diff --git a/README.md b/README.md --- a/README.md +++ b/README.md @@ -3,5 +3,8 @@ Haskell PDB file format parser - example scripts. [![Build Status](https://api.travis-ci.org/BioHaskell/hPDB-examples.png?branch=master)](https://travis-ci.org/BioHaskell/hPDB-examples) +[![Hackage](https://budueba.com/hackage/hPDB-examples)](https://hackage.haskell.org/package/hPDB-examples) Details on official releases are on [Hackage](http://hackage.haskell.org/package/hPDB-examples). + +This package is also a part of [Stackage](http://daniel-diaz.github.io/stackagelist/) - a stable subset of Hackage. diff --git a/hPDB-examples.cabal b/hPDB-examples.cabal --- a/hPDB-examples.cabal +++ b/hPDB-examples.cabal @@ -1,8 +1,8 @@ name: hPDB-examples -version: 1.1.1 +version: 1.1.2 synopsis: Examples for hPDB library stability: stable -homepage: https://github.com/mgajda/hpdb-examples +homepage: https://github.com/BioHaskell/hPDB-examples package-url: http://hackage.haskell.org/package/hPDB description: Examples for handling Protein Data Bank file format. category: Bioinformatics @@ -16,73 +16,72 @@ build-type: Simple cabal-version: >=1.8 -tested-with: GHC==7.0.3, GHC==7.2.2, GHC==7.4.1, GHC==7.4.2, GHC==7.6.1, GHC==7.6.2 ---Need to re-test: GHC==6.12.1, GHC==7.0.4, GHC==7.1.20101026 +tested-with: GHC==7.0.3, GHC==7.2.2, GHC==7.4.1, GHC==7.4.2, GHC==7.6.1, GHC==7.6.2, GHC==7.6.3 --data-files: 1CRN.pdb, 1HTQ.pdb, 3JYV.pdb extra-source-files: README.md INSTALL AUTHORS source-repository head type: git - location: https://github.com/mgajda/hPDB-examples + location: https://github.com/BioHaskell/hPDB-examples.git Executable PDB2Fasta main-is: examples/PDB2Fasta.hs - ghc-options: -fspec-constr-count=4 -O3 - build-depends: base>=4.0, base <4.8, bytestring, ghc-prim, directory, mtl, template-haskell, vector, AC-Vector, containers, deepseq, QuickCheck >= 2.5.0.0, text>=0.11.1.13, hPDB >= 1.1, iterable >=2.0 + ghc-options: -fspec-constr-count=4 -O3 -threaded -rtsopts -with-rtsopts=-N + build-depends: base>=4.0, base <4.9, bytestring, ghc-prim, directory, mtl, template-haskell, vector, AC-Vector, containers, deepseq, QuickCheck >= 2.5.0.0, text>=0.11.1.13, hPDB >= 1.1, iterable >=2.0 other-extensions: ScopedTypeVariables OverloadedStrings BangPatterns NoMonomorphismRestriction EmptyDataDecls MagicHash Executable ShiftToCenter main-is: examples/ShiftToCenter.hs - ghc-options: -fspec-constr-count=4 -O3 - build-depends: base>=4.0, base <4.7, ghc-prim, directory, mtl, template-haskell, vector, AC-Vector, containers, deepseq,QuickCheck >= 2.5.0.0, text>=0.11.1.13, hPDB >= 0.999, bytestring, iterable >=1.0 + ghc-options: -fspec-constr-count=4 -O3 -threaded -rtsopts -with-rtsopts=-N + build-depends: base>=4.0, base<4.9, ghc-prim, directory, mtl, template-haskell, vector, AC-Vector, containers, deepseq,QuickCheck >= 2.5.0.0, text>=0.11.1.13, hPDB >= 0.999, bytestring, iterable >=1.0 other-extensions: ScopedTypeVariables OverloadedStrings BangPatterns NoMonomorphismRestriction EmptyDataDecls MagicHash Executable CleanPDB main-is: examples/CleanPDB.hs - ghc-options: -fspec-constr-count=4 -O3 - build-depends: base>=4.0, base <4.7, bytestring, ghc-prim, directory, mtl, template-haskell, vector, AC-Vector, containers, deepseq,QuickCheck >= 2.5.0.0, text>=0.11.1.13, hPDB >= 0.999, iterable >=1.0 + ghc-options: -fspec-constr-count=4 -O3 -threaded -rtsopts -with-rtsopts=-N + build-depends: base>=4.0, base <4.9, bytestring, ghc-prim, directory, mtl, template-haskell, vector, AC-Vector, containers, deepseq,QuickCheck >= 2.5.0.0, text>=0.11.1.13, hPDB >= 0.999, iterable >=1.0 other-extensions: ScopedTypeVariables OverloadedStrings BangPatterns NoMonomorphismRestriction EmptyDataDecls MagicHash Executable SplitModels main-is: examples/SplitModels.hs - ghc-options: -fspec-constr-count=4 -O3 - build-depends: base>=4.0, base <4.7, ghc-prim, directory, mtl, template-haskell, vector, AC-Vector, containers, deepseq,QuickCheck >= 2.5.0.0, text>=0.11.1.13, hPDB >= 0.999, bytestring, iterable >=1.0 + ghc-options: -fspec-constr-count=4 -O3 -threaded -rtsopts -with-rtsopts=-N + build-depends: base>=4.0, base <4.9, ghc-prim, directory, mtl, template-haskell, vector, AC-Vector, containers, deepseq,QuickCheck >= 2.5.0.0, text>=0.11.1.13, hPDB >= 0.999, bytestring, iterable >=1.0 other-extensions: ScopedTypeVariables OverloadedStrings