ClustalParser 1.0.1 → 1.0.2

raw patch · 3 files changed

+6/−6 lines, 3 filesPVP ok

version bump matches the API change (PVP)

API changes (from Hackage documentation)

Files

• ClustalParser.cabal +3/−3
• ClustalParserTest.hs +1/−1
• src/Bio/ClustalParser.hs +2/−2

@@ -5,7 +5,7 @@ -- PVP summary:      +-+------- breaking API changes --                   | | +----- non-breaking API additions --                   | | | +--- code changes with no API change-version:             1.0.1+version:             1.0.2 synopsis:            Libary for parsing Clustal tools output description:         Currently contains parsers and datatypes for: clustalw2, clustalo                      .@@ -30,8 +30,8 @@  source-repository this   type:     git-  location: https://github.com/eggzilla/ClustalParser/tree/1.0.1-  tag:      1.0.1+  location: https://github.com/eggzilla/ClustalParser/tree/1.0.2+  tag:      1.0.2  library   -- Modules exported by the library.

@@ -8,6 +8,6 @@   args <- getArgs   let input_file = (head args)                                        -- read Clustal outputfile-  parsedinput <- readClustalAlignment input_file+  parsedinput <- readStructuralClustalAlignment input_file   print parsedinput  

@@ -231,9 +231,9 @@ genParserStructuralClustalEntrySlice = do   sliceIdentifier <- many1 (noneOf " ")   many1 (char ' ')-  sliceSequence <- many1 (oneOf "UAGCT-")+  sliceSequence <- many1 (oneOf "NUAGCT-")   newline-  return $ StructuralClustalAlignmentEntrySlice sliceIdentifier sliceSequence+  return $ StructuralClustalAlignmentEntrySlice (filter (/='\n') sliceIdentifier) sliceSequence  -- exported functions