diff --git a/ChangeLog.md b/ChangeLog.md
--- a/ChangeLog.md
+++ b/ChangeLog.md
@@ -5,9 +5,16 @@
## Unreleased changes
+## Version 0.7.0.1
+
+- Random 1.2: Parallel functions now require an \`IOGenM\` random number
+ generator.
+- Fix splitting of the random number generator.
+
+
## Version 0.6.1.1
-- Remove plotting functionality (gnuplot incompatible with ghc921).
+- Remove plotting functionality (gnuplot incompatible with ghc922).
- Read files strictly.
- Refactor; flatten model hierarchy.
diff --git a/README.md b/README.md
--- a/README.md
+++ b/README.md
@@ -2,7 +2,7 @@
# The ELynx Suite
-Version: 0.6.1.1.
+Version: 0.7.0.0.
Reproducible evolution made easy.
@@ -74,9 +74,9 @@
# OR: slynx --help
Up to date
- ELynx Suite version 0.6.1.1.
+ ELynx Suite version 0.7.0.0.
Developed by Dominik Schrempf.
- Compiled on February 22, 2022, at 15:10 pm, UTC.
+ Compiled on July 10, 2022, at 08:48 am, UTC.
Usage: slynx [-v|--verbosity VALUE] [-o|--output-file-basename NAME]
[-f|--force] [--no-elynx-file] COMMAND
@@ -144,16 +144,16 @@
# OR: slynx simulate --help
Up to date
- ELynx Suite version 0.6.1.1.
+ ELynx Suite version 0.7.0.0.
Developed by Dominik Schrempf.
- Compiled on February 22, 2022, at 15:10 pm, UTC.
+ Compiled on July 10, 2022, at 08:48 am, UTC.
Usage: slynx simulate (-t|--tree-file Name) [-s|--substitution-model MODEL]
[-m|--mixture-model MODEL] [-e|--edm-file NAME]
[-p|--siteprofile-files NAMES]
[-w|--mixture-model-weights "[DOUBLE,DOUBLE,...]"]
[-g|--gamma-rate-heterogeneity "(NCAT,SHAPE)"]
- (-l|--length NUMBER) [-S|--seed [INT]]
+ (-l|--length NUMBER) [-S|--seed INT]
Simulate multi sequence alignments.
Available options:
@@ -175,8 +175,7 @@
-g,--gamma-rate-heterogeneity "(NCAT,SHAPE)"
Number of gamma rate categories and shape parameter
-l,--length NUMBER Set alignment length to NUMBER
- -S,--seed [INT] Seed for random number generator; list of 32 bit
- integers with up to 256 elements (default: random)
+ -S,--seed INT Seed for random number generator (default: random)
-h,--help Show this help text
Substitution models:
diff --git a/elynx-nexus.cabal b/elynx-nexus.cabal
--- a/elynx-nexus.cabal
+++ b/elynx-nexus.cabal
@@ -1,6 +1,6 @@
cabal-version: 3.0
name: elynx-nexus
-version: 0.6.1.1
+version: 0.7.0.1
synopsis: Import and export Nexus files
description: Examine, modify, and simulate molecular sequences in a reproducible way. Please see the README on GitHub at .
category: Bioinformatics
@@ -8,7 +8,7 @@
bug-reports: https://github.com/dschrempf/elynx/issues
author: Dominik Schrempf
maintainer: dominik.schrempf@gmail.com
-copyright: Dominik Schrempf (2021)
+copyright: 2021 Dominik Schrempf
license: GPL-3.0-or-later
license-file: LICENSE
build-type: Simple
diff --git a/src/ELynx/Export/Nexus.hs b/src/ELynx/Export/Nexus.hs
--- a/src/ELynx/Export/Nexus.hs
+++ b/src/ELynx/Export/Nexus.hs
@@ -3,7 +3,7 @@
-- |
-- Module : ELynx.Export.Nexus
-- Description : Nexus types and classes
--- Copyright : (c) Dominik Schrempf 2021
+-- Copyright : 2021 Dominik Schrempf
-- License : GPL-3
--
-- Maintainer : dominik.schrempf@gmail.com
diff --git a/src/ELynx/Import/Nexus.hs b/src/ELynx/Import/Nexus.hs
--- a/src/ELynx/Import/Nexus.hs
+++ b/src/ELynx/Import/Nexus.hs
@@ -3,7 +3,7 @@
-- |
-- Module : ELynx.Import.Nexus
-- Description : Nexus types and classes
--- Copyright : (c) Dominik Schrempf 2021
+-- Copyright : 2021 Dominik Schrempf
-- License : GPL-3
--
-- Maintainer : dominik.schrempf@gmail.com