GrammarProducts (empty) → 0.0.0.2
raw patch · 16 files changed
+2107/−0 lines, 16 filesdep +ADPfusiondep +FormalGrammarsdep +HaTeXsetup-changed
Dependencies added: ADPfusion, FormalGrammars, HaTeX, PrimitiveArray, ansi-wl-pprint, base, bytestring, cmdargs, containers, data-default, lens, newtype, parsers, semigroups, transformers, trifecta
Files
- FormalLanguage/GrammarProduct.hs +67/−0
- FormalLanguage/GrammarProduct/Op/Add.hs +60/−0
- FormalLanguage/GrammarProduct/Op/Chomsky.hs +157/−0
- FormalLanguage/GrammarProduct/Op/Chomsky/Proof.hs +76/−0
- FormalLanguage/GrammarProduct/Op/Common.hs +37/−0
- FormalLanguage/GrammarProduct/Op/Greibach.hs +135/−0
- FormalLanguage/GrammarProduct/Op/Greibach/Proof.hs +161/−0
- FormalLanguage/GrammarProduct/Op/Linear.hs +73/−0
- FormalLanguage/GrammarProduct/Op/Power.hs +27/−0
- FormalLanguage/GrammarProduct/Op/Subtract.hs +34/−0
- FormalLanguage/GrammarProduct/Parser.hs +355/−0
- GramProd.hs +130/−0
- GrammarProducts.cabal +116/−0
- LICENSE +675/−0
- Setup.hs +2/−0
- changelog +2/−0
+ FormalLanguage/GrammarProduct.hs view
@@ -0,0 +1,67 @@++-- | This module contains the top-level functionality required to define+-- "products of grammars" (or more sloppily "how to multiply dynamic+-- programming algorithms"). Some operators (like '(><)') will check if both+-- grammars are compatible with the operation and fail if not.+--+-- TODO Later on we probably will be able to multiply without restrictions.++module FormalLanguage.GrammarProduct+ ( (><)+ , gAdd+ , gSubtract+ , gPower+ ) where++import Data.Monoid++import FormalLanguage.CFG.Grammar++import FormalLanguage.GrammarProduct.Op.Greibach as Greibach+import FormalLanguage.GrammarProduct.Op.Chomsky as Chomsky+import FormalLanguage.GrammarProduct.Op.Linear as Linear+import FormalLanguage.GrammarProduct.Op.Add+import FormalLanguage.GrammarProduct.Op.Subtract as S+import FormalLanguage.GrammarProduct.Op.Power as P++++-- |++gAdd g h = runAdd $ (Add g) <> (Add h)++gSubtract g h = S.subtract g h++gPower = P.power++++-- | The product of two grammars.+--+-- In general, it is quite hard to define the product of two context-free+-- grammars in a way that keeps associativity and also "does what we want it to+-- do" (see paper). For linear grammars it is much easier. Also, for grammars+-- in certain normal forms, a simpler definition is possible. Due to this, we+-- make the choice of the actual way on how to multiply based on the type of+-- grammars given. This, however, should only affect the resulting rules, not+-- the (multi-tape) language that the operations yields.+--+-- TODO I think, left-linear could reasonably be expanded to both, left- and+-- right-linear and maybe linear in general.+--+-- NOTE A proof for associativity is possible, but generally hard, so we prefer+-- to let the framework perform the proof for us.++(><) :: Grammar -> Grammar -> Grammar+g >< h+ | isLeftLinear g && isLeftLinear h = runLinear $ Linear g <> Linear h+-- | isChomskyNF g && isChomskyNF h = runCNF $ CNF g <> CNF h+-- | isGreibachNF g && isGreibachNF h = runTwoGNF $ TwoGNF g <> TwoGNF h+ | otherwise = error "Grammars in general CFG form are not handled. You need to convert into either Greibach- or Chomsky normal form. This might change in the future"++-- | The addition operation defined for two grammars of the same dimension. It+-- forms a monoid under the 'Add' newtype.++(.+) :: Grammar -> Grammar -> Grammar+g .+ h = runAdd $ Add g <> Add h+
+ FormalLanguage/GrammarProduct/Op/Add.hs view
@@ -0,0 +1,60 @@+{-# LANGUAGE FlexibleInstances #-}++module FormalLanguage.GrammarProduct.Op.Add where++import Control.Lens+import Control.Lens.Fold+import Control.Newtype+import Data.List (genericReplicate)+import Data.Monoid hiding ((<>))+import Data.Semigroup+import qualified Data.Set as S+import Text.Printf++import FormalLanguage.CFG.Grammar++++-- | Add two grammars. Implemented as the union of production rules without any+-- renaming.++newtype Add a = Add {runAdd :: a}++++-- | Note that the semigroup on Add will create a new rule S_gh -> S_g | S_h in+-- case two start symbols with different rhs exist (If S_g, S_h are the same,+-- there is no problem).++instance Semigroup (Add Grammar) where+ (Add l) <> (Add r)+ | gDim l /= gDim r+ = error $ printf "ERROR: grammars \n%s\n and \n%s\n have different dimensions, cannot unify. (add %d %d)"+ (show l)+ (show r)+ (gDim l)+ (gDim r)+ | otherwise = Add $ Grammar (l^.tsyms <> r^.tsyms)+ (l^.nsyms <> r^.nsyms) -- TODO add the newly created symbol to the non-terminals (or maybe just run ``fix T+N 's from the rules?'')+ (l^.epsis <> r^.epsis)+ (l^.rules <> r^.rules <> t)+ s+ (l^.name <> r^.name)+ where s = case (l^.start,r^.start) of+ (Nothing, Nothing) -> Nothing+ (Nothing, Just k ) -> Just k+ (Just k , Nothing) -> Just k+ (Just k , Just l ) -> if k==l then Just k else error "need to create new symbol, see note on Semigroup (Add Grammar)"+ t = case (l^.start,r^.start) of+ (Just k , Just l ) -> if k==l then S.empty else error "this will create the new rule"+ _ -> S.empty+ --(if l^.start == r^.start+ -- then l^.start+ -- else error "maybe add another rule and a unique start symbol?")++instance Monoid (Add Grammar) where+ mempty = Add $ Grammar S.empty S.empty S.empty S.empty Nothing ""+ mappend = (<>)++-- idempotency is not made explicit here+
+ FormalLanguage/GrammarProduct/Op/Chomsky.hs view
