BiobaseXNA 0.6.2.5 → 0.6.3.0
raw patch · 4 files changed
+25/−22 lines, 4 filesdep ~PrimitiveArraydep ~file-embeddep ~primitivePVP: major bump suggested
API removals or changes: PVP suggests a major version bump
Dependency ranges changed: PrimitiveArray, file-embed, primitive, vector
API changes (from Hackage documentation)
- Biobase.Secondary.Diagrams: d2Compare :: (Ord t2, Ord t3) => ((t2, t3), t) -> ((t2, t3), t1) -> Ordering
+ Biobase.Secondary.Diagrams: d2Compare :: (Ord t3, Ord t2) => ((t2, t3), t) -> ((t2, t3), t1) -> Ordering
- Biobase.Secondary.Diagrams: d2Grouping :: (Ord a1, Ord a) => ((a, a1), t) -> ((a, a1), t1) -> Bool
+ Biobase.Secondary.Diagrams: d2Grouping :: (Ord a, Ord a1) => ((a, a1), t) -> ((a, a1), t1) -> Bool
Files
- Biobase/Primary.hs +4/−4
- Biobase/Secondary/Constraint.hs +4/−3
- Biobase/Secondary/Vienna.hs +7/−5
- BiobaseXNA.cabal +10/−10
Biobase/Primary.hs view
@@ -20,10 +20,7 @@ module Biobase.Primary where -import "PrimitiveArray" Data.Array.Repa.Index-import "PrimitiveArray" Data.Array.Repa.Shape import Data.Char (toUpper)-import Data.ExtShape import Data.Ix (Ix(..)) import Data.Primitive.Types import Data.Tuple (swap)@@ -35,8 +32,11 @@ import qualified Data.Vector.Generic.Mutable as VGM import qualified Data.Vector.Unboxed as VU +import Data.ExtShape import Data.PrimitiveArray-import Data.PrimitiveArray.Unboxed.Zero+import Data.PrimitiveArray.Zero.Unboxed+import "PrimitiveArray" Data.Array.Repa.Index+import "PrimitiveArray" Data.Array.Repa.Shape import Biobase.Primary.Bounds
Biobase/Secondary/Constraint.hs view
@@ -1,3 +1,4 @@+{-# LANGUAGE PackageImports #-} {-# LANGUAGE FlexibleInstances #-} {-# LANGUAGE TypeSynonymInstances #-} {-# LANGUAGE GeneralizedNewtypeDeriving #-}@@ -6,8 +7,6 @@ module Biobase.Secondary.Constraint where -import Data.Array.Repa.Index-import Data.Array.Repa.Shape import Data.Char (toLower) import Data.Primitive.Types import qualified Data.Vector.Generic as VG@@ -15,7 +14,9 @@ import qualified Data.Vector.Unboxed as VU import Data.PrimitiveArray-import Data.PrimitiveArray.Unboxed.Zero+import Data.PrimitiveArray.Zero.Unboxed+import "PrimitiveArray" Data.Array.Repa.Index+import "PrimitiveArray" Data.Array.Repa.Shape import Biobase.Secondary.Diagrams
Biobase/Secondary/Vienna.hs view
@@ -1,3 +1,4 @@+{-# LANGUAGE PackageImports #-} {-# LANGUAGE TypeOperators #-} {-# LANGUAGE PatternGuards #-} {-# LANGUAGE FlexibleInstances #-}@@ -9,18 +10,19 @@ module Biobase.Secondary.Vienna where -import Data.Array.Repa.Index-import Data.Array.Repa.Shape-import Data.ExtShape import Data.Ix-import Data.PrimitiveArray as PA-import Data.PrimitiveArray.Unboxed.Zero as PA import Data.Primitive.Types import Data.Tuple (swap) import GHC.Base (remInt,quotInt) import qualified Data.Vector.Generic as VG import qualified Data.Vector.Generic.Mutable as VGM import qualified Data.Vector.Unboxed as VU++import Data.ExtShape+import Data.PrimitiveArray as PA+import Data.PrimitiveArray.Zero.Unboxed as PA+import "PrimitiveArray" Data.Array.Repa.Index+import "PrimitiveArray" Data.Array.Repa.Shape import Biobase.Primary import Biobase.Primary.Bounds
BiobaseXNA.cabal view
@@ -1,5 +1,5 @@ name: BiobaseXNA-version: 0.6.2.5+version: 0.6.3.0 author: Christian Hoener zu Siederdissen maintainer: choener@tbi.univie.ac.at homepage: http://www.tbi.univie.ac.at/~choener/@@ -41,15 +41,15 @@ library build-depends: base >3 && <5,- bytestring >= 0.9,- containers >= 0.4,- csv == 0.1.2,- file-embed >= 0.0.4.1,- primitive >= 0.4.1,- text >= 0.11,- tuple >= 0.2,- vector >=0.9 && <0.10,- PrimitiveArray == 0.2.2.0+ bytestring >= 0.9 ,+ containers >= 0.4 ,+ csv == 0.1.2 ,+ file-embed >= 0.0.4 ,+ primitive >= 0.4 ,+ text >= 0.11 ,+ tuple >= 0.2 ,+ vector >= 0.10 ,+ PrimitiveArray == 0.4.0.0 exposed-modules: Biobase.Primary