EntrezHTTP 1.0.2 → 1.0.3

raw patch · 4 files changed

+31/−4 lines, 4 filesPVP ok

version bump matches the API change (PVP)

API changes (from Hackage documentation)

Files

• EntrezHTTP.cabal +6/−3
• README.md +13/−0
• changelog +11/−0
• src/Bio/EntrezHTTP.hs +1/−1

@@ -7,7 +7,7 @@ -- PVP summary:      +-+------- breaking API changes --                   | | +----- non-breaking API additions --                   | | | +--- code changes with no API change-version:             1.0.2+version:             1.0.3 synopsis:            Libary to interface with the NCBI Entrez REST service. description:         EntrezHTTP provides functions to query the NCBI entrez REST interface.                      .@@ -31,14 +31,17 @@ build-type:          Simple cabal-version:       >=1.8 +Extra-Source-Files:+        README.md changelog+                      source-repository head   type:     git   location: https://github.com/eggzilla/EntrezHTTP  source-repository this   type:     darcs-  location: https://github.com/eggzilla/EntrezHTTP/tree/v1.0.2-  tag:      v1.0.2+  location: https://github.com/eggzilla/EntrezHTTP/tree/1.0.3+  tag:      1.0.3  library   -- Modules exported by the library.

@@ -0,0 +1,13 @@+#EntrezHTTP+[![Hackage](https://img.shields.io/hackage/v/EntrezHTTP.svg)](https://hackage.haskell.org/package/EntrezHTTP) [![Build Status](https://travis-ci.org/eggzilla/EntrezHTTP.svg?branch=master)](https://travis-ci.org/eggzilla/EntrezHTTP)+=========+EntrezHTTP provides functions to query the NCBI entrez REST interface.++There are multiple different databases and tools, so called eutils,+provided by the service.++For more information on Entrez refer to: [Entrez](http://www.ncbi.nlm.nih.gov/gquery/).+ +Information on the webservice can be found at: [NCBI books](http://www.ncbi.nlm.nih.gov/books/NBK25497/).+ +If you plan to include the library in a tool, register it as explained [here](http://www.ncbi.nlm.nih.gov/books/NBK25497/#chapter2.Usage_Guidelines_and_Requiremen).

@@ -0,0 +1,11 @@+-*-change-log-*-+1.0.3 Florian Eggenhofer <egg@informatik.uni-freiburg.de> 12. November 2016+	* Default NCBI URL now uses HTTPS+1.0.2 Florian Eggenhofer <egg@informatik.uni-freiburg.de> 23. October 2016+	* Now compatible with GHC 8.0+	* Travis testing for GHC 7.6 - GHC 8.0+1.0.1 Florian Eggenhofer <florian.eggenhofer@univie.ac.at> 5. January 2016+	* Fixed version constraints, added changelog+1.0.0 Florian Eggenhofer <florian.eggenhofer@univie.ac.at> 11.September 2015+	* Initial version+

@@ -60,7 +60,7 @@  -- | Send query and return response XML sendQuery :: String -> String -> String -> IO L8.ByteString-sendQuery program' database' query' = simpleHttp ("http://eutils.ncbi.nlm.nih.gov/entrez/eutils/"++ program' ++ ".fcgi?" ++ "db=" ++ database' ++ "&" ++ query')         +sendQuery program' database' query' = simpleHttp ("https://eutils.ncbi.nlm.nih.gov/entrez/eutils/"++ program' ++ ".fcgi?" ++ "db=" ++ database' ++ "&" ++ query')           -- | Function for querying the NCBI entrez REST interface. Input EntrezHTTPQuery datatype is used to select database, program of interest and contains the query string. --   Please note that query strings containing whitespace or special characters need to be urlencoded. The response format and content depends on the query type, the output