diversity 0.7.0.1 → 0.7.0.3

raw patch · 1 files changed

+26/−7 lines, 1 filesdep ~MonadRandomdep ~basedep ~containersPVP ok

version bump matches the API change (PVP)

Dependency ranges changed: MonadRandom, base, containers, data-ordlist, fasta, math-functions, optparse-applicative, parsec, pipes, random-shuffle, scientific, split

API changes (from Hackage documentation)

Files

• diversity.cabal +26/−7

@@ -2,9 +2,9 @@ -- documentation, see http://haskell.org/cabal/users-guide/  name:                diversity-version:             0.7.0.1-synopsis:            Return the diversity at each position for all sequences in a fasta file-description:         Find the diversity of a collection of entities, mainly for use with fasta sequences. Produces a binary which works on fasta files to find the diversity of any order and rarefaction curves for a sliding window across all positions in the sequences. To analyze just a collection of entities, just use the whole sequences and list flag.+version:             0.7.0.3+synopsis:            Return the diversity at each position by default for all sequences in a fasta file+description:         Find the diversity of a collection of entities, mainly for use with fasta sequences. homepage:            https://github.com/GregorySchwartz/diversity license:             GPL-2 license-file:        LICENSE@@ -18,14 +18,33 @@ library   -- ghc-options: -O2   hs-source-dirs:      src/src-lib-  exposed-modules:     Math.Diversity.Types, Math.Diversity.Diversity, Math.Diversity.GenerateDiversity, Math.Diversity.Print, Math.Diversity.Statistics, Math.Diversity.RandomSampling+  exposed-modules:     Math.Diversity.Types+                     , Math.Diversity.Diversity+                     , Math.Diversity.GenerateDiversity+                     , Math.Diversity.Print+                     , Math.Diversity.Statistics+                     , Math.Diversity.RandomSampling   -- other-modules:-  build-depends:       base >=4.6 && <4.9, containers >=0.5 && <0.6, split >=0.2 && <0.3, parsec >=3.1 && <4.0, fasta >=0.8 && <0.9, math-functions >=0.1 && <0.2, scientific >= 0.3 && < 0.4, random-shuffle >=0.0 && < 0.1, MonadRandom >=0.3 && <0.4, data-ordlist >= 0.4 && < 0.5+  build-depends:       base >=4.6 && <5+                     , containers >=0.5+                     , split >=0.2+                     , parsec >=3.1+                     , fasta >=0.8+                     , math-functions >=0.1+                     , scientific >= 0.3+                     , random-shuffle+                     , MonadRandom >=0.3+                     , data-ordlist >= 0.4  executable diversity   ghc-options: -O2   -- Directories containing source files.   hs-source-dirs:      src/src-exec   main-is:             Main.hs-  -- other-modules:       -  build-depends:       diversity, base >=4.6 && <4.9, optparse-applicative >=0.10 && <0.12, fasta >=0.8 && <0.9, pipes >= 4.1 && < 4.2, containers >=0.5 && <0.6+  -- other-modules:+  build-depends:       diversity+                     , base >=4.6 && <5+                     , optparse-applicative >=0.10+                     , fasta >=0.8+                     , pipes >= 4.1+                     , containers >=0.5