BiobaseXNA 0.5.5.0 → 0.5.6.0

raw patch · 2 files changed

+10/−3 lines, 2 filesPVP ok

version bump matches the API change (PVP)

API changes (from Hackage documentation)

Files

• Biobase/Secondary/Isostericity.hs +4/−1
• BiobaseXNA.cabal +6/−2

@@ -15,6 +15,7 @@  import Data.ByteString.Char8 (ByteString) import Data.FileEmbed (embedFile)+import Data.Function (on) import Data.List import qualified Data.ByteString.Char8 as BS import qualified Data.Map as M@@ -77,7 +78,8 @@  -- | Process CSV list-of-lists to get the isostericity data. -mkIsostericityList gs = concatMap f gs where+mkIsostericityList :: [[[String]]] -> [(ExtPair, [String])]+mkIsostericityList gs = nubBy ((==) `on` fst) . concatMap turn . concatMap f $ gs where   f g = map (\e ->  ( ( let [x,y] = fst e                         in (mkNuc x, mkNuc y), threeChar bpt                       )@@ -86,6 +88,7 @@     bpt = head $ head g     xs = tail g     entry x = (x!!0, takeWhile ((=='I') . head) $ drop 2 x)+  turn entry@(((x,y),(wc,tx,ty)), cs) = [entry, (((y,x),(wc,ty,tx)), cs)]  -- | Simple parsing of raw CSV data. 

@@ -1,5 +1,5 @@ name:           BiobaseXNA-version:        0.5.5.0+version:        0.5.6.0 author:         Christian Hoener zu Siederdissen maintainer:     choener@tbi.univie.ac.at homepage:       http://www.tbi.univie.ac.at/~choener/@@ -26,9 +26,13 @@                 .                 Nucl. Acids Res. (2009)                 .-                doi:10.1093/nar/gkp011+                <http://dx.crossref.org/10.1093%2Fnar%2Fgkp011>                 .                 .+                .+                Changes since 0.5.5.0+                .+                * isostericity for the 6 "missing" classes                 .                 Changes since 0.5.4.0                 .