BangPatterns NoMonomorphismRestriction EmptyDataDecls MagicHash Executable CanonicalAxes main-is: examples/CanonicalAxes.hs - ghc-options: -fspec-constr-count=4 -O3 - Build-depends: base>=4.0, base <4.7, bytestring, ghc-prim, directory, mtl, template-haskell, vector, AC-Vector, containers, deepseq,QuickCheck >= 2.5.0.0, text>=0.11.1.13, hPDB >= 0.999, iterable >=1.0 + ghc-options: -fspec-constr-count=4 -O3 -threaded -rtsopts -with-rtsopts=-N + Build-depends: base>=4.0, base <4.9, bytestring, ghc-prim, directory, mtl, template-haskell, vector, AC-Vector, containers, deepseq,QuickCheck >= 2.5.0.0, text>=0.11.1.13, hPDB >= 0.999, iterable >=1.0 other-extensions: ScopedTypeVariables OverloadedStrings BangPatterns NoMonomorphismRestriction EmptyDataDecls MagicHash Executable PrintEvents Main-is: tests/PrintEvents.hs - ghc-options: -fspec-constr-count=4 -O3 - Build-depends: base>=4.0, base <4.7, bytestring, ghc-prim, directory, mtl, template-haskell, vector, AC-Vector, containers, deepseq, QuickCheck >= 2.5.0.0, text>=0.11.1.13, hPDB >= 0.999, iterable >=1.0 + ghc-options: -fspec-constr-count=4 -O3 -threaded -rtsopts -with-rtsopts=-N + Build-depends: base>=4.0, base <4.9, bytestring, ghc-prim, directory, mtl, template-haskell, vector, AC-Vector, containers, deepseq, QuickCheck >= 2.5.0.0, text>=0.11.1.13, hPDB >= 0.999, iterable >=1.0 other-extensions: ScopedTypeVariables OverloadedStrings BangPatterns NoMonomorphismRestriction EmptyDataDecls Executable PrintStructureObject - ghc-options: -fspec-constr-count=4 -O3 - Build-depends: base>=4.0, base <4.7, bytestring, ghc-prim, directory, mtl, template-haskell, vector, AC-Vector, containers, deepseq,QuickCheck >= 2.5.0.0, text>=0.11.1.13, hPDB >= 0.999, iterable >=1.0 + ghc-options: -fspec-constr-count=4 -O3 -threaded -rtsopts -with-rtsopts=-N + Build-depends: base>=4.0, base <4.9, bytestring, ghc-prim, directory, mtl, template-haskell, vector, AC-Vector, containers, deepseq,QuickCheck >= 2.5.0.0, text>=0.11.1.13, hPDB >= 0.999, iterable >=1.0 Main-is: tests/PrintStructureObject.hs other-extensions: ScopedTypeVariables OverloadedStrings BangPatterns NoMonomorphismRestriction EmptyDataDecls Executable Rg main-is: examples/Rg.hs - ghc-options: -fspec-constr-count=4 -O3 - Build-depends: base>=4.0, base <4.7, ghc-prim, bytestring, directory, mtl, template-haskell, vector, AC-Vector, containers, deepseq,QuickCheck >= 2.5.0.0, text>=0.11.1.13, hPDB >= 0.999, iterable >=1.0 + ghc-options: -fspec-constr-count=4 -O3 -threaded -rtsopts -with-rtsopts=-N + Build-depends: base>=4.0, base <4.9, ghc-prim, bytestring, directory, mtl, template-haskell, vector, AC-Vector, containers, deepseq,QuickCheck >= 2.5.0.0, text>=0.11.1.13, hPDB >= 0.999, iterable >=1.0 other-extensions: ScopedTypeVariables OverloadedStrings BangPatterns NoMonomorphismRestriction EmptyDataDecls Executable StericClashCheck main-is: examples/StericClashCheck.hs - ghc-options: -fspec-constr-count=4 -O3 - Build-Depends: base>=4.0, base<4.7, bytestring, ghc-prim, directory, mtl, template-haskell, vector, AC-Vector, containers, deepseq, Octree >= 0.5, QuickCheck, text, text-format, hPDB >= 0.999, iterable >=1.0 + ghc-options: -fspec-constr-count=4 -O3 -threaded -rtsopts -with-rtsopts=-N + Build-Depends: base>=4.0, base<4.9, bytestring, ghc-prim, directory, mtl, template-haskell, vector, AC-Vector, containers, deepseq, Octree >= 0.5, QuickCheck, text, text-format, hPDB >= 0.999, iterable >=1.0 other-extensions: ScopedTypeVariables OverloadedStrings BangPatterns NoMonomorphismRestriction EmptyDataDecls -- if flag(haveOpenGL) -- why can't we make it conditionally available? Executable Viewer main-is: examples/Viewer.hs - ghc-options: -fspec-constr-count=4 -O3 - Build-depends: base>=4.0, base <4.7, ghc-prim, directory, mtl, template-haskell, vector, AC-Vector, containers, deepseq,QuickCheck >= 2.5.0.0, text>=0.11.1.13, OpenGL, GLUT, hPDB >= 0.999, bytestring, iterable >=1.0 + ghc-options: -fspec-constr-count=4 -O3 -threaded -rtsopts -with-rtsopts=-N + Build-depends: base>=4.0, base <4.9, ghc-prim, directory, mtl, template-haskell, vector, AC-Vector, containers, deepseq,QuickCheck >= 2.5.0.0, text>=0.11.1.13, OpenGL, GLUT, hPDB >= 0.999, bytestring, iterable >=1.0 other-extensions: ScopedTypeVariables OverloadedStrings BangPatterns NoMonomorphismRestriction EmptyDataDecls MagicHash