
+ Bio.PDB.EventParser.PDBEvents: instance GHC.Show.Show Bio.PDB.EventParser.PDBEvents.PDBEvent
+ Bio.PDB.EventParser.PDBEvents: instance GHC.Show.Show Bio.PDB.EventParser.PDBEvents.RESID
+ Bio.PDB.EventParser.StrandSense: Antiparallel :: StrandSenseT
+ Bio.PDB.EventParser.StrandSense: Parallel :: StrandSenseT
+ Bio.PDB.EventParser.StrandSense: instance GHC.Classes.Eq Bio.PDB.EventParser.StrandSense.StrandSenseT
+ Bio.PDB.EventParser.StrandSense: instance GHC.Classes.Ord Bio.PDB.EventParser.StrandSense.StrandSenseT
+ Bio.PDB.EventParser.StrandSense: instance GHC.Read.Read Bio.PDB.EventParser.StrandSense.StrandSenseT
+ Bio.PDB.EventParser.StrandSense: instance GHC.Show.Show Bio.PDB.EventParser.StrandSense.StrandSenseT
+ Bio.PDB.Structure: Atom :: !String -> !Int -> !Vector3 -> !Double -> !Double -> !String -> !String -> !String -> !Bool -> Atom
+ Bio.PDB.Structure: Chain :: !Char -> List Residue -> Chain
+ Bio.PDB.Structure: Model :: !Int -> List Chain -> Model
+ Bio.PDB.Structure: Residue :: !String -> !Int -> List Atom -> !Char -> Residue
+ Bio.PDB.Structure: Structure :: List Model -> Structure
+ Bio.PDB.Structure: instance Control.DeepSeq.NFData Bio.PDB.Structure.Atom
+ Bio.PDB.Structure: instance Control.DeepSeq.NFData Bio.PDB.Structure.Chain
+ Bio.PDB.Structure: instance Control.DeepSeq.NFData Bio.PDB.Structure.Model
+ Bio.PDB.Structure: instance Control.DeepSeq.NFData Bio.PDB.Structure.Residue
+ Bio.PDB.Structure: instance Control.DeepSeq.NFData Bio.PDB.Structure.Structure
+ Bio.PDB.Structure: instance GHC.Classes.Eq Bio.PDB.Structure.Atom
+ Bio.PDB.Structure: instance GHC.Classes.Eq Bio.PDB.Structure.Chain
+ Bio.PDB.Structure: instance GHC.Classes.Eq Bio.PDB.Structure.Model
+ Bio.PDB.Structure: instance GHC.Classes.Eq Bio.PDB.Structure.Residue
+ Bio.PDB.Structure: instance GHC.Classes.Eq Bio.PDB.Structure.Structure
+ Bio.PDB.Structure: instance GHC.Generics.Constructor Bio.PDB.Structure.C1_0Atom
+ Bio.PDB.Structure: instance GHC.Generics.Constructor Bio.PDB.Structure.C1_0Chain
+ Bio.PDB.Structure: instance GHC.Generics.Constructor Bio.PDB.Structure.C1_0Model
+ Bio.PDB.Structure: instance GHC.Generics.Constructor Bio.PDB.Structure.C1_0Residue
+ Bio.PDB.Structure: instance GHC.Generics.Constructor Bio.PDB.Structure.C1_0Structure
+ Bio.PDB.Structure: instance GHC.Generics.Datatype Bio.PDB.Structure.D1Atom
+ Bio.PDB.Structure: instance GHC.Generics.Datatype Bio.PDB.Structure.D1Chain
+ Bio.PDB.Structure: instance GHC.Generics.Datatype Bio.PDB.Structure.D1Model
+ Bio.PDB.Structure: instance GHC.Generics.Datatype Bio.PDB.Structure.D1Residue
+ Bio.PDB.Structure: instance GHC.Generics.Datatype Bio.PDB.Structure.D1Structure
+ Bio.PDB.Structure: instance GHC.Generics.Generic Bio.PDB.Structure.Atom
+ Bio.PDB.Structure: instance GHC.Generics.Generic Bio.PDB.Structure.Chain
+ Bio.PDB.Structure: instance GHC.Generics.Generic Bio.PDB.Structure.Model
+ Bio.PDB.Structure: instance GHC.Generics.Generic Bio.PDB.Structure.Residue
+ Bio.PDB.Structure: instance GHC.Generics.Generic Bio.PDB.Structure.Structure
+ Bio.PDB.Structure: instance GHC.Generics.Selector Bio.PDB.Structure.S1_0_0Atom
+ Bio.PDB.Structure: instance GHC.Generics.Selector Bio.PDB.Structure.S1_0_0Chain
+ Bio.PDB.Structure: instance GHC.Generics.Selector Bio.PDB.Structure.S1_0_0Model