@@ -0,0 +1,157 @@+{-# LANGUAGE UnicodeSyntax #-}+{-# LANGUAGE LambdaCase #-}+{-# LANGUAGE PatternGuards #-}++module FormalLanguage.GrammarProduct.Op.Chomsky where++import Control.Applicative+import Control.Lens+import Control.Lens.Fold+import Control.Newtype ()+import Data.Function (on)+import Data.List (genericReplicate,replicate,groupBy)+import Data.Maybe+import Data.Monoid hiding ((<>))+import Data.Semigroup+import qualified Data.Set as S+import Text.Printf+import System.IO.Unsafe++import FormalLanguage.CFG.Grammar+import FormalLanguage.CFG.Parser+import FormalLanguage.CFG.PrettyPrint.ANSI++import FormalLanguage.GrammarProduct.Op.Common++++newtype CNF = CNF { runCNF :: Grammar }++instance Semigroup CNF where+ (CNF g) <> (CNF h) = CNF $ Grammar ts ns es rs s (g^.name ++ h^.name) where+ ts = S.fromList $ g^..tsyms.folded ++ h^..tsyms.folded+ ns = collectNonTerminals rs -- this is needed since we generate completely new non-terminal symbols+ es = S.fromList $ g^..epsis.folded ++ h^..epsis.folded+ rs = S.fromList+ . concat+ $ [ chomskyCombine l r | l <- g^..rules.folded, r <- h^..rules.folded ]+ s = liftA2 (\l r -> Symb $ l^.symb ++ r^.symb) (g^.start) (h^.start)++instance Monoid CNF where+ mempty = CNF $ Grammar S.empty S.empty S.empty (S.singleton undefined) (Just $ Symb []) ""+ mappend = (<>)++-- | Combine production rules a la Chomsky normal form.+--+-- TODO We need to be able to generate fresh rule name, as we are splitting+-- rules here! (this means that we need to lift this stuff into a+-- name-generating monad)++chomskyCombine :: Rule -> Rule -> [Rule]+chomskyCombine (Rule l f rs) (Rule a g bs)+ | [r] <- rs, [b] <- bs, isSymbT r, isSymbT b+ = [Rule (Symb $ l^.symb ++ a^.symb) [] {- (f++g) -} [Symb $ r^.symb ++ b^.symb]]+ | [r1,r2] <- rs, [b1,b2] <- bs, isSymbN r1, isSymbN r2, isSymbN b1, isSymbN b2+ = [Rule (Symb $ l^.symb ++ a^.symb) [] {- (f++g) -} [Symb $ r1^.symb ++ b1^.symb, Symb $ r2^.symb ++ b2^.symb]]+ | [r] <- rs, [b1,b2] <- bs, isSymbT r, isSymbN b1, isSymbN b2+ = let (z1,zs1) = symbToRules r b1+ (z2,zs2) = symbToRules r b2+ in zs1 ++ zs2 ++ {-concatMap (extendRederive (length $ l^.symb) (length $ a^.symb))-}+ [ Rule (Symb $ l^.symb ++ a^.symb) [] {- (f++g) -} [ {- Symb $ r^.symb ++ b1^.symb -} z1 , Symb $ genEps r ++ b2^.symb]+ , Rule (Symb $ l^.symb ++ a^.symb) [] {- (f++g) -} [Symb $ genEps r ++ b1^.symb, z2 {- Symb $ r^.symb ++ b2^.symb -} ]+ ]+ | [r1,r2] <- rs, [b] <- bs, isSymbN r1, isSymbN r2, isSymbT b+ = let (z1,zs1) = symbToRules r1 b+ (z2,zs2) = symbToRules r2 b+ in zs1 ++ zs2 ++ {-concatMap (extendRederive (length $ l^.symb) (length $ a^.symb))-}+ [ Rule (Symb $ l^.symb ++ a^.symb) [] {- (f++g) -} [{- Symb $ r1^.symb ++ b^.symb -} z1 , Symb $ r2^.symb ++ genEps b]+ , Rule (Symb $ l^.symb ++ a^.symb) [] {- (f++g) -} [Symb $ r1^.symb ++ genEps b, z2 {- Symb $ r2^.symb ++ b^.symb -} ]+ ]+ --+ -- extended Chomsky: Non-terminal -> Non-terminal+ --+ {-+ | [r] <- rs, [b] <- bs, nSymb r, nSymb b+ = [ Rule (Symb $ l^.symb ++ a^.symb) [] [ Symb $ r^.symb ++ b^.symb ] ]+ | [r] <- rs, [b1,b2] <- bs, nSymb r, nSymb b1, nSymb b2+ = []+ | [r1,r2] <- rs, [b] <- bs, nSymb r1, nSymb r2, nSymb b+ = []+ | [r] <- rs, [b] <- bs+ = []+ -}+ {-+ = [ Rule (Symb $ l^.symb ++ a^.symb) [] [ Symb $ r^.symb ++ b1^.symb, Symb $ genEps r ++ b2^.symb ]+ , Rule (Symb $ l^.symb ++ a^.symb) [] [ Symb $ genEps r ++ b1^.symb, Symb $ r^.symb ++ b2^.symb ]+ ]+ -}+ --+ -- extended Chomsky above+ --+ | otherwise = unsafePerformIO $ do+ print "======"+ printDoc $ rulesDoc $ S.singleton $ Rule l f rs+ printDoc $ rulesDoc $ S.singleton $ Rule a g bs+ fail "cannot handle (rule is not CNF):"+ -- | otherwise = error $ "cannot handle (rule is not CNF): " ++ show (printDoc $ rulesDoc $ S.singleton $ Rule l f rs, Rule a g bs)++{-+-- | Extend mixed rules and rederive CNF++extendRederive :: Int -> Int -> Rule -> [Rule]+extendRederive α β (Rule l f [r1,r2])+ | not (tSymb r1) && not (nSymb r1) && nSymb r2+ = let (newN,epsN,trmN,epsT) = genNewSymbols α β r1+ in [ Rule l f [newN,r2]+ , Rule newN ( {- "nwNL_": -} f) [epsN,trmN]+ , Rule newN ( {- "nwNR_": -} f) [trmN,epsN]+ , Rule trmN ( {- "trmN_": -} f) [epsT]+ ]+ | nSymb r1 && not (tSymb r2) && not (nSymb r2)+ = let (newN,epsN,trmN,epsT) = genNewSymbols α β r2+ in [ Rule l f [r1,newN]+ , Rule newN ( {- "nwNL_": -} f) [epsN,trmN]+ , Rule newN ( {- "nwNR_": -} f) [trmN,epsN]+ , Rule trmN ( {- "trmN_": -} f) [epsT]+ ]+extendRederive _ _ r = error $ "cannot handle (rule not in extendRederive form for CNF): " ++ show r++genNewSymbols :: Int -> Int -> Symb -> (Symb,Symb,Symb,Symb)+genNewSymbols α β x = (newN, epsN, trmN, epsT) where+ -- the new non-terminal, with term TN's replaced by non-term TN with same name (plus extension)+ newN = Symb . map (\case (T s) -> N ("N"++s) Singular ; z -> z) $ x^.symb+ -- the new non-terminal, with terms replaced by epsilons+ epsN = Symb . map (\case (T s) -> eps ; z -> z) $ x^.symb+ -- the new non-terminal for the terminal symbol, with terms replaced by non-term symbols+ -- TODO we can't just replace all N here with eps, tome could have been created from other prods.+ trmN = Symb . map (\case (T s) -> N ("T"++s) Singular ; N _ _ -> eps; z -> z) $ x^.symb+ -- finally the terminal + epsT = Symb . map (\case (N _ _) -> eps ; z -> z) $ x^.symb+-}++-- | ++symbToRules :: Symb -> Symb -> (Symb, [Rule])+symbToRules u' l'+ | isSymbN u' && isSymbT l' = go u' l'+ | isSymbT u' && isSymbN l' = let (s,rs) = go (over symb reverse l') (over symb reverse u')+ in ( over symb reverse s+ , map (\(Rule l [] rs) -> Rule (over symb reverse l) [] (map (over symb reverse) rs)) rs+ )+ | otherwise = error $ "incompatible upper/lower: " ++ show (u',l')+ where+ -- in 'n' we have the partial non-terminal, in 't' the partial terminal+ go n t =+ let t' = Symb $ map (\case (T s) -> (N ("T"++s) Singular) ; z -> z) $ t^.symb+ in ( Symb $ n^.symb ++ t'^.symb+ , [ Rule (Symb $ n^.symb ++ t'^.symb) [] [ Symb $ n^.symb ++ genEps t, Symb $ genEps n ++ genTermStar t ]+ , Rule (Symb $ n^.symb ++ t'^.symb) [] [ Symb $ genEps n ++ genTermStar t, Symb $ n^.symb ++ genEps t ]+ , Rule (Symb $ genEps n ++ genTermStar t) [] [ Symb $ genEps n ++ t^.symb ]+ ]+ )++-- | Generate a certain number of epsilons++genTermStar :: Symb -> [TN]+genTermStar s = map (\case (T s) -> N ("S"++s) Singular ; z -> z) $ s^.symb+
