fasta 0.10.0.0 → 0.10.1.0

raw patch · 2 files changed

+23/−2 lines, 2 filesPVP ok

version bump matches the API change (PVP)

API changes (from Hackage documentation)

Files

• fasta.cabal +3/−2
• src/Data/Fasta/Category.hs +20/−0

@@ -10,7 +10,7 @@ -- PVP summary:      +-+------- breaking API changes --                   | | +----- non-breaking API additions --                   | | | +--- code changes with no API change-version:             0.10.0.0+version:             0.10.1.0  -- A short (one-line) description of the package. synopsis:            A simple, mindless parser for fasta files.@@ -47,7 +47,8 @@  library   -- Modules exported by the library.-  exposed-modules:    Data.Fasta.String,+  exposed-modules:    Data.Fasta.Category,+                      Data.Fasta.String,                       Data.Fasta.String.Types,                       Data.Fasta.String.Parse,                       Data.Fasta.String.Translation,

@@ -0,0 +1,20 @@+-- Category Module+-- By Gregory W. Schwartz++{- | Collects all functions pertaining to the categorization of nucleotides+- or amino acids+-}++module Data.Fasta.Category where++-- Algebraic+data Hydrophobicity = Hydrophobic | Neutral | Hydrophilic+                      deriving (Eq, Ord, Read, Show)++-- | Returns the hydrophobicity of an amino acid+aaToHydrophobicity :: Char -> Either String Hydrophobicity+aaToHydrophobicity x+    | x `elem` "IVLFCMW" = Right Hydrophobic+    | x `elem` "AGTSYPH" = Right Neutral+    | x `elem` "NDQEKR"  = Right Hydrophilic+    | otherwise          = Left (x : " is not a valid amino acid")