+ Bio.PDB.Structure: instance GHC.Generics.Selector Bio.PDB.Structure.S1_0_0Residue
+ Bio.PDB.Structure: instance GHC.Generics.Selector Bio.PDB.Structure.S1_0_0Structure
+ Bio.PDB.Structure: instance GHC.Generics.Selector Bio.PDB.Structure.S1_0_1Atom
+ Bio.PDB.Structure: instance GHC.Generics.Selector Bio.PDB.Structure.S1_0_1Chain
+ Bio.PDB.Structure: instance GHC.Generics.Selector Bio.PDB.Structure.S1_0_1Model
+ Bio.PDB.Structure: instance GHC.Generics.Selector Bio.PDB.Structure.S1_0_1Residue
+ Bio.PDB.Structure: instance GHC.Generics.Selector Bio.PDB.Structure.S1_0_2Atom
+ Bio.PDB.Structure: instance GHC.Generics.Selector Bio.PDB.Structure.S1_0_2Residue
+ Bio.PDB.Structure: instance GHC.Generics.Selector Bio.PDB.Structure.S1_0_3Atom
+ Bio.PDB.Structure: instance GHC.Generics.Selector Bio.PDB.Structure.S1_0_3Residue
+ Bio.PDB.Structure: instance GHC.Generics.Selector Bio.PDB.Structure.S1_0_4Atom
+ Bio.PDB.Structure: instance GHC.Generics.Selector Bio.PDB.Structure.S1_0_5Atom
+ Bio.PDB.Structure: instance GHC.Generics.Selector Bio.PDB.Structure.S1_0_6Atom
+ Bio.PDB.Structure: instance GHC.Generics.Selector Bio.PDB.Structure.S1_0_7Atom
+ Bio.PDB.Structure: instance GHC.Generics.Selector Bio.PDB.Structure.S1_0_8Atom
+ Bio.PDB.Structure: instance GHC.Show.Show Bio.PDB.Structure.Atom
+ Bio.PDB.Structure: instance GHC.Show.Show Bio.PDB.Structure.Chain
+ Bio.PDB.Structure: instance GHC.Show.Show Bio.PDB.Structure.Model
+ Bio.PDB.Structure: instance GHC.Show.Show Bio.PDB.Structure.Residue
+ Bio.PDB.Structure: instance GHC.Show.Show Bio.PDB.Structure.Structure
+ Bio.PDB.Structure.List: instance Control.DeepSeq.NFData (Bio.PDB.Structure.List.TempList m a)
+ Bio.PDB.Structure.Vector: Vector3 :: UnpkScalar -> UnpkScalar -> UnpkScalar -> Vector3
+ Bio.PDB.Structure.Vector: instance Test.QuickCheck.Arbitrary.Arbitrary Data.Vector.V3.Vector3
+ Bio.PDB.StructurePrinter: instance Bio.PDB.StructurePrinter.PDBWritable Bio.PDB.Structure.Atom
+ Bio.PDB.StructurePrinter: instance Bio.PDB.StructurePrinter.PDBWritable Bio.PDB.Structure.Chain
+ Bio.PDB.StructurePrinter: instance Bio.PDB.StructurePrinter.PDBWritable Bio.PDB.Structure.Model
+ Bio.PDB.StructurePrinter: instance Bio.PDB.StructurePrinter.PDBWritable Bio.PDB.Structure.Residue
+ Bio.PDB.StructurePrinter: instance Bio.PDB.StructurePrinter.PDBWritable Bio.PDB.Structure.Structure
Files
- changelog +3/−0
- hPDB.cabal +2/−2
changelog view
@@ -1,4 +1,7 @@ -*-Changelog-*-+1.2.0.5 Jun 2016+ * Relaxed dependencies for GHC 8.0.+ 1.2.0.4 Jun 2015 * Cleaned, added some documentation.
hPDB.cabal view
@@ -1,5 +1,5 @@ name: hPDB-version: 1.2.0.4+version: 1.2.0.5 synopsis: Protein Databank file format library homepage: https://github.com/BioHaskell/hPDB stability: stable@@ -57,7 +57,7 @@ Library ghc-options: -fspec-constr-count=4 -O3 - build-depends: base>=4.0, base <4.9, ghc-prim, directory, mtl, template-haskell, vector, AC-Vector, containers, deepseq, QuickCheck >= 2.5.0.0, text>=0.11.1.13, iterable >= 3.0, tagged >= 0.7, parallel >= 3.0.0.0, bytestring, zlib, Octree>= 0.5+ build-depends: base>=4.0, base <4.10, ghc-prim, directory, mtl, template-haskell, vector, AC-Vector, containers, deepseq, QuickCheck >= 2.5.0.0, text>=0.11.1.13, iterable >= 3.0, tagged >= 0.7, parallel >= 3.0.0.0, bytestring, zlib, Octree>= 0.5 if flag(have-sse2) ghc-options: -msse2 if flag(have-mmap)