+ FormalLanguage/GrammarProduct/Op/Chomsky/Proof.hs view
@@ -0,0 +1,76 @@++module FormalLanguage.GrammarProduct.Op.Chomsky.Proof where++import Control.Lens+import Control.Lens.Fold+import Control.Newtype ()+import Data.List (genericReplicate)+import Data.Monoid hiding ((<>))+import Data.Semigroup+import qualified Data.Set as S+import Text.Printf+import Data.List (groupBy)+import Data.Function (on)+import Data.Maybe+import Control.Applicative++import Text.PrettyPrint.ANSI.Leijen hiding ((<>))+import Text.Trifecta --+import qualified Data.ByteString.Char8 as B+import Control.Monad.Trans.State.Strict+import Data.Default+import Text.Trifecta.Delta++import FormalLanguage.CFG.Grammar+import FormalLanguage.CFG.PrettyPrint.ANSI+import FormalLanguage.CFG.PrettyPrint.LaTeX+import FormalLanguage.CFG.Parser++import FormalLanguage.GrammarProduct.Op.Chomsky++++-- * Proof of associativity of the 2-GNF.++-- | Run the 2-gnf grammar with the TwoGNF monoid which observes the 2 star+-- cases.++cNFassociativity :: (Grammar, Grammar, S.Set Rule, S.Set Rule, Bool)+cNFassociativity = ( l+ , r+ , (l^.rules) S.\\ (r^.rules)+ , (r^.rules) S.\\ (l^.rules)+ , l^.rules == r^.rules) where+ l = runCNF $ (CNF g <> CNF g) <> CNF g+ r = runCNF $ CNF g <> (CNF g <> CNF g)+ g = cNFgrammar++cNFs = g where+ g = runCNF $ (CNF h <> CNF h)+ h = cNFgrammar++showTwo = printDoc $ grammarDoc $ runCNF $ CNF cNFgrammar <> CNF cNFgrammar++-- * The simple 2-gnf grammar to run the proof on.++-- | Very simple 2-gnf form for proofs.++cNFgrammar = case g of+ Success g' -> g'+ Failure f -> error $ show f+ where+ g = parseGrammar "testGrammar" twoGNF+ twoGNF = unlines+ [ "Grammar: CNF"+ , "N: A"+ , "N: B"+ , "N: C"+-- , "N: Sa"+ , "T: a"+ , "A -> twoN <<< B C"+ , "A -> oneT <<< a"+-- , "A -> oneN <<< Sa"+-- , "Sa -> oneT <<< a"+ , "//"+ ]+
+ FormalLanguage/GrammarProduct/Op/Common.hs view
@@ -0,0 +1,37 @@+{-# LANGUAGE LambdaCase #-}++module FormalLanguage.GrammarProduct.Op.Common where++import qualified Data.Set as S+import Control.Lens++import FormalLanguage.CFG.Grammar++++-- | Collect all terminal symbols from a set of rules.+--+-- TODO move to FormalGrammars library+--+-- TODO i guess, this collects multidim stuff for now!!!++collectTerminals :: S.Set Rule -> S.Set Symb+collectTerminals = S.fromList . filter isSymbT . concatMap _rhs . S.toList++-- | Collect all non-terminal symbols from a set of rules.+--+-- TODO move to FormalGrammars library++collectNonTerminals :: S.Set Rule -> S.Set Symb+collectNonTerminals = S.fromList . filter isSymbN . concatMap (\r -> r^.lhs : r^.rhs) . S.toList++collectEpsilons :: S.Set Rule -> S.Set TN+collectEpsilons = S.fromList+ . filter (\case E -> True ; z -> False)+ . concatMap (view symb)+ . concatMap _rhs+ . S.toList++genEps :: Symb -> [TN]+genEps s = replicate (length $ s^.symb) E+
+ FormalLanguage/GrammarProduct/Op/Greibach.hs view
@@ -0,0 +1,135 @@+{-# LANGUAGE ParallelListComp #-}++module FormalLanguage.GrammarProduct.Op.Greibach where++import Control.Applicative+import Control.Lens+import Control.Lens.Fold+import Control.Newtype ()+import Data.Function (on)+import Data.List (genericReplicate)+import Data.List (groupBy)+import Data.Maybe+import Data.Monoid hiding ((<>))+import Data.Semigroup+import qualified Data.Set as S+import Text.Printf++import Text.Trifecta --+import qualified Data.ByteString.Char8 as B+import Control.Monad.Trans.State.Strict+import Data.Default+import Text.Trifecta.Delta++import FormalLanguage.CFG.Grammar+import FormalLanguage.CFG.Parser++import FormalLanguage.GrammarProduct.Op.Common++++-- * Proof of associativity of the 2-GNF.++-- | Wrap a grammar in 2-GNF form.+--+-- The 2-GNF has rules of the form: X -> a | aY | aYZ with "a" terminal, "Y",+-- "Z" non-terminals.++newtype TwoGNF = TwoGNF {runTwoGNF :: Grammar}++-- | Construct a grammar product for a grammar in 2-GNF form.+--+-- TODO check if grammar is in 2-GNF!++instance Semigroup TwoGNF where+ (TwoGNF g) <> (TwoGNF h) = TwoGNF $ Grammar ts ns es rs s (g^.name ++ h^.name) where+ ts = collectTerminals rs+ ns = collectNonTerminals rs+ es = g^.epsis <> h^.epsis -- this is kind of sketchy+ rs = S.fromList+ . map starRemove+ . catMaybes+ $ [ l <.> r+ | l <- concatMap (starExtend $ gDim g) . S.toList $ g^.rules+ , r <- concatMap (starExtend $ gDim h) . S.toList $ h^.rules+ ]+ s = liftA2 (\l r -> Symb $ l^.symb ++ r^.symb) (g^.start) (h^.start)+ (<.>) :: Rule -> Rule -> Maybe Rule+ a <.> b | ((Just $ a^.lhs)==g^.start) `exactlyOne` ((Just $ b^.lhs)==h^.start) = Nothing+ a <.> b = Just+ $ Rule (Symb $ a^.lhs.symb ++ b^.lhs.symb)+ [""]+ (zipWith (\x y -> Symb $ x^.symb ++ y^.symb) (a^.rhs) (b^.rhs))+ exactlyOne False True = True+ exactlyOne True False = True+ exactlyOne _ _ = False+ -- | Extend a rule with ``epsilon-type'' productions to create 2-GNF for all rules+ starExtend :: Int -> Rule -> [Rule]+ starExtend k (Rule l f [t]) = [ Rule l f [t,stars k, stars k]]+ starExtend k (Rule l f [t,n]) = [ Rule l f [t,n,stars k]+ , Rule l f [t,stars k,n]+ ]+ -- assuming that we have a 2-gnf at most+ starExtend k r = [r]+ stars :: Int -> Symb+ stars k = Symb $ replicate k E+ -- | Remove star-online columns.+ starRemove :: Rule -> Rule+ starRemove = over rhs (filter (any (not . isEpsilon) . getSymbs))+ isEpsilon E = True+ isEpsilon _ = False++-- | The start symbol for this instance needs to be "Just []" so as to preserve+-- the start symbol in a chain of (<>) operations.++instance Monoid TwoGNF where+ mempty = TwoGNF $ Grammar S.empty S.empty S.empty (S.singleton undefined) (Just $ Symb []) ""+ mappend = (<>)++++-- | Takes lists of symbols and aligns according to being+-- terminal/non-terminal:+--+-- aXbc / aXYb =>+--+-- aX-bc a-Xbc+-- aXYb- aXYb-+--+-- That is, create all alignments of non-terminals, but just ``left-align'' all+-- terminals. This will create all possible "alignments" of symbols. This is+-- why we return a list of lists.++{-+aligned :: [Symb] -> [Symb] -> [[Symb]]+aligned ls' rs' = go (groupBy ((==) `on` isSymbT) ls') (groupBy ((==) `on` isSymbT) rs') where+ dl = length . getSymbs . head $ ls'+ dr = length . getSymbs . head $ rs'+ go :: [[Symb]] -> [[Symb]] -> [[Symb]]+ go [] [] = []+ go (l:ls) [] = epsR l : go ls []+ go [] (r:rs) = epsL r : go [] rs+ go (l:ls) (r:rs)+ | all isSymbT l+ && all isSymbT r = goT l r : go ls rs+ | all isSymbN l+ && all isSymbN r = undefined -- [ ns : gs | ns <- goN l r, gs <- go ls rs ]+ | all isSymbT l = epsR l : go ls (r:rs)+ | all isSymbT r = epsL r : go (l:ls) rs+ goT [] [] = []+ goT ls [] = epsR ls+ goT [] rs = epsL rs+ goT (l:ls) (r:rs) = (Symb $ l^.symb ++ r^.symb) : goT ls rs+ goN :: [Symb] -> [Symb] -> [[Symb]]+ goN [] [] = [[]]+ goN (l:ls) [] = epsR [l] : goN ls []+ goN [] (r:rs) = epsL [r] : goN [] rs+ goN lls rrs+ | length lls == length rrs = [[ Symb $ l^.symb ++ r^.symb | l <- lls | r <- rrs ]]+ goN lls@(l:ls) rrs@(r:rs)+ | length lls < length rrs = undefined+ | length lls > length rrs = undefined+ epsR ls = map (\(Symb s) -> Symb $ s ++ replicate dr (T "")) ls+ epsL rs = map (\(Symb s) -> Symb $ replicate dl (T "") ++ s) rs+-}+
+ FormalLanguage/GrammarProduct/Op/Greibach/Proof.hs view
@@ -0,0 +1,161 @@+{-# LANGUAGE PatternGuards #-}+{-# LANGUAGE ParallelListComp #-}++module FormalLanguage.GrammarProduct.Op.Greibach.Proof where++import Control.Lens+import Control.Lens.Fold+import Control.Newtype ()+import Data.List (genericReplicate)+import Data.Monoid hiding ((<>))+import Data.Semigroup+import qualified Data.Set as S+import Text.Printf+import Data.List (groupBy)+import Data.Function (on)+import Data.Maybe+import Control.Applicative++import Text.PrettyPrint.ANSI.Leijen hiding ((<>))+import Text.Trifecta --+import qualified Data.ByteString.Char8 as B+import Control.Monad.Trans.State.Strict+import Data.Default+import Text.Trifecta.Delta++import FormalLanguage.CFG.Grammar+import FormalLanguage.CFG.PrettyPrint.ANSI+import FormalLanguage.CFG.PrettyPrint.LaTeX+import FormalLanguage.CFG.Parser++import FormalLanguage.GrammarProduct.Op.Greibach+import FormalLanguage.GrammarProduct.Op.Common++++-- * Proof of associativity of the 2-GNF.++-- | Run the 2-gnf grammar with the TwoGNF monoid which observes the 2 star+-- cases.++twoGNFassociativity :: (Grammar, Grammar, S.Set Rule, S.Set Rule, Bool)+twoGNFassociativity = ( l+ , r+ , (l^.rules) S.\\ (r^.rules)+ , (r^.rules) S.\\ (l^.rules)+ , l^.rules == r^.rules) where+ l = runTwoGNF $ (TwoGNF g <> TwoGNF g) <> TwoGNF g+ r = runTwoGNF $ TwoGNF g <> (TwoGNF g <> TwoGNF g)+ g = twoGNFgrammar++twoGNFs = g where+ g = runTwoGNF $ (TwoGNF h <> TwoGNF h)+ h = twoGNFgrammar++assocHelper l r = ( l+ , r+ , (l^.rules) S.\\ (r^.rules)+ , (r^.rules) S.\\ (l^.rules)+ , l^.rules == r^.rules)++-- * Proof that the 2 star cases are actually needed. We loose associativity+-- without those. As this version does not preserve associativity, we keep it+-- here, instead of the general Greibach version.++newtype FailGNF = FailGNF { runFailGNF :: Grammar }++-- |+--+-- TODO check correctness++instance Semigroup FailGNF where+ (FailGNF g) <> (FailGNF h) = FailGNF $ Grammar ts ns es rs s (g^.name ++ h^.name) where+ ts = collectTerminals rs+ ns = collectNonTerminals rs+ es = g^.epsis <> h^.epsis+ rs = S.fromList+ . map starRemove+ . concat+ $ [ l <.> r+ | l <- S.toList $ g^.rules+ , r <- S.toList $ h^.rules+ ]+ s = liftA2 (\l r -> Symb $ l^.symb ++ r^.symb) (g^.start) (h^.start)+ (<.>) :: Rule -> Rule -> [Rule]+ a <.> b | ((Just $ a^.lhs)==g^.start) `exactlyOne` ((Just $ b^.lhs)==h^.start) = []+ a <.> b+ | [s,m] <- a^.rhs+ , [t,n,o] <- b^.rhs+ = [ Rule (Symb $ a^.lhs.symb ++ b^.lhs.symb)+ [""]+ [Symb $ s^.symb ++ t^.symb, Symb $ m^.symb ++ n^.symb, Symb $ stars (length $ m^.symb) ^.symb ++ o^.symb ]+ , Rule (Symb $ a^.lhs.symb ++ b^.lhs.symb)+ [""]+ [Symb $ s^.symb ++ t^.symb, Symb $ stars (length $ m^.symb) ^.symb ++ n^.symb, Symb $ m^.symb ++ o^.symb ]+ ]+ | [s,m,o] <- a^.rhs+ , [t,n] <- b^.rhs+ = [ Rule (Symb $ a^.lhs.symb ++ b^.lhs.symb)+ [""]+ [ Symb $ s^.symb ++ t^.symb+ , Symb $ m^.symb ++ n^.symb+ , Symb $ o^.symb ++ stars (length $ t^.symb) ^.symb+ ]+ , Rule (Symb $ a^.lhs.symb ++ b^.lhs.symb)+ [""]+ [ Symb $ s^.symb ++ t^.symb+ , Symb $ m^.symb ++ stars (length $ t^.symb) ^.symb+ , Symb $ o^.symb ++ n^.symb+ ]+ ]+ a <.> b = [ Rule (Symb $ a^.lhs.symb ++ b^.lhs.symb)+ [""]+ (take 3 $ zipWith (\l r -> Symb $ l^.symb ++ r^.symb) (a^.rhs ++ repeat (stars (gDim g)))+ (b^.rhs ++ repeat (stars (gDim h)))+ )+ ]+ exactlyOne False True = True+ exactlyOne True False = True+ exactlyOne _ _ = False+ stars :: Int -> Symb+ stars k = Symb $ replicate k E+ -- | Remove star-online columns.+ starRemove :: Rule -> Rule+ starRemove = over rhs (filter (any (not . isEpsilon) . getSymbs))+ isEpsilon E = True+ isEpsilon _ = False+++-- | Run the 2-gnf grammar without the star cases.++-- noStarFailure :: (S.Set Rule, S.Set Rule, +noStarFailure = assocHelper l r where+ l = runFailGNF $ (FailGNF g <> FailGNF g) <> FailGNF g+ r = runFailGNF $ FailGNF g <> (FailGNF g <> FailGNF g)+ g = twoGNFgrammar++-- * The simple 2-gnf grammar to run the proof on.++-- | Very simple 2-gnf form for proofs.++twoGNFgrammar = case g of+ Success g' -> g'+ Failure f -> error $ show f+ where+ g = parseGrammar "testGrammar" twoGNF+ twoGNF = unlines+ [ "Grammar: TwoGNF"+ , "N: A"+ , "N: B"+ , "N: C"+ , "N: D"+ , "T: a"+ , "T: b"+ , "T: c"+-- , "S: X"+ , "A -> three <<< a B C"+ , "A -> two <<< b D"+ , "A -> one <<< c"+ , "//"+ ]+
+ FormalLanguage/GrammarProduct/Op/Linear.hs view
@@ -0,0 +1,73 @@+{-# LANGUAGE FlexibleInstances #-}++-- | Direct product of two grammars.+--+-- Currently implemented for linear grammars. Once we move to context-free+-- grammars with more than one non-terminal on the RHS, things become+-- interesting.++module FormalLanguage.GrammarProduct.Op.Linear where++import Data.Semigroup+import Control.Lens+import Control.Applicative+import qualified Data.Set as S+import Data.List (groupBy)+import Data.Function (on)++import FormalLanguage.CFG.Grammar++import FormalLanguage.GrammarProduct.Op.Common++++newtype Linear a = Linear {runLinear :: a}++++instance Semigroup (Linear Grammar) where+ (Linear g) <> (Linear h) = Linear $ Grammar ts ns es rs s (g^.name <> h^.name) where+ ts = g^.tsyms <> h^.tsyms+ ns = collectNonTerminals rs+ es = g^.epsis <> h^.epsis+ rs = S.fromList [ direct l r | l <- g^..rules.folded, r <- h^..rules.folded ]+ s = liftA2 (\l r -> Symb $ l^.symb ++ r^.symb) (g^.start) (h^.start)+ direct (Rule l f rs) (Rule a g bs) = Rule (Symb $ l^.symb ++ a^.symb) (f++g) (mergeRHS rs bs)++instance Monoid (Linear Grammar) where+ mempty = Linear $ Grammar S.empty S.empty S.empty (S.singleton $ Rule (Symb []) [] []) Nothing ""+ mappend = (<>)++-- | Merges right-hand sides in a linear direct product. For full-fledged CFGs+-- in different normal forms, see the GNF and CNF implementations.++mergeRHS :: [Symb] -> [Symb] -> [Symb]+mergeRHS [] rs = rs -- neutral element+mergeRHS ls [] = ls -- neutral element+mergeRHS ls' rs' = concat $ go (groupRHS ls') (groupRHS rs') where+ dl = head ls'+ dr = head rs'+ go [] [] = []+ go [] (r:rs)+ | all isSymbT r = map (\(Symb z) -> Symb $ genEps dl ++ z) r : go [] rs+ | all isSymbN r = let [Symb z] = r+ in [Symb $ genEps dl ++ z] : go [] rs+ go (l:ls) []+ | all isSymbT l = map (\(Symb z) -> Symb $ z ++ genEps dr) l : go ls []+ | all isSymbN l = let [Symb z] = l+ in [Symb $ z ++ genEps dr] : go ls []+ go (l:ls) (r:rs)+ | all isSymbT l && all isSymbT r = goT l r : go ls rs+ | all isSymbN l && all isSymbN r = let [Symb y] = l+ [Symb z] = r+ in [Symb $ y++z] : go ls rs+ | all isSymbN l = go [l] [] ++ go ls (r:rs)+ | all isSymbN r = go [] [r] ++ go (l:ls) rs+ | otherwise = go [l] [] ++ go [] [r] ++ go ls rs+ goT [] [] = []+ goT [] (Symb t : rs) = Symb (genEps dl ++ t) : goT [] rs+ goT (Symb t : ls) [] = Symb (t ++ genEps dr) : goT ls []+ goT (Symb u : ls) (Symb v : rs) = Symb (u++v) : goT ls rs++groupRHS = groupBy ((==) `on` isSymbT)+
+ FormalLanguage/GrammarProduct/Op/Power.hs view
@@ -0,0 +1,27 @@++module FormalLanguage.GrammarProduct.Op.Power where++import Control.Newtype+import Data.Semigroup+import Control.Lens+import Control.Lens.Fold+import qualified Data.Set as S+import Data.List (genericReplicate)+import Text.Printf++import FormalLanguage.CFG.Grammar++++-- |++power :: Grammar -> Integer -> Grammar+power g k = Grammar ts ns es rs s nm where+ ts = g^.tsyms+ ns = S.map go $ g^.nsyms+ es = g^.epsis+ rs = S.map (\(Rule l f rs) -> Rule (go l) (f++f) (map go rs)) $ g^.rules+ s = fmap go $ g^.start+ nm = concat . genericReplicate k $ g^.name+ go (Symb z) = Symb . concat $ genericReplicate k z+
+ FormalLanguage/GrammarProduct/Op/Subtract.hs view
@@ -0,0 +1,34 @@+{-# LANGUAGE FlexibleInstances #-}++module FormalLanguage.GrammarProduct.Op.Subtract where++import Control.Newtype+import Data.Semigroup+import Control.Lens+import Control.Lens.Fold+import qualified Data.Set as S+import Data.List (genericReplicate)+import Text.Printf++import FormalLanguage.CFG.Grammar++import FormalLanguage.GrammarProduct.Op.Common++++-- | Subtract two grammars.++subtract :: Grammar -> Grammar -> Grammar+subtract l r+ | gDim l /= gDim r = error $ printf "grammars %s and %s have different dimensions, cannot unify. (subtract)" (show l) (show r)+ | otherwise = Grammar ts ns es rs s (l^.name ++ r^.name) where+ ts = collectTerminals rs+ ns = collectNonTerminals rs+ es = collectEpsilons rs+ rs = (l^.rules) S.\\ (r^.rules)+ s = case (l^.start) of+ Nothing -> Nothing+ Just s' -> if anyOf (rules.folded.lhs) (==s') l+ then l^.start+ else Nothing+
+ FormalLanguage/GrammarProduct/Parser.hs view
@@ -0,0 +1,355 @@+{-# LANGUAGE ScopedTypeVariables #-}+{-# LANGUAGE StandaloneDeriving #-}+{-# LANGUAGE RankNTypes #-}+{-# LANGUAGE TemplateHaskell #-}+{-# LANGUAGE GeneralizedNewtypeDeriving #-}+{-# LANGUAGE NoMonomorphismRestriction #-}+{-# LANGUAGE OverloadedStrings #-}++-- | This parser extends the @FormalLanguage.Parser@ parser of single- and+-- multi-dim grammars to accept grammar product definitions as well.++module FormalLanguage.GrammarProduct.Parser where++import Control.Arrow+import Control.Applicative+import Control.Lens+import Control.Monad (MonadPlus(..), guard, when)+import Control.Monad.Trans.Class+import Control.Monad.Trans.State.Strict+import Control.Monad.Trans.Reader+import Data.Default+import Data.Either+import Data.Map (Map)+import Data.Set (Set)+import Debug.Trace+import Data.List+import qualified Data.ByteString.Char8 as B+--import qualified Data.HashSet as H+import qualified Data.Map as M+import qualified Data.Set as S+import Text.Parser.Expression+import Text.Parser.Token.Highlight+import Text.Parser.Token.Style+import Text.Printf+import Text.Trifecta+import Text.Trifecta.Delta+import Text.Trifecta.Result+import Data.Semigroup ((<>),times1p)+import qualified Control.Newtype as T+--import Numeric.Natural.Internal+import Prelude hiding (subtract)+import Control.Monad++import FormalLanguage.CFG.Grammar+import FormalLanguage.CFG.Parser++import FormalLanguage.GrammarProduct++++-- | Parse a product grammar.++parseProduct :: String -> String -> Result [Grammar]+parseProduct fname cnts = parseString+ ((evalStateT . runGrammarP) productParser def)+ (Directed (B.pack fname) 0 0 0 0)+ cnts++-- | Parse all grammars and grammar products, prepending to the list.++productParser = go [] <* eof where+ go gs = do+ whiteSpace+ g' <- option Nothing $ Just <$> (try grammar <|> grammarProduct gs)+ case g' of+ Nothing -> return gs+ Just g -> go (g:gs)++grammarProduct gs = do+ reserveGI "Product:"+ n <- identGI+ e <- getGrammar <$> expr (M.fromList [(g^.name,g) | g<-gs])+ reserveGI "//"+ return $ over (name) (const n) e++expr :: Map String Grammar -> Parse ExprGrammar+expr g = e where+ e = buildExpressionParser table term+ table = [ [ binary "^><" highDirect AssocLeft+ ]+ , [ binary "><" exprDirect AssocLeft+ , binary "*" exprPower AssocLeft+ ]+ , [ binary "+" exprPlus AssocLeft+ , binary "-" exprMinus AssocLeft+ ]+ ]+ term = parens e+ <|> (choice gts <?> "previously defined grammar")+ <|> (ExprNumber <$> natural <?> "integral power of grammar")+ gts = map (fmap ExprGrammar . gterm) $ M.assocs g+ binary n f a = Infix (f <$ reserveGI n) a+ exprDirect l r = ExprGrammar $ (getGrammar l >< getGrammar r)+ exprPlus l r = ExprGrammar $ gAdd (getGrammar l) (getGrammar r)+ exprMinus l r = ExprGrammar $ gSubtract (getGrammar l) (getGrammar r)+ exprPower l r = ExprGrammar $ gPower (getGrammar l) (getNumber r)+ highDirect l r = error "highDirect (not active)!" -- ExprGrammar . unDirect $ times1p (Natural $ getNumber r -1) (Direct $ getGrammar l)++data ExprGrammar+ = ExprGrammar { getGrammar :: Grammar }+ | ExprNumber { getNumber :: Integer }++gterm :: (String,Grammar) -> Parse Grammar+gterm (s,g) = g <$ reserveGI s++{-+data GS = GS+ { _ntsyms :: Map String Integer+ , _tsyms :: Set String+ , _gs :: Map String Grammar+ , _gCount :: Integer+ , _grammarUid :: Integer+ }+ deriving (Show)++instance Default GS where+ def = GS+ { _ntsyms = def+ , _tsyms = def+ , _gs = def+ , _gCount = def+ , _grammarUid = def+ }++makeLenses ''GS++-- | Parsing product expressions, producing a grammar, again++{-+expr :: Map String Grammar -> Parse Grammar+expr g = choice [directprod] where+ directprod = do+ gl <- choice gts+ reserve gi "><"+ gr <- choice gts+ return . unDirect $ Direct gl <> Direct gr+ gts = map gterm $ M.assocs g+-}++expr :: Map String Grammar -> Parse ExprGrammar+expr g = e where+ e = buildExpressionParser table term+ table = [ [ binary "^><" highDirect AssocLeft+ ]+ , [ binary "><" exprDirect AssocLeft+ , binary "*" exprPower AssocLeft+ ]+ , [ binary "+" exprPlus AssocLeft+ , binary "-" exprMinus AssocLeft+ ]+ ]+ term = parens e+ <|> (choice gts <?> "previously defined grammar")+ <|> (ExprNumber <$> natural <?> "integral power of grammar")+ gts = map (fmap ExprGrammar . gterm) $ M.assocs g+ binary n f a = Infix (f <$ reserve gi n) a+ exprDirect l r = ExprGrammar . unDirect $ (Direct $ getGrammar l) <> (Direct $ getGrammar r)+ exprPlus l r = ExprGrammar . unAdd $ (Add $ getGrammar l) <> (Add $ getGrammar r)+ exprMinus l r = ExprGrammar $ subtract (getGrammar l) (getGrammar r)+ exprPower l r = ExprGrammar $ power (getGrammar l) (getNumber r)+ highDirect l r = ExprGrammar . unDirect $ times1p (Natural $ getNumber r -1) (Direct $ getGrammar l)++data ExprGrammar+ = ExprGrammar { getGrammar :: Grammar }+ | ExprNumber { getNumber :: Integer }++gterm :: (String,Grammar) -> Parse Grammar+gterm (s,g) = g <$ reserve gi s++-- | Grammar product++gprod :: Parse Grammar+gprod = do+ reserve gi "Product:"+ n <- ident gi+ g <- use gs+ e <- getGrammar <$> expr g+ reserve gi "//"+ let g = e & gname .~ n+ gs <>= M.singleton (g ^. gname) g+ return g++data Product = Product+ deriving (Show)++-- |+--+-- TODO complain on indexed NTs with modulus '1'++grammar :: Parse Grammar+grammar = do+ -- reset some information+ ntsyms .= def+ tsyms .= def+ -- new grammar+ gCount += 1+ -- begin parsing+ reserve gi "Grammar:"+ n <- ident gi+ (nts,ts) <- partitionEithers <$> ntsts+ rs <- concat <$> some rule+ reserve gi "//"+ let g = Grammar (S.fromList rs) n+ gs <>= M.singleton (g ^. gname) g+ return g++-- | Parse a single rule. Some rules come attached with an index. In that case,+-- each rule is inflated according to its modulus.+--+-- TODO add @fun@ to each PR++rule :: Parse [PR]+rule = do+ ln <- ident gi <?> "rule: lhs non-terminal"+ uses ntsyms (M.member ln) >>= guard <?> (printf "undeclared NT: %s" ln)+ i <- nTindex+ reserve gi "->"+ fun <- ident gi+ reserve gi "<<<"+ zs <- runUnlined $ some (Left <$> try ruleNts <|> Right <$> try ruleTs)+ whiteSpace+ s <- get+ let ret = runReaderT (genPR fun ln i zs) s+ return ret++-- | Generate one or more production rules from a parsed line.++genPR :: String -> String -> NtIndex -> [Either (String,NtIndex) String] -> ReaderT GS [] PR+genPR f ln i xs = go where+ go = do+ (l,(m,k)) <- genL i+ r <- genR m k xs+ return $ PR [l] r [f]+ genL NoIdx = do+ g <- view grammarUid+ return (Nt 1 [NTSym ln 1 0], (1,0))+ genL (WithVar v 0) = do+ g <- view grammarUid+ m <- views ntsyms (M.! ln)+ k <- lift [0 .. m-1]+ return (Nt 1 [NTSym ln m k], (m,k))+ genL (Range xs) = do+ g <- view grammarUid+ m <- views ntsyms (M.! ln)+ k <- lift xs+ return (Nt 1 [NTSym ln m k], (m,k))+ genR m k [] = do+ return []+ genR m k (Left (n,WithVar k' p) :rs) = do+ let (WithVar v 0) = i+ g <- view grammarUid+ nm <- views ntsyms (M.! n)+ when (v/=k') $ error "oops, index var wrong"+ rs' <- genR m k rs+ return (Nt 1 [NTSym n m ((k+p) `mod` m)] :rs')+ genR m k (Left (n,Range ls) :rs) = do+ g <- view grammarUid+ nm <- views ntsyms (M.! n)+ l <- lift ls+ rs' <- genR m k rs+ return (Nt 1 [NTSym n m l] :rs')+ genR m k (Left (n,NoIdx) :rs) = do+ g <- view grammarUid+ nm <- views ntsyms (M.! n)+ when (nm>1) $ error $ printf "oops, NoIdx given, but indexed NT in: %s" (show (nm,m,k,n,rs))+ rs' <- genR m k rs+ return (Nt 1 [NTSym n 1 0] :rs')+ genR m k (Right t :rs) = do+ g <- view grammarUid+ rs' <- genR m k rs+ return (T 1 [TSym t] :rs')++ruleNts :: ParseU (String,NtIndex)+ruleNts = do+ n <- ident gi <?> "rule: nonterminal identifier"+ i <- nTindex <?> "rule:" -- option ("",1) $ braces ((,) <$> ident gi <*> option 0 integer) <?> "rule: nonterminal index"+ lift $ uses ntsyms (M.member n) >>= guard <?> (printf "undeclared NT: %s" n)+ return (n,i)++nTindex :: ParseG NtIndex+nTindex = option NoIdx+ $ try (braces $ WithVar <$> ident gi <*> option 0 integer)+ <|> try (Range <$> braces (commaSep1 integer))+ <?> "non-terminal index"++data NtIndex+ = WithVar String Integer+ | Range [Integer]+ | NoIdx+ deriving (Show)++ruleTs :: ParseU String+ruleTs = do+ n <- ident gi <?> "rule: terminal identifier"+ lift $ uses tsyms (S.member n) >>= guard <?> (printf "undeclared T: %s" n)+ return n++ntsts :: Parse [Either NTSym TSym]+ntsts = concat <$> some (map Left <$> nts <|> map Right <$> ts)++-- |+--+-- TODO expand @NT@ symbols here or later?++nts :: Parse [NTSym]+nts = do+ reserve gi "NT:"+ n <- ident gi+ mdl <- option 1 $ braces natural+ let zs = map (NTSym n mdl) [0 .. mdl-1]+ ntsyms <>= M.singleton n mdl+ return zs++ts :: Parse [TSym]+ts = do+ reserve gi "T:"+ n <- ident gi+ let z = TSym n+ tsyms <>= S.singleton n+ return [z]++parseDesc = do+ whiteSpace+ {-+ gs <- some grammar+ let g = undefined -- M.fromList $ map ((^. gname) &&& id) gs+ ps <- some (gprod g)+ -}+ gsps <- some (grammar <|> gprod)+ eof+ let (gs,ps) = partition ((==1) . grammarDim) gsps+ return (gs,ps)++gi = set styleReserved rs emptyIdents where+ rs = H.fromList ["Grammar:", "NT:", "T:"]++newtype GrammarLang m a = GrammarLang {runGrammarLang :: m a }+ deriving (Functor,Applicative,Alternative,Monad,MonadPlus,Parsing,CharParsing)++instance MonadTrans GrammarLang where+ lift = GrammarLang+ {-# INLINE lift #-}++instance TokenParsing m => TokenParsing (GrammarLang m) where+ someSpace = GrammarLang $ someSpace `buildSomeSpaceParser` haskellCommentStyle++type Parse a = (Monad m, TokenParsing m, MonadPlus m) => StateT GS m a+type ParseU a = (Monad m, TokenParsing m, MonadPlus m) => Unlined (StateT GS m) a+type ParseG a = (Monad m, TokenParsing m, MonadPlus m) => m a++instance MonadTrans Unlined where+ lift = Unlined+ {-# INLINE lift #-}+-}+
+ GramProd.hs view
@@ -0,0 +1,130 @@+{-# LANGUAGE OverloadedStrings #-}+{-# LANGUAGE RecordWildCards #-}+{-# LANGUAGE DeriveDataTypeable #-}++-- | The @GramProd@ executable reads a grammatical description (from stdin or a+-- file) and produces a set of grammars, each written into a separate file.+--+-- It is possible to both, produce @LaTeX@ and @Haskell@ output. The Haskell+-- grammars require "ADPfusion" to be useful -- and you have to provide+-- algebras that actually evaluate parses.++module Main where++import Control.Lens+import Control.Monad+import Control.Monad.IO.Class+import Control.Monad.Trans.State.Strict+import Data.Default+import Data.Semigroup+import qualified Text.LaTeX.Base.Render as Latex+import System.Console.CmdArgs hiding (def)+import System.IO+import Text.PrettyPrint.ANSI.Leijen as Pretty hiding (line, (<>), (<$>))+import Text.Printf+import Text.Trifecta+import Text.Trifecta.Delta++import FormalLanguage.CFG.Grammar+import FormalLanguage.CFG.PrettyPrint.ANSI+import FormalLanguage.CFG.PrettyPrint.LaTeX+import FormalLanguage.CFG.PrettyPrint.Haskell+import FormalLanguage.GrammarProduct.Parser++++data Options+ = LaTeX+ { inFile :: String+ , outFile ::String+ }+ | Ansi+ { inFile :: String+ }+ | Haskell+ { inFile :: String+ , outFile :: String+ }+ deriving (Show,Data,Typeable)++optionLatex = LaTeX+ { inFile = ""+ , outFile = ""+ }++optionAnsi = Ansi+ { inFile = ""+ }++optionHaskell = Haskell+ { inFile = ""+ , outFile = ""+ }++main = do+ o <- cmdArgs $ modes [optionLatex,optionAnsi,optionHaskell]+ pr <- case (inFile o) of+ "" -> getContents >>= return . parseProduct "stdin"+ fn -> readFile fn >>= return . parseProduct fn+ case pr of+ Failure f -> putStrLn "failed:" >> printDoc f+ Success [] -> error "you did provide input?!"+ Success (s:ss) -> case o of+ LaTeX{..} -> case outFile of+ "" -> error "need to set output file name"+ fn -> renderFile fn $ renderLaTeX 2 s+ Ansi {..} -> printDoc $ grammarDoc s+ Haskell{..} -> case outFile of+ "" -> printDoc $ grammarHaskell s+ fn -> do h <- openFile fn WriteMode+ hPutDoc h $ grammarHaskell s+ hClose h++++{-+main :: IO ()+main = do+ o <- cmdArgs $ modes [optionLatex, optionHaskell]+ let g = runGrammarLang $ flip evalStateT def $ parseDesc+ r <- case infile o of+ "" -> getContents >>= return . parseString g (Directed "stdin" 0 0 0 0)+ fn -> parseFromFileEx g fn+ case r of+ Failure e -> liftIO $ displayIO stdout $ renderPretty 0.8 80 $ e <> linebreak+ Success (gs,ps) -> case o of+ Latex{..} -> do+ let latex g = Latex.renderFile (printf "%s/%s.tex" outdir (g^.gname)) . renderGrammarLaTeX columns $ g+ when withatoms $ mapM_ latex gs+ mapM_ latex ps+ Haskell{..} -> do+ let s = renderGrammarHaskell (if withatoms then gs else [] ++ ps)+ -- writeFile (printf "%s/%s.hs" outdir (g^.gname)) s+ putStrLn s++data Options+ = Latex+ { infile :: String+ , outdir :: String+ , withatoms :: Bool+ , columns :: Int+ }+ | Haskell+ { infile :: String+-- , outdir :: String+ , withatoms :: Bool+ }+ deriving (Show,Data,Typeable)++optionLatex = Latex+ { infile = "" &= help "grammar file to read (stdin if not given)"+ , outdir = "." &= help "directory to put grammars in (./ if not given)"+ , withatoms = False &= help "if set, source grammars (atoms) are written to target, too"+ , columns = 1 &= help "align grammar to 1 or 2 columns?"+ }++optionHaskell = Haskell+ {+ }+-}+
+ GrammarProducts.cabal view
@@ -0,0 +1,116 @@+name: GrammarProducts+version: 0.0.0.2+author: Christian Hoener zu Siederdissen, 2013+copyright: Christian Hoener zu Siederdissen, Ivo L. Hofacker, Peter F. Stadler, 2013+homepage: http://www.tbi.univie.ac.at/~choener/+maintainer: choener@tbi.univie.ac.at+category: Formal Languages, Bioinformatics+license: GPL-3+license-file: LICENSE+build-type: Simple+stability: experimental+cabal-version: >= 1.6.0+synopsis:+ Grammar products and higher-dimensional grammars+description:+ An algebra of liner and context-free grammars.+ .+ This library provides the implementation of our theory of+ algebraic operations over linear and context-free grammars.+ Using algebraic operations, it is possible to construct complex+ dynamic programming algorithms from simpler "atomic" grammars.+ .+ Our most important contribution is the definition of a product+ of grammars which naturally leads to alignment-like algorithms+ on multiple tapes.+ .+ An efficient implementation of the resulting grammars is+ possible via the ADPfusion framework. The @FormalGrammars@+ library provides the required "Template Haskell" machinary.+ .+ Alternatively, the resulting grammars can also be+ pretty-printed in various ways (LaTeX, ANSI, Haskell module+ with signature and grammar).+ .+ .+ .+ Formal background can be found in two papers:+ @+ Christian Höner zu Siederdissen, Ivo L. Hofacker, and Peter F. Stadler+ .+ Product Grammars for Alignment and Folding+ .+ submitted+ @+ .+ and+ .+ @+ Christian Höner zu Siederdissen, Ivo L. Hofacker, and Peter F. Stadler+ .+ How to Multiply Dynamic Programming Algorithms+ .+ Brazilian Symposium on Bioinformatics (BSB 2013)+ .+ Lecture Notes in Bioinformatics 8213, Springer, Heidelberg+ @++++Extra-Source-Files:+ changelog++library+ build-depends:+ base >= 4 && < 5 ,+ ADPfusion >= 0.2.0 ,+ ansi-wl-pprint ,+ bytestring ,+ containers ,+ data-default ,+ FormalGrammars >= 0.0.0.1 ,+ HaTeX ,+ lens ,+ newtype ,+ parsers ,+ PrimitiveArray >= 0.5.1.0 ,+ semigroups ,+ transformers ,+ trifecta+ exposed-modules:+ FormalLanguage.GrammarProduct+ FormalLanguage.GrammarProduct.Op.Add+ FormalLanguage.GrammarProduct.Op.Chomsky+ FormalLanguage.GrammarProduct.Op.Chomsky.Proof+ FormalLanguage.GrammarProduct.Op.Common+ FormalLanguage.GrammarProduct.Op.Greibach+ FormalLanguage.GrammarProduct.Op.Greibach.Proof+ FormalLanguage.GrammarProduct.Op.Linear+ FormalLanguage.GrammarProduct.Op.Power+ FormalLanguage.GrammarProduct.Op.Subtract+ FormalLanguage.GrammarProduct.Parser+-- BioInf.GrammarProducts+-- BioInf.GrammarProducts.Grammar+-- BioInf.GrammarProducts.Haskell+-- BioInf.GrammarProducts.Helper+-- BioInf.GrammarProducts.LaTeX+-- BioInf.GrammarProducts.Tools+-- BioInf.GrammarProducts.TH+ ghc-options:+ -O2++-- With grammar products, we need a refined way of turning input source files+-- into LaTeX and Haskell modules.++executable GrammarProductPP+ build-depends:+ cmdargs == 0.10.*+ main-is:+ GramProd.hs+ ghc-options:+ -O2++source-repository head+ type: git+ location: git://github.com/choener/GrammarProducts+
+ LICENSE view
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+ Setup.hs view
@@ -0,0 +1,2 @@+import Distribution.Simple+main = defaultMain
+ changelog view
@@ -0,0 +1,2 @@+0.0.0.2+ * Products of linear and context-free grammars